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The map label for this gene is ychA [C]

Identifier: 183220058

GI number: 183220058

Start: 649608

End: 650501

Strand: Direct

Name: ychA [C]

Synonym: LEPBI_I0645

Alternate gene names: 183220058

Gene position: 649608-650501 (Clockwise)

Preceding gene: 183220057

Following gene: 183220059

Centisome position: 18.05

GC content: 37.81

Gene sequence:

>894_bases
ATGGGACAAAACTCTTTTCCTGATTTTTACCCGGATGATATCACTCGTTTATTGTATGATTGGGAAGTTGCTCCTGCAGA
AAAAAAACGTTTTCTCTTAAAACTCATTGCATCTCGTATTCCTTGGCAAATTCAATTGGAATCTGCCTTGGATGAAGTGA
AAGATCCATACCTTCGAGTACAAGCTCGGAATCTTAAATCAGAAATCCTTCGCCATCGTCTTAGGCATTCCTTCTTCAAA
CTCACGTTACGTGGGAATACAAATCATTATAAAGATTTGGAAGAGATGGTGGTCCAACTTTCTAATATTGGATTTCCTGA
TCAAAATTATGCAGAGATCAAACATGAATTGGATCGGATTGCACTTCGCATTTCTGAGTTATACGATGATCATTCTGGTT
ATTTAACAGACGAACTCAAAGTACAAATCCTTTGCCAAGTGATGTTCCAAGAAGAGGGTTTTGTTGGCAACATCCAAAGT
TATAATGATCCAGGAAATTCTTATGTATTCCAAGTGATGAAAAGTCGACTTGGCATTCCCATTTCATTATCTGTTGTGTA
TCTACTGGTGGCGCAACGGCTTGGTCTTCCTTTATATGGAACAAACCTCCCACTCCATTTCCTATTACAGTATGAATCCG
AAGGCTATTTTACCTACATCGATCCATTCCATGGTGGCGTTTTATTAGATAAATTCACTTGTGAAAAATTTTTAGAAGCG
AATGGATATACCAATTCTCCCAAGTATTTCACGAAAGCATCCACACTTTCTATGATCAAACGGATGTGTCGTAATTTACT
CCATATCTATCGCGACAATCAGTCCAAAGAAATGGAACATATGATTAAGGATCATCTTCAGATTCTCGAAAGTCGATCCA
CTCATGTGGAATAA

Upstream 100 bases:

>100_bases
CACTCCACCAAATAAAGAACAAGAAGCACAAGCTCTTGCAGAATTAGCTTAAAGTTTTTGTTTCGATTGACTTTTTCATT
TTAAGTTAGATAGTTTTAGC

Downstream 100 bases:

>100_bases
CGGATGAAGTCAAAGATTAAGATCCAATCTGTACTGTCCAAATTTGATAAAAATTTAGACAGTATCATTCACGAAGACAT
TCCCATCCTTAAAAAAATAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 297; Mature: 296

Protein sequence:

>297_residues
MGQNSFPDFYPDDITRLLYDWEVAPAEKKRFLLKLIASRIPWQIQLESALDEVKDPYLRVQARNLKSEILRHRLRHSFFK
LTLRGNTNHYKDLEEMVVQLSNIGFPDQNYAEIKHELDRIALRISELYDDHSGYLTDELKVQILCQVMFQEEGFVGNIQS
YNDPGNSYVFQVMKSRLGIPISLSVVYLLVAQRLGLPLYGTNLPLHFLLQYESEGYFTYIDPFHGGVLLDKFTCEKFLEA
NGYTNSPKYFTKASTLSMIKRMCRNLLHIYRDNQSKEMEHMIKDHLQILESRSTHVE

Sequences:

>Translated_297_residues
MGQNSFPDFYPDDITRLLYDWEVAPAEKKRFLLKLIASRIPWQIQLESALDEVKDPYLRVQARNLKSEILRHRLRHSFFK
LTLRGNTNHYKDLEEMVVQLSNIGFPDQNYAEIKHELDRIALRISELYDDHSGYLTDELKVQILCQVMFQEEGFVGNIQS
YNDPGNSYVFQVMKSRLGIPISLSVVYLLVAQRLGLPLYGTNLPLHFLLQYESEGYFTYIDPFHGGVLLDKFTCEKFLEA
NGYTNSPKYFTKASTLSMIKRMCRNLLHIYRDNQSKEMEHMIKDHLQILESRSTHVE
>Mature_296_residues
GQNSFPDFYPDDITRLLYDWEVAPAEKKRFLLKLIASRIPWQIQLESALDEVKDPYLRVQARNLKSEILRHRLRHSFFKL
TLRGNTNHYKDLEEMVVQLSNIGFPDQNYAEIKHELDRIALRISELYDDHSGYLTDELKVQILCQVMFQEEGFVGNIQSY
NDPGNSYVFQVMKSRLGIPISLSVVYLLVAQRLGLPLYGTNLPLHFLLQYESEGYFTYIDPFHGGVLLDKFTCEKFLEAN
GYTNSPKYFTKASTLSMIKRMCRNLLHIYRDNQSKEMEHMIKDHLQILESRSTHVE

Specific function: Unknown

COG id: COG2912

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 TPR repeats [H]

Homologues:

Organism=Homo sapiens, GI16306502, Length=162, Percent_Identity=31.4814814814815, Blast_Score=73, Evalue=3e-13,
Organism=Homo sapiens, GI16306500, Length=162, Percent_Identity=31.4814814814815, Blast_Score=73, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR019734 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34840; Mature: 34709

Theoretical pI: Translated: 6.74; Mature: 6.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGQNSFPDFYPDDITRLLYDWEVAPAEKKRFLLKLIASRIPWQIQLESALDEVKDPYLRV
CCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCEEEEHHHHHHHHCCCCEEH
QARNLKSEILRHRLRHSFFKLTLRGNTNHYKDLEEMVVQLSNIGFPDQNYAEIKHELDRI
HHHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
ALRISELYDDHSGYLTDELKVQILCQVMFQEEGFVGNIQSYNDPGNSYVFQVMKSRLGIP
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCEECCCCCCCCCHHHHHHHHHHHCCCC
ISLSVVYLLVAQRLGLPLYGTNLPLHFLLQYESEGYFTYIDPFHGGVLLDKFTCEKFLEA
HHHHHHHHHHHHHHCCCEECCCCCEEEEEEECCCCCEEEECCCCCCEEEHHHHHHHHHHC
NGYTNSPKYFTKASTLSMIKRMCRNLLHIYRDNQSKEMEHMIKDHLQILESRSTHVE
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
GQNSFPDFYPDDITRLLYDWEVAPAEKKRFLLKLIASRIPWQIQLESALDEVKDPYLRV
CCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCEEEEHHHHHHHHCCCCEEH
QARNLKSEILRHRLRHSFFKLTLRGNTNHYKDLEEMVVQLSNIGFPDQNYAEIKHELDRI
HHHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
ALRISELYDDHSGYLTDELKVQILCQVMFQEEGFVGNIQSYNDPGNSYVFQVMKSRLGIP
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCEECCCCCCCCCHHHHHHHHHHHCCCC
ISLSVVYLLVAQRLGLPLYGTNLPLHFLLQYESEGYFTYIDPFHGGVLLDKFTCEKFLEA
HHHHHHHHHHHHHHCCCEECCCCCEEEEEEECCCCCEEEECCCCCCEEEHHHHHHHHHHC
NGYTNSPKYFTKASTLSMIKRMCRNLLHIYRDNQSKEMEHMIKDHLQILESRSTHVE
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10910347 [H]