| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is yjjG [C]
Identifier: 183220001
GI number: 183220001
Start: 585948
End: 586805
Strand: Direct
Name: yjjG [C]
Synonym: LEPBI_I0583
Alternate gene names: 183220001
Gene position: 585948-586805 (Clockwise)
Preceding gene: 183219999
Following gene: 183220003
Centisome position: 16.28
GC content: 37.3
Gene sequence:
>858_bases ATGGCATTATTTTTAGACTTAGACAACACCATTTTACCTTCCAAAGGCGCTTATGATTATGCCCTCAAACAATGTGCCAT AGACTGGAAGGAACGTAAGTTAGGTGATGATTTTCTTGAGTTATACGAATCAGCTAGAAAACAAGTTAAATCCCAATTGA AACACCATAGTTCCAATCGTTTGCGGTTGTTATGTTTTAAGTTGATGTTTGAGATGTTACGATCAAATTTCAAAAAAAAC TCTTCTTTAAACGTAGCAAGTTTAGAAGATCCAAAACTTGAAGCAAACATGGAAAATGGCTTCCAAACCCAAGACATCAC AGAGATCTTTTGGATGGAGGAACGATATTTTTTTCACTTTCTCAGTTTCTATAAAGAGGAAAAAAATAAGGATGAATACC AAACCTCATTATTTCCGAAGTTAGTCTCTCTCTCCCAAGAATTTCCGATTTATCTAACAACAAATGAAACCCTTCGCACA CAATTATTGAAGGTGCAAGGTTTTTTGCCTGCTGATTTTCGGTTCACCCTCATCACATCTGAAGAAGTAGGTTTTGAAAA ACCTTCAAAAGAATTTTTCCAGTATGTGATGGAGAAAACAAAGGAAGATCCATCCGATTGTATTTTACTAGGTGATAATT GGGAAGATGATATCATCGGTGCAAGCTCTCATGGGATTTCATGCATTCATGTTCCCGAGATGTGGGGAAAGGGAGATGAA GTGAAAGAATGTAGCAATCCTCTGAATTCACCCACTGACAAAACCGCAAGTCCACATCCAGTGAGTATCTGGAAAGCTCC CAATATCCTTTCAGGTCTAAACTTTGCTAGGTTATGGCTTTTTCAGCGTCAAAAATAA
Upstream 100 bases:
>100_bases AATCATGATCTTAAATCGTATATACCTTTGTCTTTAAGACAAGCCATAAATCCTTACCAAACCGTTGACAGATGGAATTG ATTCGGTTTCCCTTTCCGTT
Downstream 100 bases:
>100_bases AGTATTGTTCCAATTGATGGTTTTGAAACTGAGAGTAAACACAAGTTTGGTGAAGAAATAATAAGCTAACTTCACGTAAA CGGCAAATTTACTTTTGCTT
Product: putative dehalogenase-like hydrolase
Products: NA
Alternate protein names: Dehalogenase-Like Hydrolase
Number of amino acids: Translated: 285; Mature: 284
Protein sequence:
>285_residues MALFLDLDNTILPSKGAYDYALKQCAIDWKERKLGDDFLELYESARKQVKSQLKHHSSNRLRLLCFKLMFEMLRSNFKKN SSLNVASLEDPKLEANMENGFQTQDITEIFWMEERYFFHFLSFYKEEKNKDEYQTSLFPKLVSLSQEFPIYLTTNETLRT QLLKVQGFLPADFRFTLITSEEVGFEKPSKEFFQYVMEKTKEDPSDCILLGDNWEDDIIGASSHGISCIHVPEMWGKGDE VKECSNPLNSPTDKTASPHPVSIWKAPNILSGLNFARLWLFQRQK
Sequences:
>Translated_285_residues MALFLDLDNTILPSKGAYDYALKQCAIDWKERKLGDDFLELYESARKQVKSQLKHHSSNRLRLLCFKLMFEMLRSNFKKN SSLNVASLEDPKLEANMENGFQTQDITEIFWMEERYFFHFLSFYKEEKNKDEYQTSLFPKLVSLSQEFPIYLTTNETLRT QLLKVQGFLPADFRFTLITSEEVGFEKPSKEFFQYVMEKTKEDPSDCILLGDNWEDDIIGASSHGISCIHVPEMWGKGDE VKECSNPLNSPTDKTASPHPVSIWKAPNILSGLNFARLWLFQRQK >Mature_284_residues ALFLDLDNTILPSKGAYDYALKQCAIDWKERKLGDDFLELYESARKQVKSQLKHHSSNRLRLLCFKLMFEMLRSNFKKNS SLNVASLEDPKLEANMENGFQTQDITEIFWMEERYFFHFLSFYKEEKNKDEYQTSLFPKLVSLSQEFPIYLTTNETLRTQ LLKVQGFLPADFRFTLITSEEVGFEKPSKEFFQYVMEKTKEDPSDCILLGDNWEDDIIGASSHGISCIHVPEMWGKGDEV KECSNPLNSPTDKTASPHPVSIWKAPNILSGLNFARLWLFQRQK
Specific function: Unknown
COG id: COG1011
COG function: function code R; Predicted hydrolase (HAD superfamily)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33232; Mature: 33101
Theoretical pI: Translated: 5.46; Mature: 5.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALFLDLDNTILPSKGAYDYALKQCAIDWKERKLGDDFLELYESARKQVKSQLKHHSSNR CEEEEECCCCCCCCCCCHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCC LRLLCFKLMFEMLRSNFKKNSSLNVASLEDPKLEANMENGFQTQDITEIFWMEERYFFHF HHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH LSFYKEEKNKDEYQTSLFPKLVSLSQEFPIYLTTNETLRTQLLKVQGFLPADFRFTLITS HHHHHHHCCHHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHCCCCCCEEEEEEEC EEVGFEKPSKEFFQYVMEKTKEDPSDCILLGDNWEDDIIGASSHGISCIHVPEMWGKGDE CCCCCCCCHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCEEEEECHHHCCCCCH VKECSNPLNSPTDKTASPHPVSIWKAPNILSGLNFARLWLFQRQK HHHHCCCCCCCCCCCCCCCCEEEECCCCHHHCCCHHHHHHHHCCC >Mature Secondary Structure ALFLDLDNTILPSKGAYDYALKQCAIDWKERKLGDDFLELYESARKQVKSQLKHHSSNR EEEEECCCCCCCCCCCHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCC LRLLCFKLMFEMLRSNFKKNSSLNVASLEDPKLEANMENGFQTQDITEIFWMEERYFFHF HHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH LSFYKEEKNKDEYQTSLFPKLVSLSQEFPIYLTTNETLRTQLLKVQGFLPADFRFTLITS HHHHHHHCCHHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHCCCCCCEEEEEEEC EEVGFEKPSKEFFQYVMEKTKEDPSDCILLGDNWEDDIIGASSHGISCIHVPEMWGKGDE CCCCCCCCHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCEEEEECHHHCCCCCH VKECSNPLNSPTDKTASPHPVSIWKAPNILSGLNFARLWLFQRQK HHHHCCCCCCCCCCCCCCCCEEEECCCCHHHCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA