| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is yjgQ [C]
Identifier: 183219955
GI number: 183219955
Start: 533482
End: 534618
Strand: Direct
Name: yjgQ [C]
Synonym: LEPBI_I0537
Alternate gene names: 183219955
Gene position: 533482-534618 (Clockwise)
Preceding gene: 183219954
Following gene: 183219958
Centisome position: 14.82
GC content: 36.85
Gene sequence:
>1137_bases ATGAACCTTATTTTAGCTCCTTTTCTCTGGTTCAAAAAAGAGTTTATCCCATTTAGAACTCTGGATCGATATTTATTTTT TGATTTTTTTAAAACATTTATTGGCACACTCATCATGTTAACCTCGATGATTGTGATTTATAAATTCACAGATGTGATGA AATACTTAGTTTCCTCAAAGGTAAATCAATCACATGTGTATTTGCACGTATTGTATTCTTTGCCTTCGATGGTCGACCAG GTAGTAGCACCTGCATTGATGTTTTCTGTTTGTTTTGTAATCGGACAGTTTAGCGTTAACAAGGAACTTGTGGCAATGAT GGTGGCTGGTGTTTCCTTTATGCGGATCATCACACCCATTTTGTTTTTTGGAATTGTTATCTGGCTCGTTATGACCTTGT TTGGCCAAATCGTTGTGATCCCTGCGAACAAAAATGCACAAATACAATTTAGCATCATGGCTAAGGGTTCCAATCGACTC ATCGATTTTGTTTACCAATTGCATATCAAAGGTAAAAAGGGATTTTATTACGTTTATTGGATTGATGAAAAAGAAAATAC GATTAAGGGTGGGTTCAATTATTTTGAAATCACTCCTGACGGTTATCCAACTTATACCGTTTCATCCCAAAAAGCAAAAT TCATTCCAAGTCCACATAGTTGGGTCTTATATGATGCAGAGGAAGTTCGATTCAATGAAAATTTGGAACTGGTATCGAGG ACAAAATATGCTGAAAAAACATATGACTTCCCTGAAGATTTAGCTTATTTCTCAAAACCAATTCGAAATCCAGAAGAGAT GAATTTTTTTGAACTAGCAGATGAAATCCAATCGCGTATCACGAAAGGCATTCCGTTTCGTAATGTAATTGTACAACAAC ACATGGCTTTTTCCATGCCTCTTATGTCATTTGTGGTGGTTACTCTGGGAGCATTGGCAGGAGCCATCACCAAACGATCG GCAGGTGTGGCAAGTCTTGGATTGACCATTGCAGTCGTTTTATTGTATTATATTTTAAATTCCACCGCTAAAACCTTAGC CGAAAATGGTGCCTTACCAATATGGATTGGAATGTGGATCACACCTGTGATTTTCACAACAGCCGCATACTACCTATATA GAAAGATGAATATCTAA
Upstream 100 bases:
>100_bases AAAAAGGTGATGATTTTTTAAATGTTATTTATGAAGACTCAATGTCCTTTTCTGCCAAACGGATTTCGGATGATATGAGT ATGCTGTTATTGGAAATACA
Downstream 100 bases:
>100_bases TCTTTCCAATGTTTTGTTTTTAATAGTAGAAATTTGATCTAAGTGGATTGGAACCTCCCCATCTTAAAAAAGATAGGAAG GTTAGATTGTGATTTAAAGT
Product: hypothetical protein
Products: NA
Alternate protein names: Permease; Permease YjgP/YjgQ; YjgP/YjgQ Family Protein; Permease YjgP/YjgQ Family; YjgP/YjgQ Family Permease; YjgP/YjgQ Permease
Number of amino acids: Translated: 378; Mature: 378
Protein sequence:
>378_residues MNLILAPFLWFKKEFIPFRTLDRYLFFDFFKTFIGTLIMLTSMIVIYKFTDVMKYLVSSKVNQSHVYLHVLYSLPSMVDQ VVAPALMFSVCFVIGQFSVNKELVAMMVAGVSFMRIITPILFFGIVIWLVMTLFGQIVVIPANKNAQIQFSIMAKGSNRL IDFVYQLHIKGKKGFYYVYWIDEKENTIKGGFNYFEITPDGYPTYTVSSQKAKFIPSPHSWVLYDAEEVRFNENLELVSR TKYAEKTYDFPEDLAYFSKPIRNPEEMNFFELADEIQSRITKGIPFRNVIVQQHMAFSMPLMSFVVVTLGALAGAITKRS AGVASLGLTIAVVLLYYILNSTAKTLAENGALPIWIGMWITPVIFTTAAYYLYRKMNI
Sequences:
>Translated_378_residues MNLILAPFLWFKKEFIPFRTLDRYLFFDFFKTFIGTLIMLTSMIVIYKFTDVMKYLVSSKVNQSHVYLHVLYSLPSMVDQ VVAPALMFSVCFVIGQFSVNKELVAMMVAGVSFMRIITPILFFGIVIWLVMTLFGQIVVIPANKNAQIQFSIMAKGSNRL IDFVYQLHIKGKKGFYYVYWIDEKENTIKGGFNYFEITPDGYPTYTVSSQKAKFIPSPHSWVLYDAEEVRFNENLELVSR TKYAEKTYDFPEDLAYFSKPIRNPEEMNFFELADEIQSRITKGIPFRNVIVQQHMAFSMPLMSFVVVTLGALAGAITKRS AGVASLGLTIAVVLLYYILNSTAKTLAENGALPIWIGMWITPVIFTTAAYYLYRKMNI >Mature_378_residues MNLILAPFLWFKKEFIPFRTLDRYLFFDFFKTFIGTLIMLTSMIVIYKFTDVMKYLVSSKVNQSHVYLHVLYSLPSMVDQ VVAPALMFSVCFVIGQFSVNKELVAMMVAGVSFMRIITPILFFGIVIWLVMTLFGQIVVIPANKNAQIQFSIMAKGSNRL IDFVYQLHIKGKKGFYYVYWIDEKENTIKGGFNYFEITPDGYPTYTVSSQKAKFIPSPHSWVLYDAEEVRFNENLELVSR TKYAEKTYDFPEDLAYFSKPIRNPEEMNFFELADEIQSRITKGIPFRNVIVQQHMAFSMPLMSFVVVTLGALAGAITKRS AGVASLGLTIAVVLLYYILNSTAKTLAENGALPIWIGMWITPVIFTTAAYYLYRKMNI
Specific function: Unknown
COG id: COG0795
COG function: function code R; Predicted permeases
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43385; Mature: 43385
Theoretical pI: Translated: 9.49; Mature: 9.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLILAPFLWFKKEFIPFRTLDRYLFFDFFKTFIGTLIMLTSMIVIYKFTDVMKYLVSSK CCEEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC VNQSHVYLHVLYSLPSMVDQVVAPALMFSVCFVIGQFSVNKELVAMMVAGVSFMRIITPI CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH LFFGIVIWLVMTLFGQIVVIPANKNAQIQFSIMAKGSNRLIDFVYQLHIKGKKGFYYVYW HHHHHHHHHHHHHHCCEEEEECCCCCEEEEEEEECCCCHHHHHHHHHEEECCCCEEEEEE IDEKENTIKGGFNYFEITPDGYPTYTVSSQKAKFIPSPHSWVLYDAEEVRFNENLELVSR EECCCCCEECCCCEEEECCCCCCEEEECCCCCCCCCCCCCEEEECHHHHCCCCCHHHHHH TKYAEKTYDFPEDLAYFSKPIRNPEEMNFFELADEIQSRITKGIPFRNVIVQQHMAFSMP HHHHHHCCCCHHHHHHHHHCCCCCHHCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH LMSFVVVTLGALAGAITKRSAGVASLGLTIAVVLLYYILNSTAKTLAENGALPIWIGMWI HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHH TPVIFTTAAYYLYRKMNI HHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNLILAPFLWFKKEFIPFRTLDRYLFFDFFKTFIGTLIMLTSMIVIYKFTDVMKYLVSSK CCEEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC VNQSHVYLHVLYSLPSMVDQVVAPALMFSVCFVIGQFSVNKELVAMMVAGVSFMRIITPI CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH LFFGIVIWLVMTLFGQIVVIPANKNAQIQFSIMAKGSNRLIDFVYQLHIKGKKGFYYVYW HHHHHHHHHHHHHHCCEEEEECCCCCEEEEEEEECCCCHHHHHHHHHEEECCCCEEEEEE IDEKENTIKGGFNYFEITPDGYPTYTVSSQKAKFIPSPHSWVLYDAEEVRFNENLELVSR EECCCCCEECCCCEEEECCCCCCEEEECCCCCCCCCCCCCEEEECHHHHCCCCCHHHHHH TKYAEKTYDFPEDLAYFSKPIRNPEEMNFFELADEIQSRITKGIPFRNVIVQQHMAFSMP HHHHHHCCCCHHHHHHHHHCCCCCHHCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH LMSFVVVTLGALAGAITKRSAGVASLGLTIAVVLLYYILNSTAKTLAENGALPIWIGMWI HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHH TPVIFTTAAYYLYRKMNI HHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA