| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183219969
Identifier: 183219969
GI number: 183219969
Start: 549448
End: 550551
Strand: Direct
Name: 183219969
Synonym: LEPBI_I0551
Alternate gene names: NA
Gene position: 549448-550551 (Clockwise)
Preceding gene: 183219960
Following gene: 183219970
Centisome position: 15.26
GC content: 40.49
Gene sequence:
>1104_bases ATGAAACAATCCCTTCTTATTCTCATGATGAGTCTCGTGATGCAGGCACCTATGTTTGCGGAATCAGTCTCTAGTAAATC CTATCAAAAACGAATCGAGCTTTTGACTTACCTACGTGAGCTTGAACCAATCGTTAAAAACTTCCGTGGGGAAGATCCAG AAGGAAAACCTTCTGAACTGAATGCACCCGAAGGGAAAGAAGGCTTCCGTATGAAAAAATACTTAGAAGCCAAACGAATC TACCAAGAAGGTCTACAATACCATTTTGAAGGAAATTTTTCCTCTGCTTTCCAACGGTTTCTCGAATGCCAACTTGCCAT CGAAAAAATGACCGAAGAACTTTCCCAGTTGTACATCCTCCGTGCTGAAGAGATGATGAAAACAGCGATGGAACGTAAAA ATCCAAATAATCCAATGGACAAGGCTTTACTTGATATCTCCATTGAATATGGAAAAGGATCTTACTTCCGCCAAGATGTG ATGGACCTTCCAAGAGAAGCGCCATACCAAAGACGTATGTATGACCCAAAAGAGGCTCATTACAGCTATAACAAATACGA TATTGAAAAGAATATGGAACTTGGTTACAAACACTTAGGTCTTGCAAAAGAAGCAAGAGCCAATGCATTGAAAGTGGAAC GTAATTTGGAAAAACACCAAAAACTCCAACCATCTCACAGAAAGTATCGTATCGAGTTGTACTTTGGAGCGATCAACCTT GCTCGTGATTCAAAGGCCAATGCAGTGAATATTTATAAATTAAAATATCCTTATGATAACTACTATCTAAACAATTCACA AGCCAAAACGGAAGCATCGAAAGATGAAACTGGTGCCAGTGTAGAAGGCCAGCCGGTGAAAATTGATGGTGTGACATACG ACTTTACTAAAAACCCATACATCAAATATGACAATCGCCTCCAAGCAATGTTTGATGTGCGAGTGCCAGAAGAATACCGT GTGGACCATGCTGATGTGAGAGGTAGAGTGTATGAATTGGATTCCAATAATATGGTGTTCATGAAATACGACCAAGAACG TAAAAAAGCTCTGAACGTTCCGCCAAAACCAGCGCAAGGAAGCACAACCACTCCGCAACAATAA
Upstream 100 bases:
>100_bases TATCATAAATCTCCGATAATACTCACAGGGGACACCCTGAAATTACTTGTAAGATTCTTCTAACGAAGGAAAGTACGGAA ACGGAATGAATGGCAGAGCA
Downstream 100 bases:
>100_bases GAAACACTATCTAACACTGTTTCCGATTTAATAGCCCAAGAAATTTCTTGGGCTTTTTTATATCCACAAAAACCACTCTT TGGTCTAATTGTTGCTATGG
Product: putative signal peptide
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 367; Mature: 367
Protein sequence:
>367_residues MKQSLLILMMSLVMQAPMFAESVSSKSYQKRIELLTYLRELEPIVKNFRGEDPEGKPSELNAPEGKEGFRMKKYLEAKRI YQEGLQYHFEGNFSSAFQRFLECQLAIEKMTEELSQLYILRAEEMMKTAMERKNPNNPMDKALLDISIEYGKGSYFRQDV MDLPREAPYQRRMYDPKEAHYSYNKYDIEKNMELGYKHLGLAKEARANALKVERNLEKHQKLQPSHRKYRIELYFGAINL ARDSKANAVNIYKLKYPYDNYYLNNSQAKTEASKDETGASVEGQPVKIDGVTYDFTKNPYIKYDNRLQAMFDVRVPEEYR VDHADVRGRVYELDSNNMVFMKYDQERKKALNVPPKPAQGSTTTPQQ
Sequences:
>Translated_367_residues MKQSLLILMMSLVMQAPMFAESVSSKSYQKRIELLTYLRELEPIVKNFRGEDPEGKPSELNAPEGKEGFRMKKYLEAKRI YQEGLQYHFEGNFSSAFQRFLECQLAIEKMTEELSQLYILRAEEMMKTAMERKNPNNPMDKALLDISIEYGKGSYFRQDV MDLPREAPYQRRMYDPKEAHYSYNKYDIEKNMELGYKHLGLAKEARANALKVERNLEKHQKLQPSHRKYRIELYFGAINL ARDSKANAVNIYKLKYPYDNYYLNNSQAKTEASKDETGASVEGQPVKIDGVTYDFTKNPYIKYDNRLQAMFDVRVPEEYR VDHADVRGRVYELDSNNMVFMKYDQERKKALNVPPKPAQGSTTTPQQ >Mature_367_residues MKQSLLILMMSLVMQAPMFAESVSSKSYQKRIELLTYLRELEPIVKNFRGEDPEGKPSELNAPEGKEGFRMKKYLEAKRI YQEGLQYHFEGNFSSAFQRFLECQLAIEKMTEELSQLYILRAEEMMKTAMERKNPNNPMDKALLDISIEYGKGSYFRQDV MDLPREAPYQRRMYDPKEAHYSYNKYDIEKNMELGYKHLGLAKEARANALKVERNLEKHQKLQPSHRKYRIELYFGAINL ARDSKANAVNIYKLKYPYDNYYLNNSQAKTEASKDETGASVEGQPVKIDGVTYDFTKNPYIKYDNRLQAMFDVRVPEEYR VDHADVRGRVYELDSNNMVFMKYDQERKKALNVPPKPAQGSTTTPQQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42997; Mature: 42997
Theoretical pI: Translated: 9.14; Mature: 9.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQSLLILMMSLVMQAPMFAESVSSKSYQKRIELLTYLRELEPIVKNFRGEDPEGKPSEL CCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC NAPEGKEGFRMKKYLEAKRIYQEGLQYHFEGNFSSAFQRFLECQLAIEKMTEELSQLYIL CCCCCCCHHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH RAEEMMKTAMERKNPNNPMDKALLDISIEYGKGSYFRQDVMDLPREAPYQRRMYDPKEAH HHHHHHHHHHHHCCCCCHHHHHEEEEEEECCCCCHHHHHHHHCCCCCCHHHHCCCCHHHC YSYNKYDIEKNMELGYKHLGLAKEARANALKVERNLEKHQKLQPSHRKYRIELYFGAINL CCCCCEECCCCHHCCHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEEE ARDSKANAVNIYKLKYPYDNYYLNNSQAKTEASKDETGASVEGQPVKIDGVTYDFTKNPY CCCCCCCEEEEEEEECCCCCEEECCCHHHHCCCCCCCCCCCCCCEEEECCEEEECCCCCC IKYDNRLQAMFDVRVPEEYRVDHADVRGRVYELDSNNMVFMKYDQERKKALNVPPKPAQG EEECCCEEEEEEECCCHHHCCCCHHHCCEEEEECCCCEEEEEECHHHHHHCCCCCCCCCC STTTPQQ CCCCCCC >Mature Secondary Structure MKQSLLILMMSLVMQAPMFAESVSSKSYQKRIELLTYLRELEPIVKNFRGEDPEGKPSEL CCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC NAPEGKEGFRMKKYLEAKRIYQEGLQYHFEGNFSSAFQRFLECQLAIEKMTEELSQLYIL CCCCCCCHHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH RAEEMMKTAMERKNPNNPMDKALLDISIEYGKGSYFRQDVMDLPREAPYQRRMYDPKEAH HHHHHHHHHHHHCCCCCHHHHHEEEEEEECCCCCHHHHHHHHCCCCCCHHHHCCCCHHHC YSYNKYDIEKNMELGYKHLGLAKEARANALKVERNLEKHQKLQPSHRKYRIELYFGAINL CCCCCEECCCCHHCCHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEEE ARDSKANAVNIYKLKYPYDNYYLNNSQAKTEASKDETGASVEGQPVKIDGVTYDFTKNPY CCCCCCCEEEEEEEECCCCCEEECCCHHHHCCCCCCCCCCCCCCEEEECCEEEECCCCCC IKYDNRLQAMFDVRVPEEYRVDHADVRGRVYELDSNNMVFMKYDQERKKALNVPPKPAQG EEECCCEEEEEEECCCHHHCCCCHHHCCEEEEECCCCEEEEEECHHHHHHCCCCCCCCCC STTTPQQ CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA