| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183220160
Identifier: 183220160
GI number: 183220160
Start: 765558
End: 766484
Strand: Direct
Name: 183220160
Synonym: LEPBI_I0748
Alternate gene names: NA
Gene position: 765558-766484 (Clockwise)
Preceding gene: 183220159
Following gene: 183220161
Centisome position: 21.27
GC content: 37.32
Gene sequence:
>927_bases ATGGGATCTTTTTTCACTATCGATACTGAATACGCCAACCTCAAACAAGTAGCTTCAGCATACCTTATAGAAGAGGAAGG GTATGGAATTGTCATTGAGACAAACACAACCCATGCCATTCCCAAAATTCTTTCTGCTATGGAACAAAACCACGTTGATG TGACTCGTTTAGAATACATCATTGTGACACATGTTCACTTAGACCATGCGGGTGGGGCTTGGTTACTGCTAGAAAAATGC CCCAATGCTATGTTACTTGCCCATCCAAAAACCGCCAAACATTTGATAGACCCAAGCCTACTCATTAAAAGCGCAACATC AGTATATGGAAAAGAAAATTTCCAAAAATTGTATGGGGAAATCAAACCCATACCGAAAGAAAGAGTTCGAGTGATGGAAA ATGGTGAGTTTTTGGATTGGAGGGGTCATCATTTTGAATTTATTTATACTAAGGGACATGCGAATCATCACTTCTGTATC TATGATCAAACTTTAAACGGAGTATTTACAGGTGATTCGTTTGGAATTTCTTACCCTCACTTGGAAAATGGGAAATCTTT TATTTTCCCAACTACCACACCCACAGACTTTGATGCAAAAGAGGCCATGCATTCGATAGATATGATATTGTCAACTGGAG CTAATGTTTGTTATTTGACCCATTTTGGACCTATTCAAAACTTGAAACATTGTGCTGATGATCTAAAGGAAGGTTTACGC CATTGCCAAAATGCAATTTTGGAATTAAAAGAAATTCCCAAAGAAAATCGGCTTTCCTTTATGGAAAAAAAAGTGAAAAT CATGATCCAATCATTGGCGAATCAAAATGATGTGATTCTCACAGAAAAAGATTGGTCTCTCTTAGATTTAGATGTGAATT TGAATGCACAAGGTTTGGTGTATGCGTTTGAGAAATCAGAAAGATGA
Upstream 100 bases:
>100_bases ATGAGTGATCGAAGAAATTCCATTTTGAAATTGTTGATTCGAAATATTGGATGAAAAGAATTTAGGCTGACAAAGAGATT TCCTGAATTTACCTTATGGT
Downstream 100 bases:
>100_bases TCTTACACCCAATCCTCTAAAAAGGATTGGTATCATTTTCTGGATTACCCTCTCCATCTTTGCCTTTAGTTTCCTAGTAC TTGGAAATTGTAATTCCTAT
Product: putative metallo-beta-lactamase superfamily protein
Products: NA
Alternate protein names: Beta-Lactamase Domain Protein; Beta-Lactamase-Like Protein; Metallo-Beta-Lactamase Family Protein; Metallo-Beta-Lactamase Superfamily Protein; Zn-Dependent Hydrolase; Beta-Lactamase-Like; Beta-Lactamase Related Protein; Metallo-Beta-Lactamase Family Hydrolase; Metallo-Beta-Lactamase-Related Protein; Zn-Dependent Hydrolase Including Glyoxylase; Zn-Dependent Hydrolase Glyoxylase; Metallo-Beta-Lactamase; Hydroxyacylglutathione Hydrolase; Zinc-Dependant Hydrolase; Metallo-Beta-Lactamase Related Protein; Metallo Beta-Lactamase Protein; Metallo-Beta-Lactamase Domain Protein; Hydrolase; Zn-Dependent Hydrolases Including Glyoxylases
Number of amino acids: Translated: 308; Mature: 307
Protein sequence:
>308_residues MGSFFTIDTEYANLKQVASAYLIEEEGYGIVIETNTTHAIPKILSAMEQNHVDVTRLEYIIVTHVHLDHAGGAWLLLEKC PNAMLLAHPKTAKHLIDPSLLIKSATSVYGKENFQKLYGEIKPIPKERVRVMENGEFLDWRGHHFEFIYTKGHANHHFCI YDQTLNGVFTGDSFGISYPHLENGKSFIFPTTTPTDFDAKEAMHSIDMILSTGANVCYLTHFGPIQNLKHCADDLKEGLR HCQNAILELKEIPKENRLSFMEKKVKIMIQSLANQNDVILTEKDWSLLDLDVNLNAQGLVYAFEKSER
Sequences:
>Translated_308_residues MGSFFTIDTEYANLKQVASAYLIEEEGYGIVIETNTTHAIPKILSAMEQNHVDVTRLEYIIVTHVHLDHAGGAWLLLEKC PNAMLLAHPKTAKHLIDPSLLIKSATSVYGKENFQKLYGEIKPIPKERVRVMENGEFLDWRGHHFEFIYTKGHANHHFCI YDQTLNGVFTGDSFGISYPHLENGKSFIFPTTTPTDFDAKEAMHSIDMILSTGANVCYLTHFGPIQNLKHCADDLKEGLR HCQNAILELKEIPKENRLSFMEKKVKIMIQSLANQNDVILTEKDWSLLDLDVNLNAQGLVYAFEKSER >Mature_307_residues GSFFTIDTEYANLKQVASAYLIEEEGYGIVIETNTTHAIPKILSAMEQNHVDVTRLEYIIVTHVHLDHAGGAWLLLEKCP NAMLLAHPKTAKHLIDPSLLIKSATSVYGKENFQKLYGEIKPIPKERVRVMENGEFLDWRGHHFEFIYTKGHANHHFCIY DQTLNGVFTGDSFGISYPHLENGKSFIFPTTTPTDFDAKEAMHSIDMILSTGANVCYLTHFGPIQNLKHCADDLKEGLRH CQNAILELKEIPKENRLSFMEKKVKIMIQSLANQNDVILTEKDWSLLDLDVNLNAQGLVYAFEKSER
Specific function: Unknown
COG id: COG0491
COG function: function code R; Zn-dependent hydrolases, including glyoxylases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34990; Mature: 34859
Theoretical pI: Translated: 6.26; Mature: 6.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGSFFTIDTEYANLKQVASAYLIEEEGYGIVIETNTTHAIPKILSAMEQNHVDVTRLEYI CCCEEEEECCHHHHHHHHHHHEEECCCCEEEEECCCCHHHHHHHHHHHHCCCCCEEEEEE IVTHVHLDHAGGAWLLLEKCPNAMLLAHPKTAKHLIDPSLLIKSATSVYGKENFQKLYGE EEEEEEEECCCCEEEEEECCCCCEEEECCCHHHHHCCHHHHHHHHHHHHCHHHHHHHHHH IKPIPKERVRVMENGEFLDWRGHHFEFIYTKGHANHHFCIYDQTLNGVFTGDSFGISYPH CCCCCHHHHHHHCCCCEEEECCCEEEEEEEECCCCCEEEEEECCCCCEEECCCCCCCCCC LENGKSFIFPTTTPTDFDAKEAMHSIDMILSTGANVCYLTHFGPIQNLKHCADDLKEGLR CCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHH HCQNAILELKEIPKENRLSFMEKKVKIMIQSLANQNDVILTEKDWSLLDLDVNLNAQGLV HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCEEEEEEECCCCCEEE YAFEKSER EEEECCCC >Mature Secondary Structure GSFFTIDTEYANLKQVASAYLIEEEGYGIVIETNTTHAIPKILSAMEQNHVDVTRLEYI CCEEEEECCHHHHHHHHHHHEEECCCCEEEEECCCCHHHHHHHHHHHHCCCCCEEEEEE IVTHVHLDHAGGAWLLLEKCPNAMLLAHPKTAKHLIDPSLLIKSATSVYGKENFQKLYGE EEEEEEEECCCCEEEEEECCCCCEEEECCCHHHHHCCHHHHHHHHHHHHCHHHHHHHHHH IKPIPKERVRVMENGEFLDWRGHHFEFIYTKGHANHHFCIYDQTLNGVFTGDSFGISYPH CCCCCHHHHHHHCCCCEEEECCCEEEEEEEECCCCCEEEEEECCCCCEEECCCCCCCCCC LENGKSFIFPTTTPTDFDAKEAMHSIDMILSTGANVCYLTHFGPIQNLKHCADDLKEGLR CCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHH HCQNAILELKEIPKENRLSFMEKKVKIMIQSLANQNDVILTEKDWSLLDLDVNLNAQGLV HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCEEEEEEECCCCCEEE YAFEKSER EEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA