| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is pbpX [H]
Identifier: 183220093
GI number: 183220093
Start: 688380
End: 690368
Strand: Direct
Name: pbpX [H]
Synonym: LEPBI_I0681
Alternate gene names: 183220093
Gene position: 688380-690368 (Clockwise)
Preceding gene: 183220092
Following gene: 183220097
Centisome position: 19.12
GC content: 40.82
Gene sequence:
>1989_bases TTGCATAGCGATCACTCCCCAATCCGTAGGTTTGGGGAGTTTTGTTTTTTATGGGCTTGTTCCAGGATCGAATCCTTTTT TTCTTGGGGTATGAAATCGAAGAAAGTGCAAAAGATTCATTCTCATCACAAAAAGGAAACCGAATCCTTACCAAAAATAA ACCCTTCCCGAATTGAATCTGTAAAGGCCAAAGCCAAAACCAAATCTCCGAATCTCGATCCCATTTTCCCTTTCCGACTC ATCTTTGTATTTTTTTTCACACTGCTTATCCAATGCCAAACCAGTGGAGATTCATCTCTTCCCCTCGCCACACAAAAGAA AAACCAAATCCATAAGGAAATTGTATCGAAATGGGAATCCCTTTCACCTTCATCGATCAAATCCTTAACCTATCTTTACA TTATGGGAGATGGAGAAGTCCATTCAGGTCAAATTGGGAATCAGACGGAAGGCAAAGTGGATCGTTTTAAAATTGGGAGC ATTTCAAAACTATTCACAGGGATAGCGATCTTGCAGTTACAAGACTCCGGTAAACTCAAGTTAGATGATCCTGTATCCAT TTATCTCCCTGAAATCAAAATGGTAAAACCAAAAATACAAGGTTACCGTGAAATCACCATCCGCGACCTTTTGACCCACC AGTCAGGCCTTCCTTCGGACTTGGCCAAGGGATTTTTTTTACCACCAGATGCCAAAGAAGAAACCATCTTAGAATCCTTT CGAGCTTTACCAAATTCTCTTGCCAGTATGGAACGAAATGAACCTGGAAAAATTCACTCCTATTCCAATTTAAGTTTTGG TCTTTTGGGGAATATCATTGAACGCTCGTCAGGTGAACCGATCGAAGTTTATTTCCAAAAACATATCTTTGAAAAGGCGG GGATGAAACATACGACCTTACTTGAGTCCTTACCAAATTCCGAATTGATTTCTGGGTATTCCGGTTTGTTTTGGAAAACC CAAACCATCCGTCCTGTGATCCGCGATTTGACAGCGGGTTCCATATCGACAACGGGAGAAGATATGGGTCTTTTTATGAA GGCATTTTTTAAGAGTAAAGAAAACAAAGGCCTTTTCAGTTCAGAGAGTTTTGAAGAATTCCACAGGTCACAACCTGGCC CCACCTCCAATTTTGACATGAAACTTGGGTTACCCGTTCTCAAAACAAGTTACGAAGCAGATGGCAAAATCATTTGGTTT TATGGACATTCCGGATCCTTGCCTCCATTTTTTGCTGACTTAATTTATGATCCCCAAACAGAAATTGTATCCTTTGTTGC TGGCAACACTCTTGGACTCCAAACTGGAAGTTTAAAAGAAACCAACACAAAGGTGATGGAGCTATTATGGGAAGAAAGAA TGGGGCTTCGTCCAGAACCAAGTCCGCTTCCTACACCACAAAACAAAGAATTAGTGAAAGGAGAGAATGGTTTTTACATC TCTCCTTTTGGAATCCATGAATACAAAGAGGGAACTCCACCTACTCTCAGTTTAACGGGGTTTGATCTGGGCCTTGTGGA AAGGGAAAAACGATATGGCATCGATTTGCGAGTGTTTTTTGGCCTCATTAAAATCAATGATCCTCAACTGAACGAAATTC GGATCGAATTTGAATCTTGGGAAGGGAATCCCATCTTTACATTGTATTCCAAAGGTTTGCCAAAAGGAACAGCCGGGATT GGTGTGAAATTTCTCCCAGACCATAAGTTCCCTGATTCCCAATTTTTTGGAACCTTTGTGACAAAAGAACCCTATGCCAT TGTTCCCAAACTCAAATTGGAAAAAGACAAACGTGGATTTCCGTTATTAACGATCTACTATATGTTAGGTGGAATGGAAA ATACAATCCAAGTCCCTTGCCAATGGGAAGGAGGGAAAACTCTTCGTATTTTAGGCTATGGTAGGAATTTGGGGGAGCGG ATCGAACTTCGTGAAAAGGATGGAAAATCAATACTTTTGTATTCAGGTGGGGAGTATGAAAAGGATTGA
Upstream 100 bases:
>100_bases CGATGAGTGTGATCCAAGACTAAAACAGATTGCCACTCCTCTAGAATCGTTCCAACAAACAGAGTCCAGACGAAAGGACT CGATTGTTGTTCTTTCTCTT
Downstream 100 bases:
>100_bases ATATAAAAAAAGCGGAGAGTTTCATCTCCGCTTTCTCATTGATTGGAACCTCTTGTTTAGAACAAAAAGATTCGTTTCAA CTAACGATTGGTATCGTTAT
Product: putative penicillin binding protein, beta-lactamase class C
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 662; Mature: 662
Protein sequence:
>662_residues MHSDHSPIRRFGEFCFLWACSRIESFFSWGMKSKKVQKIHSHHKKETESLPKINPSRIESVKAKAKTKSPNLDPIFPFRL IFVFFFTLLIQCQTSGDSSLPLATQKKNQIHKEIVSKWESLSPSSIKSLTYLYIMGDGEVHSGQIGNQTEGKVDRFKIGS ISKLFTGIAILQLQDSGKLKLDDPVSIYLPEIKMVKPKIQGYREITIRDLLTHQSGLPSDLAKGFFLPPDAKEETILESF RALPNSLASMERNEPGKIHSYSNLSFGLLGNIIERSSGEPIEVYFQKHIFEKAGMKHTTLLESLPNSELISGYSGLFWKT QTIRPVIRDLTAGSISTTGEDMGLFMKAFFKSKENKGLFSSESFEEFHRSQPGPTSNFDMKLGLPVLKTSYEADGKIIWF YGHSGSLPPFFADLIYDPQTEIVSFVAGNTLGLQTGSLKETNTKVMELLWEERMGLRPEPSPLPTPQNKELVKGENGFYI SPFGIHEYKEGTPPTLSLTGFDLGLVEREKRYGIDLRVFFGLIKINDPQLNEIRIEFESWEGNPIFTLYSKGLPKGTAGI GVKFLPDHKFPDSQFFGTFVTKEPYAIVPKLKLEKDKRGFPLLTIYYMLGGMENTIQVPCQWEGGKTLRILGYGRNLGER IELREKDGKSILLYSGGEYEKD
Sequences:
>Translated_662_residues MHSDHSPIRRFGEFCFLWACSRIESFFSWGMKSKKVQKIHSHHKKETESLPKINPSRIESVKAKAKTKSPNLDPIFPFRL IFVFFFTLLIQCQTSGDSSLPLATQKKNQIHKEIVSKWESLSPSSIKSLTYLYIMGDGEVHSGQIGNQTEGKVDRFKIGS ISKLFTGIAILQLQDSGKLKLDDPVSIYLPEIKMVKPKIQGYREITIRDLLTHQSGLPSDLAKGFFLPPDAKEETILESF RALPNSLASMERNEPGKIHSYSNLSFGLLGNIIERSSGEPIEVYFQKHIFEKAGMKHTTLLESLPNSELISGYSGLFWKT QTIRPVIRDLTAGSISTTGEDMGLFMKAFFKSKENKGLFSSESFEEFHRSQPGPTSNFDMKLGLPVLKTSYEADGKIIWF YGHSGSLPPFFADLIYDPQTEIVSFVAGNTLGLQTGSLKETNTKVMELLWEERMGLRPEPSPLPTPQNKELVKGENGFYI SPFGIHEYKEGTPPTLSLTGFDLGLVEREKRYGIDLRVFFGLIKINDPQLNEIRIEFESWEGNPIFTLYSKGLPKGTAGI GVKFLPDHKFPDSQFFGTFVTKEPYAIVPKLKLEKDKRGFPLLTIYYMLGGMENTIQVPCQWEGGKTLRILGYGRNLGER IELREKDGKSILLYSGGEYEKD >Mature_662_residues MHSDHSPIRRFGEFCFLWACSRIESFFSWGMKSKKVQKIHSHHKKETESLPKINPSRIESVKAKAKTKSPNLDPIFPFRL IFVFFFTLLIQCQTSGDSSLPLATQKKNQIHKEIVSKWESLSPSSIKSLTYLYIMGDGEVHSGQIGNQTEGKVDRFKIGS ISKLFTGIAILQLQDSGKLKLDDPVSIYLPEIKMVKPKIQGYREITIRDLLTHQSGLPSDLAKGFFLPPDAKEETILESF RALPNSLASMERNEPGKIHSYSNLSFGLLGNIIERSSGEPIEVYFQKHIFEKAGMKHTTLLESLPNSELISGYSGLFWKT QTIRPVIRDLTAGSISTTGEDMGLFMKAFFKSKENKGLFSSESFEEFHRSQPGPTSNFDMKLGLPVLKTSYEADGKIIWF YGHSGSLPPFFADLIYDPQTEIVSFVAGNTLGLQTGSLKETNTKVMELLWEERMGLRPEPSPLPTPQNKELVKGENGFYI SPFGIHEYKEGTPPTLSLTGFDLGLVEREKRYGIDLRVFFGLIKINDPQLNEIRIEFESWEGNPIFTLYSKGLPKGTAGI GVKFLPDHKFPDSQFFGTFVTKEPYAIVPKLKLEKDKRGFPLLTIYYMLGGMENTIQVPCQWEGGKTLRILGYGRNLGER IELREKDGKSILLYSGGEYEKD
Specific function: Binds Penicillin And Contributes To The Normal Morphology Of Escherichia Coli. [C]
COG id: COG1680
COG function: function code V; Beta-lactamase class C and other penicillin binding proteins
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein (Potential). Note=Localizes to the division septum during vegetative growth, and accumulates at the prespore during sporulation [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the beta-lactamase family [H]
Homologues:
Organism=Escherichia coli, GI1786574, Length=210, Percent_Identity=30.952380952381, Blast_Score=74, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012338 - InterPro: IPR001466 [H]
Pfam domain/function: PF00144 Beta-lactamase [H]
EC number: NA
Molecular weight: Translated: 74747; Mature: 74747
Theoretical pI: Translated: 8.84; Mature: 8.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHSDHSPIRRFGEFCFLWACSRIESFFSWGMKSKKVQKIHSHHKKETESLPKINPSRIES CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHH VKAKAKTKSPNLDPIFPFRLIFVFFFTLLIQCQTSGDSSLPLATQKKNQIHKEIVSKWES HHHHHHCCCCCCCCCHHHHHHHHHHHHHHEEEECCCCCCCCCCCHHHHHHHHHHHHHHHC LSPSSIKSLTYLYIMGDGEVHSGQIGNQTEGKVDRFKIGSISKLFTGIAILQLQDSGKLK CCCCHHCEEEEEEEEECCCEECCCCCCCCCCCCCEEECCCHHHHHHCEEEEEEECCCCEE LDDPVSIYLPEIKMVKPKIQGYREITIRDLLTHQSGLPSDLAKGFFLPPDAKEETILESF ECCCCEEEECCEEEECHHHCCHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCHHHHHHHH RALPNSLASMERNEPGKIHSYSNLSFGLLGNIIERSSGEPIEVYFQKHIFEKAGMKHTTL HHHHHHHHHHCCCCCCCEEECCCCCHHHHHHHHHCCCCCCEEHHHHHHHHHHCCCHHHHH LESLPNSELISGYSGLFWKTQTIRPVIRDLTAGSISTTGEDMGLFMKAFFKSKENKGLFS HHHCCCHHHHCCCCCCEEEHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCC SESFEEFHRSQPGPTSNFDMKLGLPVLKTSYEADGKIIWFYGHSGSLPPFFADLIYDPQT CCHHHHHHCCCCCCCCCCCEEECCHHHHCCCCCCCEEEEEECCCCCCCHHHHHHHCCCHH EIVSFVAGNTLGLQTGSLKETNTKVMELLWEERMGLRPEPSPLPTPQNKELVKGENGFYI HHHHHHCCCEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEECCCCEEE SPFGIHEYKEGTPPTLSLTGFDLGLVEREKRYGIDLRVFFGLIKINDPQLNEIRIEFESW CCCCCHHCCCCCCCEEEEECCCCCHHHHHHHCCCEEEEEEEEEEECCCCCEEEEEEEECC EGNPIFTLYSKGLPKGTAGIGVKFLPDHKFPDSQFFGTFVTKEPYAIVPKLKLEKDKRGF CCCEEEEEECCCCCCCCCCCCEEECCCCCCCCCHHCEEEECCCCEEECCCEEECCCCCCC PLLTIYYMLGGMENTIQVPCQWEGGKTLRILGYGRNLGERIELREKDGKSILLYSGGEYE CCEEHHHHHCCCCCEEEEEEEECCCCEEEEEEECCCCCCCEEEEECCCCEEEEEECCCCC KD CC >Mature Secondary Structure MHSDHSPIRRFGEFCFLWACSRIESFFSWGMKSKKVQKIHSHHKKETESLPKINPSRIES CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHH VKAKAKTKSPNLDPIFPFRLIFVFFFTLLIQCQTSGDSSLPLATQKKNQIHKEIVSKWES HHHHHHCCCCCCCCCHHHHHHHHHHHHHHEEEECCCCCCCCCCCHHHHHHHHHHHHHHHC LSPSSIKSLTYLYIMGDGEVHSGQIGNQTEGKVDRFKIGSISKLFTGIAILQLQDSGKLK CCCCHHCEEEEEEEEECCCEECCCCCCCCCCCCCEEECCCHHHHHHCEEEEEEECCCCEE LDDPVSIYLPEIKMVKPKIQGYREITIRDLLTHQSGLPSDLAKGFFLPPDAKEETILESF ECCCCEEEECCEEEECHHHCCHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCHHHHHHHH RALPNSLASMERNEPGKIHSYSNLSFGLLGNIIERSSGEPIEVYFQKHIFEKAGMKHTTL HHHHHHHHHHCCCCCCCEEECCCCCHHHHHHHHHCCCCCCEEHHHHHHHHHHCCCHHHHH LESLPNSELISGYSGLFWKTQTIRPVIRDLTAGSISTTGEDMGLFMKAFFKSKENKGLFS HHHCCCHHHHCCCCCCEEEHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCC SESFEEFHRSQPGPTSNFDMKLGLPVLKTSYEADGKIIWFYGHSGSLPPFFADLIYDPQT CCHHHHHHCCCCCCCCCCCEEECCHHHHCCCCCCCEEEEEECCCCCCCHHHHHHHCCCHH EIVSFVAGNTLGLQTGSLKETNTKVMELLWEERMGLRPEPSPLPTPQNKELVKGENGFYI HHHHHHCCCEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEECCCCEEE SPFGIHEYKEGTPPTLSLTGFDLGLVEREKRYGIDLRVFFGLIKINDPQLNEIRIEFESW CCCCCHHCCCCCCCEEEEECCCCCHHHHHHHCCCEEEEEEEEEEECCCCCEEEEEEEECC EGNPIFTLYSKGLPKGTAGIGVKFLPDHKFPDSQFFGTFVTKEPYAIVPKLKLEKDKRGF CCCEEEEEECCCCCCCCCCCCEEECCCCCCCCCHHCEEEECCCCEEECCCEEECCCCCCC PLLTIYYMLGGMENTIQVPCQWEGGKTLRILGYGRNLGERIELREKDGKSILLYSGGEYE CCEEHHHHHCCCCCEEEEEEEECCCCEEEEEEECCCCCCCEEEEECCCCEEEEEECCCCC KD CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]