Definition Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence.
Accession NC_010602
Length 3,599,677

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The map label for this gene is 183220027

Identifier: 183220027

GI number: 183220027

Start: 616127

End: 617809

Strand: Direct

Name: 183220027

Synonym: LEPBI_I0612

Alternate gene names: NA

Gene position: 616127-617809 (Clockwise)

Preceding gene: 183220026

Following gene: 183220028

Centisome position: 17.12

GC content: 33.81

Gene sequence:

>1683_bases
TTGAATTCCATTCCATCTGGAAACAATTACGGTGATATGAAACGGAAATCACTCATTTTACTCACTTTAATTTTGCTCAT
TGTGGTTCATTGCCGCAAAAAAACAGAAGAGATCCTTCTACCCGAAAAACTATACATAATTCCATTTGCGAATAACACCG
TTTCCATTTACCATTCCTTAGATACCTTGGAAAGAGTGAGCGCCTTTGAAAAAGACAAATATTGGGTTGTCAGTGGGATT
TTGAAATTAGTTCCTAAAAATCAAGGTGATAAGGTAATCTCATTTTTATTTGGTGATTGTGATTCAAGATTTAAATGTAC
GGATGGAAAATTTTATATCAAATTAAATACAATCCAATATAACGCTGATGCAGGGTTGGATTTACAAACAAATTTGGTCG
CGCCTTTTTCTCCAGTCTACATTGCCAAAAAAGACCAAGTAGATTCCATTATAGAAGGTATCCAATTTTATAACCAACCT
TCATCAGAATATCCATCGAAAGGATTAAGCGATTCATTTGTTGATCATATGGTTCAAGTCAACAAATCCCTTGCTTATCA
TGATAAAAATGAATTTCTAATTCCATTTTATGTTTTACAAAGAATGATCGTTACCAAAGGAAATGTAAACTTTCCAGAAT
TGGATTTAACAACATATAAAATTTCCTCCACCTTACAGTCACTAATGGATGCTAAAAAAAATGGAGATTTATCATCATTT
GTTTTCCCAACTCCCGTGTCCGACAAACAGATGAAAGTATTAGAGGAGTTAGTTGAGGAAACTCGTAAAGAACGTATCTT
TAATTTAATGAATGTAGAAAAATCATGGCAAACCATTCAAAGAGAATATAAAGAATTAGGAATTGTTCCTGATGCAAAAC
AAAAAGTTTTGGAATCGATTTTAAAAACAGCAGAATACAAAGTGGTCGGTCGTGAGGGAATCACACAAATTAATGGTATT
GATTCCAAACAAGAAAATGGAGTAAAACTCCAAAAAAATAAAACAACTGGAAATTTAGAAATTGTCTCCAGTAACACAGC
TTTAAATACATTTGAAATTGCCCAATCGGAAATCCTTCCCAATACAGAAGATTCGGTGAAACTTCGTTTAACAAGTCCAA
CTGGCGAAGAGTTAAATCTTGAATCCATGGGAATTCCAAAAGCATTTAAAGGCGCGGAAACATTAAAGGAATATGTAAAA
AACATTCCCAAGACAATTGATGAAATTCAATCTAATGCAAACAATGTCCAACAGGCAGCAATGAATGCTGCACTTCGATT
TGGAGTTGGAAAGTTTGACCGAGAAGCAGGGAAATATATCTACGAAATCCAAAATGTGAATGTGGTATTGGCATTATTTA
AAAACAATTCTGTGTTCAACGCGAGTGATAGTGAATATTCACAAGAGGTTTCGAGTCGATTTGGAGAAACGATTATTACG
AAGTTTTATCAGAAATATGATAAGGCAACAAAAGTACAAACCTTGTTTTTAAATTATGAAAATGAAGGATGTGCGAGAGA
ATGTAGTACCTATCCTGTTCCAGATAACTTATGTTTTACTACTGGGGATAGCCTGATTGTCAAGTTTACACCAAGTGATT
TAGAAGCTTTATCTGAAGTTGATGTTAAGTTTAGTGCAGCAAAGTCGGAATATTGTAACTATCCATTCGGAAATCCAGAA
TAG

Upstream 100 bases:

>100_bases
TGGTAGCAATACAACTTCAGCATTAGGATTTAATACTTTCGGATGTACTAGCTCCCTCATGTTATATTGTGTAGAACAGT
AATTAGATTCCCTTTTTTAG

Downstream 100 bases:

>100_bases
TTTTTGTTTCGCTTTAAAGCGTTTGTATTTTTACTGATCTGCAATTCATTTAGTTGCAGTGAATCTAAAATACTAAATCC
AATGTCCAATGGAAAATTTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 560; Mature: 560

Protein sequence:

>560_residues
MNSIPSGNNYGDMKRKSLILLTLILLIVVHCRKKTEEILLPEKLYIIPFANNTVSIYHSLDTLERVSAFEKDKYWVVSGI
LKLVPKNQGDKVISFLFGDCDSRFKCTDGKFYIKLNTIQYNADAGLDLQTNLVAPFSPVYIAKKDQVDSIIEGIQFYNQP
SSEYPSKGLSDSFVDHMVQVNKSLAYHDKNEFLIPFYVLQRMIVTKGNVNFPELDLTTYKISSTLQSLMDAKKNGDLSSF
VFPTPVSDKQMKVLEELVEETRKERIFNLMNVEKSWQTIQREYKELGIVPDAKQKVLESILKTAEYKVVGREGITQINGI
DSKQENGVKLQKNKTTGNLEIVSSNTALNTFEIAQSEILPNTEDSVKLRLTSPTGEELNLESMGIPKAFKGAETLKEYVK
NIPKTIDEIQSNANNVQQAAMNAALRFGVGKFDREAGKYIYEIQNVNVVLALFKNNSVFNASDSEYSQEVSSRFGETIIT
KFYQKYDKATKVQTLFLNYENEGCARECSTYPVPDNLCFTTGDSLIVKFTPSDLEALSEVDVKFSAAKSEYCNYPFGNPE

Sequences:

>Translated_560_residues
MNSIPSGNNYGDMKRKSLILLTLILLIVVHCRKKTEEILLPEKLYIIPFANNTVSIYHSLDTLERVSAFEKDKYWVVSGI
LKLVPKNQGDKVISFLFGDCDSRFKCTDGKFYIKLNTIQYNADAGLDLQTNLVAPFSPVYIAKKDQVDSIIEGIQFYNQP
SSEYPSKGLSDSFVDHMVQVNKSLAYHDKNEFLIPFYVLQRMIVTKGNVNFPELDLTTYKISSTLQSLMDAKKNGDLSSF
VFPTPVSDKQMKVLEELVEETRKERIFNLMNVEKSWQTIQREYKELGIVPDAKQKVLESILKTAEYKVVGREGITQINGI
DSKQENGVKLQKNKTTGNLEIVSSNTALNTFEIAQSEILPNTEDSVKLRLTSPTGEELNLESMGIPKAFKGAETLKEYVK
NIPKTIDEIQSNANNVQQAAMNAALRFGVGKFDREAGKYIYEIQNVNVVLALFKNNSVFNASDSEYSQEVSSRFGETIIT
KFYQKYDKATKVQTLFLNYENEGCARECSTYPVPDNLCFTTGDSLIVKFTPSDLEALSEVDVKFSAAKSEYCNYPFGNPE
>Mature_560_residues
MNSIPSGNNYGDMKRKSLILLTLILLIVVHCRKKTEEILLPEKLYIIPFANNTVSIYHSLDTLERVSAFEKDKYWVVSGI
LKLVPKNQGDKVISFLFGDCDSRFKCTDGKFYIKLNTIQYNADAGLDLQTNLVAPFSPVYIAKKDQVDSIIEGIQFYNQP
SSEYPSKGLSDSFVDHMVQVNKSLAYHDKNEFLIPFYVLQRMIVTKGNVNFPELDLTTYKISSTLQSLMDAKKNGDLSSF
VFPTPVSDKQMKVLEELVEETRKERIFNLMNVEKSWQTIQREYKELGIVPDAKQKVLESILKTAEYKVVGREGITQINGI
DSKQENGVKLQKNKTTGNLEIVSSNTALNTFEIAQSEILPNTEDSVKLRLTSPTGEELNLESMGIPKAFKGAETLKEYVK
NIPKTIDEIQSNANNVQQAAMNAALRFGVGKFDREAGKYIYEIQNVNVVLALFKNNSVFNASDSEYSQEVSSRFGETIIT
KFYQKYDKATKVQTLFLNYENEGCARECSTYPVPDNLCFTTGDSLIVKFTPSDLEALSEVDVKFSAAKSEYCNYPFGNPE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 63218; Mature: 63218

Theoretical pI: Translated: 5.35; Mature: 5.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSIPSGNNYGDMKRKSLILLTLILLIVVHCRKKTEEILLPEKLYIIPFANNTVSIYHSL
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCEEEEEEECCCEEEEEEHH
DTLERVSAFEKDKYWVVSGILKLVPKNQGDKVISFLFGDCDSRFKCTDGKFYIKLNTIQY
HHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCEEECCCEEEEEEEEEEE
NADAGLDLQTNLVAPFSPVYIAKKDQVDSIIEGIQFYNQPSSEYPSKGLSDSFVDHMVQV
CCCCCCCEECCCCCCCCCEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHH
NKSLAYHDKNEFLIPFYVLQRMIVTKGNVNFPELDLTTYKISSTLQSLMDAKKNGDLSSF
HHHHEEECCCCEEEHHHHHHHHHHHCCCCCCCCCCEEHHHHHHHHHHHHHHHCCCCCCCE
VFPTPVSDKQMKVLEELVEETRKERIFNLMNVEKSWQTIQREYKELGIVPDAKQKVLESI
ECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
LKTAEYKVVGREGITQINGIDSKQENGVKLQKNKTTGNLEIVSSNTALNTFEIAQSEILP
HHHHHEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEECCCCCCHHHHHHHHCCC
NTEDSVKLRLTSPTGEELNLESMGIPKAFKGAETLKEYVKNIPKTIDEIQSNANNVQQAA
CCCCCEEEEEECCCCCCCCCHHCCCCHHHCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHH
MNAALRFGVGKFDREAGKYIYEIQNVNVVLALFKNNSVFNASDSEYSQEVSSRFGETIIT
HHHHHHHCCCHHHHHHCCEEEEEECCEEEEEEEECCCEECCCCHHHHHHHHHHHHHHHHH
KFYQKYDKATKVQTLFLNYENEGCARECSTYPVPDNLCFTTGDSLIVKFTPSDLEALSEV
HHHHHHHHHHEEEEEEEEECCCCCHHHCCCCCCCCCCEEECCCCEEEEECCHHHHHHHHC
DVKFSAAKSEYCNYPFGNPE
CCCEEHHHHHHCCCCCCCCC
>Mature Secondary Structure
MNSIPSGNNYGDMKRKSLILLTLILLIVVHCRKKTEEILLPEKLYIIPFANNTVSIYHSL
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCEEEEEEECCCEEEEEEHH
DTLERVSAFEKDKYWVVSGILKLVPKNQGDKVISFLFGDCDSRFKCTDGKFYIKLNTIQY
HHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCEEECCCEEEEEEEEEEE
NADAGLDLQTNLVAPFSPVYIAKKDQVDSIIEGIQFYNQPSSEYPSKGLSDSFVDHMVQV
CCCCCCCEECCCCCCCCCEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHH
NKSLAYHDKNEFLIPFYVLQRMIVTKGNVNFPELDLTTYKISSTLQSLMDAKKNGDLSSF
HHHHEEECCCCEEEHHHHHHHHHHHCCCCCCCCCCEEHHHHHHHHHHHHHHHCCCCCCCE
VFPTPVSDKQMKVLEELVEETRKERIFNLMNVEKSWQTIQREYKELGIVPDAKQKVLESI
ECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
LKTAEYKVVGREGITQINGIDSKQENGVKLQKNKTTGNLEIVSSNTALNTFEIAQSEILP
HHHHHEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEECCCCCCHHHHHHHHCCC
NTEDSVKLRLTSPTGEELNLESMGIPKAFKGAETLKEYVKNIPKTIDEIQSNANNVQQAA
CCCCCEEEEEECCCCCCCCCHHCCCCHHHCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHH
MNAALRFGVGKFDREAGKYIYEIQNVNVVLALFKNNSVFNASDSEYSQEVSSRFGETIIT
HHHHHHHCCCHHHHHHCCEEEEEECCEEEEEEEECCCEECCCCHHHHHHHHHHHHHHHHH
KFYQKYDKATKVQTLFLNYENEGCARECSTYPVPDNLCFTTGDSLIVKFTPSDLEALSEV
HHHHHHHHHHEEEEEEEEECCCCCHHHCCCCCCCCCCEEECCCCEEEEECCHHHHHHHHC
DVKFSAAKSEYCNYPFGNPE
CCCEEHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA