| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183219958
Identifier: 183219958
GI number: 183219958
Start: 536983
End: 537483
Strand: Direct
Name: 183219958
Synonym: LEPBI_I0540
Alternate gene names: NA
Gene position: 536983-537483 (Clockwise)
Preceding gene: 183219955
Following gene: 183219959
Centisome position: 14.92
GC content: 40.72
Gene sequence:
>501_bases GTGCCCGTAAATGAAAGAATCCTGATCGACGGGATGAATTTGATGTATAAATTTCCAGATCTGGCATTTTGTTTGGGGGA ATTTCGCCTCCAAGATGCGAGAATGGGGTTACTTGCACATTTGAAGCGCCACTTCGGCGAGCTCAAACAACGCAAAATTC TGGTATTTTTTGATGGGAAGAAGGATTTGTTTTCTGACTGTTATTCGGAGGAATGGGAAGGTTTTTCCATTCATTATAGC CATGAAAAAAAAGCGGACGAACTGATCATCGGTTACTTAAATTATTGTGAAATACCTTCGCAGTGTTTGGTGGTAACTTC CGATAAAGAGATTTTGGGATTTGCAAGAAGGCTTCGAGCGAAACGTAAATCCTCAGAAGAATTTTATGCAGAATGGGTCA AACGGGAAACAGAAGTGGATGAAACAGAATTTAACCACCTGAAAGAAGGATTGACACCAAGTAAAGAAAGCGATTACTGG GAGAGACAATTCCTTCCTTGA
Upstream 100 bases:
>100_bases CTTTTCCGATCCCACTCGAGGCACCGACGACGATTATTTTTTTCCCCATGTTTACGTTTTTTTGGTTTAATCGAATCTGG CAAGTGGTTTCATTAGAGTT
Downstream 100 bases:
>100_bases TATGTTGTTCAACTCAATACCCTTTTTAATCTTTTTTTCGCTTGTTTACCTTTTTTATTGGGCACTCCCAAAAGAATTTC GTAAATACTTTCTACTTGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 166; Mature: 165
Protein sequence:
>166_residues MPVNERILIDGMNLMYKFPDLAFCLGEFRLQDARMGLLAHLKRHFGELKQRKILVFFDGKKDLFSDCYSEEWEGFSIHYS HEKKADELIIGYLNYCEIPSQCLVVTSDKEILGFARRLRAKRKSSEEFYAEWVKRETEVDETEFNHLKEGLTPSKESDYW ERQFLP
Sequences:
>Translated_166_residues MPVNERILIDGMNLMYKFPDLAFCLGEFRLQDARMGLLAHLKRHFGELKQRKILVFFDGKKDLFSDCYSEEWEGFSIHYS HEKKADELIIGYLNYCEIPSQCLVVTSDKEILGFARRLRAKRKSSEEFYAEWVKRETEVDETEFNHLKEGLTPSKESDYW ERQFLP >Mature_165_residues PVNERILIDGMNLMYKFPDLAFCLGEFRLQDARMGLLAHLKRHFGELKQRKILVFFDGKKDLFSDCYSEEWEGFSIHYSH EKKADELIIGYLNYCEIPSQCLVVTSDKEILGFARRLRAKRKSSEEFYAEWVKRETEVDETEFNHLKEGLTPSKESDYWE RQFLP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19745; Mature: 19614
Theoretical pI: Translated: 5.69; Mature: 5.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVNERILIDGMNLMYKFPDLAFCLGEFRLQDARMGLLAHLKRHFGELKQRKILVFFDGK CCCCCEEEEECCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCC KDLFSDCYSEEWEGFSIHYSHEKKADELIIGYLNYCEIPSQCLVVTSDKEILGFARRLRA HHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHH KRKSSEEFYAEWVKRETEVDETEFNHLKEGLTPSKESDYWERQFLP HCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCHHHHCCCC >Mature Secondary Structure PVNERILIDGMNLMYKFPDLAFCLGEFRLQDARMGLLAHLKRHFGELKQRKILVFFDGK CCCCEEEEECCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCC KDLFSDCYSEEWEGFSIHYSHEKKADELIIGYLNYCEIPSQCLVVTSDKEILGFARRLRA HHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHH KRKSSEEFYAEWVKRETEVDETEFNHLKEGLTPSKESDYWERQFLP HCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA