| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183219895
Identifier: 183219895
GI number: 183219895
Start: 472941
End: 473444
Strand: Direct
Name: 183219895
Synonym: LEPBI_I0477
Alternate gene names: NA
Gene position: 472941-473444 (Clockwise)
Preceding gene: 183219893
Following gene: 183219896
Centisome position: 13.14
GC content: 45.63
Gene sequence:
>504_bases ATGGTCGCAAAAAAAGCAGCAAAGAAGCAGGCTCCTCCCAAAAAAAAGGTCGTAGCCAAGGAAAAACCGAGTAAGGACGC CAAGTCCTCTTCCCCGAAGGAAGATAAAAAAAAGACCGTAGTTGGGTCGAAAGTCCCTGCTACCAAGGGGAAGGCTGTAC CAGCTCCAAAAACTGCTACAGCTACCAAGGAGAAACCGACCCCACAAACCAAAGCGCCTGCTGTAAAAATTGATCCGAAC AATCCATTAGGAAAGAAGTTCAATTGTTACTCTTGCGGAACGAAGTTTTATGATTTGAATAAACCAGAAAAAAAATGCCC TAAATGTGGATCAGACCAGTTGGCAAAACCAGCAATCAAATCCCGCATGGCAGCCATCCGTAGTTCGGAATACGAAGTGG AAGAAGAGGAAGAACCAGTCATTGAAGATGATGAACTCTTAGAAGAAACGGAAGAATTGGAAGAGGCCGAAGAAGAGGAG GTCGTTGCCGAGGAAGAGGAGTGA
Upstream 100 bases:
>100_bases AAAAAAAAACTTTTCATTAATTTTCATCCAGGAGAAAACCGTCCAATTTCAAAAAGGTTGTCCCGTAACGGGGATTTCCA AAACTGTCAAAAGTACGTTT
Downstream 100 bases:
>100_bases TCCTTCCCATCCTTGGTGGACCCACCGGTTCTGGAAAAACTTCCCTCACACAAGTCCTAGACCCAAAACGTTTCGAAATT GTTTCTTTTGACTCACGCCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 167; Mature: 167
Protein sequence:
>167_residues MVAKKAAKKQAPPKKKVVAKEKPSKDAKSSSPKEDKKKTVVGSKVPATKGKAVPAPKTATATKEKPTPQTKAPAVKIDPN NPLGKKFNCYSCGTKFYDLNKPEKKCPKCGSDQLAKPAIKSRMAAIRSSEYEVEEEEEPVIEDDELLEETEELEEAEEEE VVAEEEE
Sequences:
>Translated_167_residues MVAKKAAKKQAPPKKKVVAKEKPSKDAKSSSPKEDKKKTVVGSKVPATKGKAVPAPKTATATKEKPTPQTKAPAVKIDPN NPLGKKFNCYSCGTKFYDLNKPEKKCPKCGSDQLAKPAIKSRMAAIRSSEYEVEEEEEPVIEDDELLEETEELEEAEEEE VVAEEEE >Mature_167_residues MVAKKAAKKQAPPKKKVVAKEKPSKDAKSSSPKEDKKKTVVGSKVPATKGKAVPAPKTATATKEKPTPQTKAPAVKIDPN NPLGKKFNCYSCGTKFYDLNKPEKKCPKCGSDQLAKPAIKSRMAAIRSSEYEVEEEEEPVIEDDELLEETEELEEAEEEE VVAEEEE
Specific function: Unknown
COG id: COG4530
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18315; Mature: 18315
Theoretical pI: Translated: 6.71; Mature: 6.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVAKKAAKKQAPPKKKVVAKEKPSKDAKSSSPKEDKKKTVVGSKVPATKGKAVPAPKTAT CCCCHHHHHCCCCHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCC ATKEKPTPQTKAPAVKIDPNNPLGKKFNCYSCGTKFYDLNKPEKKCPKCGSDQLAKPAIK CCCCCCCCCCCCCEEEECCCCCCCCCCCEEECCCEEEECCCCHHHCCCCCCCHHHHHHHH SRMAAIRSSEYEVEEEEEPVIEDDELLEETEELEEAEEEEVVAEEEE HHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MVAKKAAKKQAPPKKKVVAKEKPSKDAKSSSPKEDKKKTVVGSKVPATKGKAVPAPKTAT CCCCHHHHHCCCCHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCC ATKEKPTPQTKAPAVKIDPNNPLGKKFNCYSCGTKFYDLNKPEKKCPKCGSDQLAKPAIK CCCCCCCCCCCCCEEEECCCCCCCCCCCEEECCCEEEECCCCHHHCCCCCCCHHHHHHHH SRMAAIRSSEYEVEEEEEPVIEDDELLEETEELEEAEEEEVVAEEEE HHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA