| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183219863
Identifier: 183219863
GI number: 183219863
Start: 434461
End: 435645
Strand: Direct
Name: 183219863
Synonym: LEPBI_I0444
Alternate gene names: NA
Gene position: 434461-435645 (Clockwise)
Preceding gene: 183219862
Following gene: 183219866
Centisome position: 12.07
GC content: 31.22
Gene sequence:
>1185_bases ATGAAAAAGTTATCTATAAAATTAAATTTGTATTGTATTTTTCTTTTTATTCAGCTTTGCCTAATTAATTGTAATAATTA CAAAACCTCAAATGATGGAATCATACTTTTATTATTGTATAATCAAATTCTCGAGAGTAGTGATGGAATAAATCGAATGA AATCTGTTGCTATAGATAATGAACGAATTCTTATCTGTGGTGGCACAGGAACACGAATAAGGGGCGATAGTAATTGTCTA CTTTATGAAAATGGGAATTTTCGAAAAATTGGTGAGATGCTGACTGCTAGAAGTTCGAATCATAATATGATTAAACTTAA TGATGGCAATGTTTTCATCTCTGGTGGAATTCACGGGAATTCTACAACTTCGAATACTGAAATTTTTAAAGCAAATTCCT TTTCTTTTGAACCCGGACCAAAAATGATTTCTACTAGAAGTCGGCATTCATTAACAAAATTGCAAAATGGAAAGATTCTA ATCGTTGGTGGGCGAGATTCTAATTTAAATTGGCTTAAATCTGCCGAAATTTATGATCCTGTAACAAACACAATTGAATT AGTAGGCGATTTAAATTTAGCAAGAGGTCGACATTCGTCAGAGTTATTGAGTGATGGTCGAGTTCTTATAATTGGTGGGA CCGTTGGTAATCAAAATACAAATACGACAGAAATCTTTGATCCAATAGCAAAGACTTTTAGTAATGGTCCTCTTCTAAAT TCACCTCGGAGTTATTTTACCTCAACTTTATTGGCAGGTGATAAGATTGTAATTGCTGGAGGAATTTCTGATGATCTAAA TATACAGGGAAATTATTTAAGCTCTATTGAAAATTATAATATCGGTCTGAATTCATTTGCTTTATCTAGTCAGTTTCCTG ACCCCAAAGGAATTCATTCTCAGGTAAAATTATCTTCAACAAAAGTTCTTTTTTGTGGTGGAGCGAATGAGAATGTCACG CCAACTGTAATTGAAAAACGTTGCTATATTTATGATTCAGTTGCTTCATCAGTGGTAGAATCTGCAAGTATGGTTGAGGA AAGAATATACAATACTATGGATTTAATTTCAATGAATAAGATATTAATTTGTGGTGGAAATAATTTAAACCGATATTCTA ATACTTGCGAAATACTCGATTTAGATATAAATTTATCGAAAATAATAATTTCTGAAATATATTAA
Upstream 100 bases:
>100_bases GTAGAGTACTAAATAATTCCATTTTAGTATGCTTAGTTCGTTACCAAAACTATAAAAAAGATCAAGCTAACTGTAAAAAT ATTTTAAGATTGCAAGGGAT
Downstream 100 bases:
>100_bases ATATTTAAATAAATTCGTTATCGTTTCATTCTAAAACTTAAATTTCATCAATCGGTCTCGTATAGGAAATTTTAAAGATA GTTAAAAAGTTAACGGGTAG
Product: kelch repeat-containing protein
Products: NA
Alternate protein names: Kelch Domain-Containing Protein; Kelch Domain Protein; Kelch Repeat Type 1-Containing Protein; NHL Repeat Containing Protein; Transposase; Kelch Motif-Containing Protein; Ig Domain-Containing Domain-Containing Protein; Ig Domain Domain Protein; Lipoprotein
Number of amino acids: Translated: 394; Mature: 394
Protein sequence:
>394_residues MKKLSIKLNLYCIFLFIQLCLINCNNYKTSNDGIILLLLYNQILESSDGINRMKSVAIDNERILICGGTGTRIRGDSNCL LYENGNFRKIGEMLTARSSNHNMIKLNDGNVFISGGIHGNSTTSNTEIFKANSFSFEPGPKMISTRSRHSLTKLQNGKIL IVGGRDSNLNWLKSAEIYDPVTNTIELVGDLNLARGRHSSELLSDGRVLIIGGTVGNQNTNTTEIFDPIAKTFSNGPLLN SPRSYFTSTLLAGDKIVIAGGISDDLNIQGNYLSSIENYNIGLNSFALSSQFPDPKGIHSQVKLSSTKVLFCGGANENVT PTVIEKRCYIYDSVASSVVESASMVEERIYNTMDLISMNKILICGGNNLNRYSNTCEILDLDINLSKIIISEIY
Sequences:
>Translated_394_residues MKKLSIKLNLYCIFLFIQLCLINCNNYKTSNDGIILLLLYNQILESSDGINRMKSVAIDNERILICGGTGTRIRGDSNCL LYENGNFRKIGEMLTARSSNHNMIKLNDGNVFISGGIHGNSTTSNTEIFKANSFSFEPGPKMISTRSRHSLTKLQNGKIL IVGGRDSNLNWLKSAEIYDPVTNTIELVGDLNLARGRHSSELLSDGRVLIIGGTVGNQNTNTTEIFDPIAKTFSNGPLLN SPRSYFTSTLLAGDKIVIAGGISDDLNIQGNYLSSIENYNIGLNSFALSSQFPDPKGIHSQVKLSSTKVLFCGGANENVT PTVIEKRCYIYDSVASSVVESASMVEERIYNTMDLISMNKILICGGNNLNRYSNTCEILDLDINLSKIIISEIY >Mature_394_residues MKKLSIKLNLYCIFLFIQLCLINCNNYKTSNDGIILLLLYNQILESSDGINRMKSVAIDNERILICGGTGTRIRGDSNCL LYENGNFRKIGEMLTARSSNHNMIKLNDGNVFISGGIHGNSTTSNTEIFKANSFSFEPGPKMISTRSRHSLTKLQNGKIL IVGGRDSNLNWLKSAEIYDPVTNTIELVGDLNLARGRHSSELLSDGRVLIIGGTVGNQNTNTTEIFDPIAKTFSNGPLLN SPRSYFTSTLLAGDKIVIAGGISDDLNIQGNYLSSIENYNIGLNSFALSSQFPDPKGIHSQVKLSSTKVLFCGGANENVT PTVIEKRCYIYDSVASSVVESASMVEERIYNTMDLISMNKILICGGNNLNRYSNTCEILDLDINLSKIIISEIY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI51479184, Length=271, Percent_Identity=26.9372693726937, Blast_Score=76, Evalue=4e-14, Organism=Homo sapiens, GI55925604, Length=228, Percent_Identity=28.0701754385965, Blast_Score=72, Evalue=1e-12, Organism=Homo sapiens, GI34101268, Length=286, Percent_Identity=26.9230769230769, Blast_Score=71, Evalue=2e-12, Organism=Drosophila melanogaster, GI21356823, Length=184, Percent_Identity=30.4347826086957, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI24646172, Length=184, Percent_Identity=30.4347826086957, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI19922570, Length=267, Percent_Identity=25.4681647940075, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI28573706, Length=340, Percent_Identity=23.8235294117647, Blast_Score=66, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43274; Mature: 43274
Theoretical pI: Translated: 7.33; Mature: 7.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLSIKLNLYCIFLFIQLCLINCNNYKTSNDGIILLLLYNQILESSDGINRMKSVAIDN CCEEEEEEEHHHHHHHHHHHHCCCCCCEECCCCEEEEEEHHHHHHCCCCHHHHHHEEECC ERILICGGTGTRIRGDSNCLLYENGNFRKIGEMLTARSSNHNMIKLNDGNVFISGGIHGN CEEEEECCCCCEEECCCCEEEEECCCHHHHHHHHHHCCCCCCEEEEECCCEEEECCCCCC STTSNTEIFKANSFSFEPGPKMISTRSRHSLTKLQNGKILIVGGRDSNLNWLKSAEIYDP CCCCCCEEEEECCCCCCCCCCHHCCCCHHHHHHCCCCEEEEEECCCCCCCEEECCCCCCC VTNTIELVGDLNLARGRHSSELLSDGRVLIIGGTVGNQNTNTTEIFDPIAKTFSNGPLLN HHHHHHEEECCHHHCCCCCHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCC SPRSYFTSTLLAGDKIVIAGGISDDLNIQGNYLSSIENYNIGLNSFALSSQFPDPKGIHS CCHHHHHHHHCCCCEEEEEECCCCCCEECCHHHHCCCCCCCCCCEEEECCCCCCCCCCCC QVKLSSTKVLFCGGANENVTPTVIEKRCYIYDSVASSVVESASMVEERIYNTMDLISMNK EEEECCEEEEEECCCCCCCCHHHECCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHEECCE ILICGGNNLNRYSNTCEILDLDINLSKIIISEIY EEEECCCCCCCCCCCEEEEEECCCHHHHHHHHCC >Mature Secondary Structure MKKLSIKLNLYCIFLFIQLCLINCNNYKTSNDGIILLLLYNQILESSDGINRMKSVAIDN CCEEEEEEEHHHHHHHHHHHHCCCCCCEECCCCEEEEEEHHHHHHCCCCHHHHHHEEECC ERILICGGTGTRIRGDSNCLLYENGNFRKIGEMLTARSSNHNMIKLNDGNVFISGGIHGN CEEEEECCCCCEEECCCCEEEEECCCHHHHHHHHHHCCCCCCEEEEECCCEEEECCCCCC STTSNTEIFKANSFSFEPGPKMISTRSRHSLTKLQNGKILIVGGRDSNLNWLKSAEIYDP CCCCCCEEEEECCCCCCCCCCHHCCCCHHHHHHCCCCEEEEEECCCCCCCEEECCCCCCC VTNTIELVGDLNLARGRHSSELLSDGRVLIIGGTVGNQNTNTTEIFDPIAKTFSNGPLLN HHHHHHEEECCHHHCCCCCHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCC SPRSYFTSTLLAGDKIVIAGGISDDLNIQGNYLSSIENYNIGLNSFALSSQFPDPKGIHS CCHHHHHHHHCCCCEEEEEECCCCCCEECCHHHHCCCCCCCCCCEEEECCCCCCCCCCCC QVKLSSTKVLFCGGANENVTPTVIEKRCYIYDSVASSVVESASMVEERIYNTMDLISMNK EEEECCEEEEEECCCCCCCCHHHECCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHEECCE ILICGGNNLNRYSNTCEILDLDINLSKIIISEIY EEEECCCCCCCCCCCEEEEEECCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA