| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183219960
Identifier: 183219960
GI number: 183219960
Start: 538973
End: 540070
Strand: Direct
Name: 183219960
Synonym: LEPBI_I0542
Alternate gene names: NA
Gene position: 538973-540070 (Clockwise)
Preceding gene: 183219959
Following gene: 183219969
Centisome position: 14.97
GC content: 34.43
Gene sequence:
>1098_bases GTGGATTTAATTAGAAATCGTTATTTGTTCGTCCCATTCCTAGTCGTTTTTTTGACCTTCTGTTTGGATAAATTACTGAT CTTGGAAAACATCCACACATACTTTTCAAAATCTTTATCTGATATCAATTACATCCAAAAGAATGAATTGTATGAAGATT TAAAAGAATACCTGAGTTTAAAAGATCGCGACAAAGTGCTTGTGTATTTTGGTAATTCCAGAGGGCTTTTGTTTGACAAT GAATACATTCATAAAAAATATCCAGGCTGGGTAATGTTCAATTTTTCAGTTCCAGGTGGAAAACCTGATTATGTTTTGCA ATGGATGGAAGAGTTTGAAAAGGATGGTGTAAAACCTGACTTCTTTTTGTTTGATCATTCTGTCGAGATGTTTAACTCGG CAGCAAGTTTAAAAGTTGATGAAACTCTCACGAATGGACTCAATGTTTCCTTTGTCTTAAAACATTTTTCTTTATTTTCC ACAGAGGATATTTCTACACTCATCGCCAAACGAATGTTTCGTGCATATCAATACCGACCAAAATTGGAAGTTATTATAGC AAGGGCCAAAAATAAAGACAGTTTTTTATATCCTTATCGTGATTTACGTAACAATTTAATGGCCAATTTAAAATCGGGAA AAGGATCTGCTATGACTCCCGGAACACACCAAGCAGTGCTTCCACCTGAGTTATTAAAAAAATCAGCGTATGGTGATTTC CATTCCTATTTAGTTCCTTTTCGATTTTCTGAAAATATTTTGAGTTTTACTGATCAATCTTTGGACTTAGCAAAAAAATT AAATGTTCCTTCTGCTGTGATTTGGGTGAGACTTTCTTTACCTTATATGGATCACATTCGTCATTTAAAAGTGTCAGTTG GTGAAAATAAAGAAGGGACAGTTTATGATGATTGGTACCCGCGTATGGTTGGGTATCACAAAGAAAACGGAATTCCTTTT TGGAACATGAACGATGATCCAACATATACCTGCAACGAGTTTAGTGATGCAGGTCATATGTCACCATCGTGTTACGATGA GTATACGGATTATATTTTTAAAAACTTAAATCAATCTTTAGTTATGGGTGTTCGGTAG
Upstream 100 bases:
>100_bases TTGGTTGGTCCCTGTTCTTGGAATCATCACCATCTTCTTACTTGCCACTCTTTCGCAAGATGGTGGTGAGTTTATCTATT ATCGTTTTTAGGAGGAATTT
Downstream 100 bases:
>100_bases AACTCAGTTCGATTTTGCACATCATTGGGGGAAAGTTTTTCTGGATCCGTTGGATTCGGTTTTGTTGGACTTGGTTGTTG TGGTTTGGTTTGGTTTTCTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 365; Mature: 365
Protein sequence:
>365_residues MDLIRNRYLFVPFLVVFLTFCLDKLLILENIHTYFSKSLSDINYIQKNELYEDLKEYLSLKDRDKVLVYFGNSRGLLFDN EYIHKKYPGWVMFNFSVPGGKPDYVLQWMEEFEKDGVKPDFFLFDHSVEMFNSAASLKVDETLTNGLNVSFVLKHFSLFS TEDISTLIAKRMFRAYQYRPKLEVIIARAKNKDSFLYPYRDLRNNLMANLKSGKGSAMTPGTHQAVLPPELLKKSAYGDF HSYLVPFRFSENILSFTDQSLDLAKKLNVPSAVIWVRLSLPYMDHIRHLKVSVGENKEGTVYDDWYPRMVGYHKENGIPF WNMNDDPTYTCNEFSDAGHMSPSCYDEYTDYIFKNLNQSLVMGVR
Sequences:
>Translated_365_residues MDLIRNRYLFVPFLVVFLTFCLDKLLILENIHTYFSKSLSDINYIQKNELYEDLKEYLSLKDRDKVLVYFGNSRGLLFDN EYIHKKYPGWVMFNFSVPGGKPDYVLQWMEEFEKDGVKPDFFLFDHSVEMFNSAASLKVDETLTNGLNVSFVLKHFSLFS TEDISTLIAKRMFRAYQYRPKLEVIIARAKNKDSFLYPYRDLRNNLMANLKSGKGSAMTPGTHQAVLPPELLKKSAYGDF HSYLVPFRFSENILSFTDQSLDLAKKLNVPSAVIWVRLSLPYMDHIRHLKVSVGENKEGTVYDDWYPRMVGYHKENGIPF WNMNDDPTYTCNEFSDAGHMSPSCYDEYTDYIFKNLNQSLVMGVR >Mature_365_residues MDLIRNRYLFVPFLVVFLTFCLDKLLILENIHTYFSKSLSDINYIQKNELYEDLKEYLSLKDRDKVLVYFGNSRGLLFDN EYIHKKYPGWVMFNFSVPGGKPDYVLQWMEEFEKDGVKPDFFLFDHSVEMFNSAASLKVDETLTNGLNVSFVLKHFSLFS TEDISTLIAKRMFRAYQYRPKLEVIIARAKNKDSFLYPYRDLRNNLMANLKSGKGSAMTPGTHQAVLPPELLKKSAYGDF HSYLVPFRFSENILSFTDQSLDLAKKLNVPSAVIWVRLSLPYMDHIRHLKVSVGENKEGTVYDDWYPRMVGYHKENGIPF WNMNDDPTYTCNEFSDAGHMSPSCYDEYTDYIFKNLNQSLVMGVR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42652; Mature: 42652
Theoretical pI: Translated: 6.86; Mature: 6.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDLIRNRYLFVPFLVVFLTFCLDKLLILENIHTYFSKSLSDINYIQKNELYEDLKEYLSL CCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC KDRDKVLVYFGNSRGLLFDNEYIHKKYPGWVMFNFSVPGGKPDYVLQWMEEFEKDGVKPD CCCCEEEEEEECCCCEEECCCHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCC FFLFDHSVEMFNSAASLKVDETLTNGLNVSFVLKHFSLFSTEDISTLIAKRMFRAYQYRP EEEEECHHHHHCCCCCEEEHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCC KLEVIIARAKNKDSFLYPYRDLRNNLMANLKSGKGSAMTPGTHQAVLPPELLKKSAYGDF CEEEEEEECCCCCCEECCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCCCH HSYLVPFRFSENILSFTDQSLDLAKKLNVPSAVIWVRLSLPYMDHIRHLKVSVGENKEGT HHHEECEEECCHHHHHCCHHHHHHHHCCCCCEEEEEEECCCHHHHHHEEEEEECCCCCCC VYDDWYPRMVGYHKENGIPFWNMNDDPTYTCNEFSDAGHMSPSCYDEYTDYIFKNLNQSL EECCCCHHHHCEECCCCCEEECCCCCCCEECCCCCCCCCCCCHHHHHHHHHHHHCCCHHH VMGVR HCCCC >Mature Secondary Structure MDLIRNRYLFVPFLVVFLTFCLDKLLILENIHTYFSKSLSDINYIQKNELYEDLKEYLSL CCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC KDRDKVLVYFGNSRGLLFDNEYIHKKYPGWVMFNFSVPGGKPDYVLQWMEEFEKDGVKPD CCCCEEEEEEECCCCEEECCCHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCC FFLFDHSVEMFNSAASLKVDETLTNGLNVSFVLKHFSLFSTEDISTLIAKRMFRAYQYRP EEEEECHHHHHCCCCCEEEHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCC KLEVIIARAKNKDSFLYPYRDLRNNLMANLKSGKGSAMTPGTHQAVLPPELLKKSAYGDF CEEEEEEECCCCCCEECCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCCCH HSYLVPFRFSENILSFTDQSLDLAKKLNVPSAVIWVRLSLPYMDHIRHLKVSVGENKEGT HHHEECEEECCHHHHHCCHHHHHHHHCCCCCEEEEEEECCCHHHHHHEEEEEECCCCCCC VYDDWYPRMVGYHKENGIPFWNMNDDPTYTCNEFSDAGHMSPSCYDEYTDYIFKNLNQSL EECCCCHHHHCEECCCCCEEECCCCCCCEECCCCCCCCCCCCHHHHHHHHHHHHCCCHHH VMGVR HCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA