Definition Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence.
Accession NC_010602
Length 3,599,677

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The map label for this gene is 183219960

Identifier: 183219960

GI number: 183219960

Start: 538973

End: 540070

Strand: Direct

Name: 183219960

Synonym: LEPBI_I0542

Alternate gene names: NA

Gene position: 538973-540070 (Clockwise)

Preceding gene: 183219959

Following gene: 183219969

Centisome position: 14.97

GC content: 34.43

Gene sequence:

>1098_bases
GTGGATTTAATTAGAAATCGTTATTTGTTCGTCCCATTCCTAGTCGTTTTTTTGACCTTCTGTTTGGATAAATTACTGAT
CTTGGAAAACATCCACACATACTTTTCAAAATCTTTATCTGATATCAATTACATCCAAAAGAATGAATTGTATGAAGATT
TAAAAGAATACCTGAGTTTAAAAGATCGCGACAAAGTGCTTGTGTATTTTGGTAATTCCAGAGGGCTTTTGTTTGACAAT
GAATACATTCATAAAAAATATCCAGGCTGGGTAATGTTCAATTTTTCAGTTCCAGGTGGAAAACCTGATTATGTTTTGCA
ATGGATGGAAGAGTTTGAAAAGGATGGTGTAAAACCTGACTTCTTTTTGTTTGATCATTCTGTCGAGATGTTTAACTCGG
CAGCAAGTTTAAAAGTTGATGAAACTCTCACGAATGGACTCAATGTTTCCTTTGTCTTAAAACATTTTTCTTTATTTTCC
ACAGAGGATATTTCTACACTCATCGCCAAACGAATGTTTCGTGCATATCAATACCGACCAAAATTGGAAGTTATTATAGC
AAGGGCCAAAAATAAAGACAGTTTTTTATATCCTTATCGTGATTTACGTAACAATTTAATGGCCAATTTAAAATCGGGAA
AAGGATCTGCTATGACTCCCGGAACACACCAAGCAGTGCTTCCACCTGAGTTATTAAAAAAATCAGCGTATGGTGATTTC
CATTCCTATTTAGTTCCTTTTCGATTTTCTGAAAATATTTTGAGTTTTACTGATCAATCTTTGGACTTAGCAAAAAAATT
AAATGTTCCTTCTGCTGTGATTTGGGTGAGACTTTCTTTACCTTATATGGATCACATTCGTCATTTAAAAGTGTCAGTTG
GTGAAAATAAAGAAGGGACAGTTTATGATGATTGGTACCCGCGTATGGTTGGGTATCACAAAGAAAACGGAATTCCTTTT
TGGAACATGAACGATGATCCAACATATACCTGCAACGAGTTTAGTGATGCAGGTCATATGTCACCATCGTGTTACGATGA
GTATACGGATTATATTTTTAAAAACTTAAATCAATCTTTAGTTATGGGTGTTCGGTAG

Upstream 100 bases:

>100_bases
TTGGTTGGTCCCTGTTCTTGGAATCATCACCATCTTCTTACTTGCCACTCTTTCGCAAGATGGTGGTGAGTTTATCTATT
ATCGTTTTTAGGAGGAATTT

Downstream 100 bases:

>100_bases
AACTCAGTTCGATTTTGCACATCATTGGGGGAAAGTTTTTCTGGATCCGTTGGATTCGGTTTTGTTGGACTTGGTTGTTG
TGGTTTGGTTTGGTTTTCTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 365; Mature: 365

Protein sequence:

>365_residues
MDLIRNRYLFVPFLVVFLTFCLDKLLILENIHTYFSKSLSDINYIQKNELYEDLKEYLSLKDRDKVLVYFGNSRGLLFDN
EYIHKKYPGWVMFNFSVPGGKPDYVLQWMEEFEKDGVKPDFFLFDHSVEMFNSAASLKVDETLTNGLNVSFVLKHFSLFS
TEDISTLIAKRMFRAYQYRPKLEVIIARAKNKDSFLYPYRDLRNNLMANLKSGKGSAMTPGTHQAVLPPELLKKSAYGDF
HSYLVPFRFSENILSFTDQSLDLAKKLNVPSAVIWVRLSLPYMDHIRHLKVSVGENKEGTVYDDWYPRMVGYHKENGIPF
WNMNDDPTYTCNEFSDAGHMSPSCYDEYTDYIFKNLNQSLVMGVR

Sequences:

>Translated_365_residues
MDLIRNRYLFVPFLVVFLTFCLDKLLILENIHTYFSKSLSDINYIQKNELYEDLKEYLSLKDRDKVLVYFGNSRGLLFDN
EYIHKKYPGWVMFNFSVPGGKPDYVLQWMEEFEKDGVKPDFFLFDHSVEMFNSAASLKVDETLTNGLNVSFVLKHFSLFS
TEDISTLIAKRMFRAYQYRPKLEVIIARAKNKDSFLYPYRDLRNNLMANLKSGKGSAMTPGTHQAVLPPELLKKSAYGDF
HSYLVPFRFSENILSFTDQSLDLAKKLNVPSAVIWVRLSLPYMDHIRHLKVSVGENKEGTVYDDWYPRMVGYHKENGIPF
WNMNDDPTYTCNEFSDAGHMSPSCYDEYTDYIFKNLNQSLVMGVR
>Mature_365_residues
MDLIRNRYLFVPFLVVFLTFCLDKLLILENIHTYFSKSLSDINYIQKNELYEDLKEYLSLKDRDKVLVYFGNSRGLLFDN
EYIHKKYPGWVMFNFSVPGGKPDYVLQWMEEFEKDGVKPDFFLFDHSVEMFNSAASLKVDETLTNGLNVSFVLKHFSLFS
TEDISTLIAKRMFRAYQYRPKLEVIIARAKNKDSFLYPYRDLRNNLMANLKSGKGSAMTPGTHQAVLPPELLKKSAYGDF
HSYLVPFRFSENILSFTDQSLDLAKKLNVPSAVIWVRLSLPYMDHIRHLKVSVGENKEGTVYDDWYPRMVGYHKENGIPF
WNMNDDPTYTCNEFSDAGHMSPSCYDEYTDYIFKNLNQSLVMGVR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42652; Mature: 42652

Theoretical pI: Translated: 6.86; Mature: 6.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLIRNRYLFVPFLVVFLTFCLDKLLILENIHTYFSKSLSDINYIQKNELYEDLKEYLSL
CCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
KDRDKVLVYFGNSRGLLFDNEYIHKKYPGWVMFNFSVPGGKPDYVLQWMEEFEKDGVKPD
CCCCEEEEEEECCCCEEECCCHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCC
FFLFDHSVEMFNSAASLKVDETLTNGLNVSFVLKHFSLFSTEDISTLIAKRMFRAYQYRP
EEEEECHHHHHCCCCCEEEHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCC
KLEVIIARAKNKDSFLYPYRDLRNNLMANLKSGKGSAMTPGTHQAVLPPELLKKSAYGDF
CEEEEEEECCCCCCEECCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCCCH
HSYLVPFRFSENILSFTDQSLDLAKKLNVPSAVIWVRLSLPYMDHIRHLKVSVGENKEGT
HHHEECEEECCHHHHHCCHHHHHHHHCCCCCEEEEEEECCCHHHHHHEEEEEECCCCCCC
VYDDWYPRMVGYHKENGIPFWNMNDDPTYTCNEFSDAGHMSPSCYDEYTDYIFKNLNQSL
EECCCCHHHHCEECCCCCEEECCCCCCCEECCCCCCCCCCCCHHHHHHHHHHHHCCCHHH
VMGVR
HCCCC
>Mature Secondary Structure
MDLIRNRYLFVPFLVVFLTFCLDKLLILENIHTYFSKSLSDINYIQKNELYEDLKEYLSL
CCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
KDRDKVLVYFGNSRGLLFDNEYIHKKYPGWVMFNFSVPGGKPDYVLQWMEEFEKDGVKPD
CCCCEEEEEEECCCCEEECCCHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCC
FFLFDHSVEMFNSAASLKVDETLTNGLNVSFVLKHFSLFSTEDISTLIAKRMFRAYQYRP
EEEEECHHHHHCCCCCEEEHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCC
KLEVIIARAKNKDSFLYPYRDLRNNLMANLKSGKGSAMTPGTHQAVLPPELLKKSAYGDF
CEEEEEEECCCCCCEECCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCCCH
HSYLVPFRFSENILSFTDQSLDLAKKLNVPSAVIWVRLSLPYMDHIRHLKVSVGENKEGT
HHHEECEEECCHHHHHCCHHHHHHHHCCCCCEEEEEEECCCHHHHHHEEEEEECCCCCCC
VYDDWYPRMVGYHKENGIPFWNMNDDPTYTCNEFSDAGHMSPSCYDEYTDYIFKNLNQSL
EECCCCHHHHCEECCCCCEEECCCCCCCEECCCCCCCCCCCCHHHHHHHHHHHHCCCHHH
VMGVR
HCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA