| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183219777
Identifier: 183219777
GI number: 183219777
Start: 353031
End: 354452
Strand: Reverse
Name: 183219777
Synonym: LEPBI_I0354
Alternate gene names: NA
Gene position: 354452-353031 (Counterclockwise)
Preceding gene: 183219784
Following gene: 183219775
Centisome position: 9.85
GC content: 43.67
Gene sequence:
>1422_bases ATGCCACTTAAGTACACTTCCTGCATGAATCGAGAACCAATGTTCGGCCTAGATACAGGTTTTATTTCCAAACAAACCGC TGGCCTCATTCGAGGGATCCTCCAAAAACGATATTCGATTGGAGAAACCTCCATTCCTTTATTTTCTTCCCCTTCTCCAC TTTATCCTGGACTAGAACTCATTTCCGACAAAGGACAAAACCCTATCCAAAAACGACTCGTGGTCGGAAGTATCCGTATG GGGTATGGCCACCACAGGATGGCGCTTTCCGTTTACTCTCATTCCTTACAAAAAAACATTCCTACCTACCTTCATGATTT ACTGGCCATCGAATCCCCGGAGTCAAAGGCCATTCGTGATATCGATTCTGGTTATAGTTTTTTTTCCCGTATGAGTTCTG AGATCGGTGGGCCAGTGGAATGGATTTGGGGACAACTTATGTCTCAAGGAAATCTCACTTCGCTCGAACTATCTTGCCAA CTAGCCGCTCTATATAAGGGACTTATGAATGGCATTCCCACAGACTCCCCTGTGATCACCACATATCCGTTAAATGGTCA AATTGCCATCGCCTCAGGGTTTCAAAAAACCATCCATCTCATTTGTGATAATTATCCACAGTACTACTTACTTGTCCCTG GTGCTCTAAATTTAGTACAGTCTCCCTCTTCGTATACAAAGTTCATGGAGATGGGTGTTCCGAAAGACAACTTAGCAGTG GCGGGACACTGGGTTTCAGAAGACATCGTGTCTAATGCAGTGACCGATTCTGAAAATCGAGTGCGAAGGATTGATGCAAA AAAAGTCAGAAGGTTCTTAATCCCAATTGGTGGTGCTGGTGCACAAAAAGGATACATCGTAGATCTCATCCGATTGACCA AGTCCTATCTCACCAACAAAAAGGCAGTGTATTGGATTAACACCGGAGATCATGTCAAAGTATTAAAAGCAATCGAAGAG TATTTGATCTTCCAAAAAATTCCTTATCTTTCCATTGATTCCTGGGAAGACCTACTAACCTTCATAACACGACATCCTCT CAGGTCAGACGACAATGAAAACAATCCACCTGTTGTTTTGTTTCATTTTCCAACACATACAGAAGCTTTTTCAGCGACAG ACAGGCTCATACGAATCGCGGATGTCCTTGTGACAAAACCATCGGAGTTGGCTTTTTTCCCAATTCCCAAACTTTTTATC CGAAGAGTGGGAGACCATGAAGCCGCCTCTGTTGTTCGCTCCTTGGAACTTGGGGAAGGGACAGTGGAATGTAGGGAAGT GATGCATGCAAAGGAACTCGTTCAAATTTTTACCGAGTCGGATGATTTGTTACTCAGAATGAACGAGTCCATCATTAAAA ATACGATTGAAGGCGTTTATAACGGAAGTAAGACGGCCGTTGCCATGGCGACCGCAACCTAA
Upstream 100 bases:
>100_bases GATCTCAGTCCGCCCAAAATATAAACTTGTTCCATAGGAACCAGGAATGGGCAAAATTCATCACCTGTCAGCTAAGAATT GAAATTTCACTTGAAAGAGA
Downstream 100 bases:
>100_bases TCATCTACGTAGAGAATTTATTTTGGAGTTCCAGTTTTGTGGATTCCCAAATCCCTGGAATTTTTTTCCTTCTAGAATCG ATGTTTCTACATCACCAGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 473; Mature: 472
Protein sequence:
>473_residues MPLKYTSCMNREPMFGLDTGFISKQTAGLIRGILQKRYSIGETSIPLFSSPSPLYPGLELISDKGQNPIQKRLVVGSIRM GYGHHRMALSVYSHSLQKNIPTYLHDLLAIESPESKAIRDIDSGYSFFSRMSSEIGGPVEWIWGQLMSQGNLTSLELSCQ LAALYKGLMNGIPTDSPVITTYPLNGQIAIASGFQKTIHLICDNYPQYYLLVPGALNLVQSPSSYTKFMEMGVPKDNLAV AGHWVSEDIVSNAVTDSENRVRRIDAKKVRRFLIPIGGAGAQKGYIVDLIRLTKSYLTNKKAVYWINTGDHVKVLKAIEE YLIFQKIPYLSIDSWEDLLTFITRHPLRSDDNENNPPVVLFHFPTHTEAFSATDRLIRIADVLVTKPSELAFFPIPKLFI RRVGDHEAASVVRSLELGEGTVECREVMHAKELVQIFTESDDLLLRMNESIIKNTIEGVYNGSKTAVAMATAT
Sequences:
>Translated_473_residues MPLKYTSCMNREPMFGLDTGFISKQTAGLIRGILQKRYSIGETSIPLFSSPSPLYPGLELISDKGQNPIQKRLVVGSIRM GYGHHRMALSVYSHSLQKNIPTYLHDLLAIESPESKAIRDIDSGYSFFSRMSSEIGGPVEWIWGQLMSQGNLTSLELSCQ LAALYKGLMNGIPTDSPVITTYPLNGQIAIASGFQKTIHLICDNYPQYYLLVPGALNLVQSPSSYTKFMEMGVPKDNLAV AGHWVSEDIVSNAVTDSENRVRRIDAKKVRRFLIPIGGAGAQKGYIVDLIRLTKSYLTNKKAVYWINTGDHVKVLKAIEE YLIFQKIPYLSIDSWEDLLTFITRHPLRSDDNENNPPVVLFHFPTHTEAFSATDRLIRIADVLVTKPSELAFFPIPKLFI RRVGDHEAASVVRSLELGEGTVECREVMHAKELVQIFTESDDLLLRMNESIIKNTIEGVYNGSKTAVAMATAT >Mature_472_residues PLKYTSCMNREPMFGLDTGFISKQTAGLIRGILQKRYSIGETSIPLFSSPSPLYPGLELISDKGQNPIQKRLVVGSIRMG YGHHRMALSVYSHSLQKNIPTYLHDLLAIESPESKAIRDIDSGYSFFSRMSSEIGGPVEWIWGQLMSQGNLTSLELSCQL AALYKGLMNGIPTDSPVITTYPLNGQIAIASGFQKTIHLICDNYPQYYLLVPGALNLVQSPSSYTKFMEMGVPKDNLAVA GHWVSEDIVSNAVTDSENRVRRIDAKKVRRFLIPIGGAGAQKGYIVDLIRLTKSYLTNKKAVYWINTGDHVKVLKAIEEY LIFQKIPYLSIDSWEDLLTFITRHPLRSDDNENNPPVVLFHFPTHTEAFSATDRLIRIADVLVTKPSELAFFPIPKLFIR RVGDHEAASVVRSLELGEGTVECREVMHAKELVQIFTESDDLLLRMNESIIKNTIEGVYNGSKTAVAMATAT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52778; Mature: 52646
Theoretical pI: Translated: 7.69; Mature: 7.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLKYTSCMNREPMFGLDTGFISKQTAGLIRGILQKRYSIGETSIPLFSSPSPLYPGLEL CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHH ISDKGQNPIQKRLVVGSIRMGYGHHRMALSVYSHSLQKNIPTYLHDLLAIESPESKAIRD HHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHH IDSGYSFFSRMSSEIGGPVEWIWGQLMSQGNLTSLELSCQLAALYKGLMNGIPTDSPVIT HHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHCCCCCCCEEE TYPLNGQIAIASGFQKTIHLICDNYPQYYLLVPGALNLVQSPSSYTKFMEMGVPKDNLAV EECCCCEEEEECCHHHHHHHHHCCCCCEEEECCCHHHHHCCCHHHHHHHHHCCCCCCCEE AGHWVSEDIVSNAVTDSENRVRRIDAKKVRRFLIPIGGAGAQKGYIVDLIRLTKSYLTNK EECHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHEECCCCCCCCCHHHHHHHHHHHHHCCC KAVYWINTGDHVKVLKAIEEYLIFQKIPYLSIDSWEDLLTFITRHPLRSDDNENNPPVVL CEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCEEE FHFPTHTEAFSATDRLIRIADVLVTKPSELAFFPIPKLFIRRVGDHEAASVVRSLELGEG EECCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHCCCHHHHHHHHHHHCCCC TVECREVMHAKELVQIFTESDDLLLRMNESIIKNTIEGVYNGSKTAVAMATAT HHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHCCCCCEEEEEEECC >Mature Secondary Structure PLKYTSCMNREPMFGLDTGFISKQTAGLIRGILQKRYSIGETSIPLFSSPSPLYPGLEL CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHH ISDKGQNPIQKRLVVGSIRMGYGHHRMALSVYSHSLQKNIPTYLHDLLAIESPESKAIRD HHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHH IDSGYSFFSRMSSEIGGPVEWIWGQLMSQGNLTSLELSCQLAALYKGLMNGIPTDSPVIT HHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHCCCCCCCEEE TYPLNGQIAIASGFQKTIHLICDNYPQYYLLVPGALNLVQSPSSYTKFMEMGVPKDNLAV EECCCCEEEEECCHHHHHHHHHCCCCCEEEECCCHHHHHCCCHHHHHHHHHCCCCCCCEE AGHWVSEDIVSNAVTDSENRVRRIDAKKVRRFLIPIGGAGAQKGYIVDLIRLTKSYLTNK EECHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHEECCCCCCCCCHHHHHHHHHHHHHCCC KAVYWINTGDHVKVLKAIEEYLIFQKIPYLSIDSWEDLLTFITRHPLRSDDNENNPPVVL CEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCEEE FHFPTHTEAFSATDRLIRIADVLVTKPSELAFFPIPKLFIRRVGDHEAASVVRSLELGEG EECCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHCCCHHHHHHHHHHHCCCC TVECREVMHAKELVQIFTESDDLLLRMNESIIKNTIEGVYNGSKTAVAMATAT HHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHCCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA