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The map label for this gene is ywmD [H]

Identifier: 183219595

GI number: 183219595

Start: 165055

End: 166161

Strand: Reverse

Name: ywmD [H]

Synonym: LEPBI_I0170

Alternate gene names: 183219595

Gene position: 166161-165055 (Counterclockwise)

Preceding gene: 183219596

Following gene: 183219594

Centisome position: 4.62

GC content: 43.81

Gene sequence:

>1107_bases
GTGGGGTGTGGGAAATTCCCACTCAAAATTATTTTTCTTCTGATTCCTGTTGTCCTATTCTTTTTACACCTTTCACTTTT
ACCCCAATCAAATCATAACAAACGTTATGTTTTCATCTTAGATGCCAGTGGTTCCATGTCCGAAAAATGGGATGGAAAAA
CTCGGATGGCGGTTGCCAAAGAAAAACTCATACAGGTGTTAGGTGGTCTTCCGAAAGATGCCAGTGTGGGACTTGTCGCC
TATGGAAATCGGATTGCAGGATGTCAATCAGCAAGACTCTACCACCCCATCCAAAAGGGGGGAGCCTCCATTGTGAGTCA
AAAACTGACGACTATTGTGCCAGCCGGTTCCACTCCTATTGCCCAAACCTTACAAGTCGTAGGTGAATACCTTTTGAGTG
ATCAATTGGAAACTGAAATTATATTCATATCCGATGGTGTGGAAAGTTGTGAAGGGGACCCAAAATCAGTTTTGTACAAC
TTACGACAATCAGGAAAAAAATTTCGATTGCAGATCCTAGGCATAGACATTGATCCCAAAGGGGAAGAAGACTTAAAACG
ACTCTCGATCCTTGGGGATGGAAATTATTTTCCGCTCAAAACGCCAGAAGACTACGACCGTTCCTTCCAAAGGATTTTTG
CCCATCTGGAAACCAAAGAATCGACAATTCCATCACTCTCTCCTCCAGTGAAGGTTTCTCCAGTGGCTCCGATTCCGACT
CTCCCAAACCAAGGGATGATCCAAATTGTGAGCATCCTTCCGTATGAGGAAGGATCTGAAAATGGATACATTGTCAATTA
TGAATATTCGGCAACACATCCCACCCAATACATGATCCAACTGTACCTCTACCCTGAGGAAGAAAAACGAAGGAGTTTTC
CCATTCCACCGCTGAGAGAACGAAGGATGGGAGACACAGTCAAACAATTGGTGGAATTAAAGGAAGGGAAAGAGGGAAAG
GGTCGATTCGTTTTGTCGCTTCCCACTGGAAAACGGCTGAAATCATCCCTAGAACTTTGGGATATGTCGGGAGTTCCCAA
AATTATTGCCTTATCTGTGGAAAAACCCATTCACGAGAAACCGGGTTTTGACCGAAATGATAGGTAA

Upstream 100 bases:

>100_bases
ACCTCACAAAACCGCCATATTTGGACCCCAAATCCCTCTAAGGGGAAATGGATTTTTCGCCGATCTTGTACAAGTGCGAA
AACAAATGGAATCTCAGATG

Downstream 100 bases:

>100_bases
TGAGACAGAATTCTAAACAATGGCTGGGTTTTTCGTTTGGACTTTTGTTCCTTATTTTCTTTGGAACGGGATCTTTTCTT
TCCCTCCAAGCAGAACGTTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 368; Mature: 367

Protein sequence:

>368_residues
MGCGKFPLKIIFLLIPVVLFFLHLSLLPQSNHNKRYVFILDASGSMSEKWDGKTRMAVAKEKLIQVLGGLPKDASVGLVA
YGNRIAGCQSARLYHPIQKGGASIVSQKLTTIVPAGSTPIAQTLQVVGEYLLSDQLETEIIFISDGVESCEGDPKSVLYN
LRQSGKKFRLQILGIDIDPKGEEDLKRLSILGDGNYFPLKTPEDYDRSFQRIFAHLETKESTIPSLSPPVKVSPVAPIPT
LPNQGMIQIVSILPYEEGSENGYIVNYEYSATHPTQYMIQLYLYPEEEKRRSFPIPPLRERRMGDTVKQLVELKEGKEGK
GRFVLSLPTGKRLKSSLELWDMSGVPKIIALSVEKPIHEKPGFDRNDR

Sequences:

>Translated_368_residues
MGCGKFPLKIIFLLIPVVLFFLHLSLLPQSNHNKRYVFILDASGSMSEKWDGKTRMAVAKEKLIQVLGGLPKDASVGLVA
YGNRIAGCQSARLYHPIQKGGASIVSQKLTTIVPAGSTPIAQTLQVVGEYLLSDQLETEIIFISDGVESCEGDPKSVLYN
LRQSGKKFRLQILGIDIDPKGEEDLKRLSILGDGNYFPLKTPEDYDRSFQRIFAHLETKESTIPSLSPPVKVSPVAPIPT
LPNQGMIQIVSILPYEEGSENGYIVNYEYSATHPTQYMIQLYLYPEEEKRRSFPIPPLRERRMGDTVKQLVELKEGKEGK
GRFVLSLPTGKRLKSSLELWDMSGVPKIIALSVEKPIHEKPGFDRNDR
>Mature_367_residues
GCGKFPLKIIFLLIPVVLFFLHLSLLPQSNHNKRYVFILDASGSMSEKWDGKTRMAVAKEKLIQVLGGLPKDASVGLVAY
GNRIAGCQSARLYHPIQKGGASIVSQKLTTIVPAGSTPIAQTLQVVGEYLLSDQLETEIIFISDGVESCEGDPKSVLYNL
RQSGKKFRLQILGIDIDPKGEEDLKRLSILGDGNYFPLKTPEDYDRSFQRIFAHLETKESTIPSLSPPVKVSPVAPIPTL
PNQGMIQIVSILPYEEGSENGYIVNYEYSATHPTQYMIQLYLYPEEEKRRSFPIPPLRERRMGDTVKQLVELKEGKEGKG
RFVLSLPTGKRLKSSLELWDMSGVPKIIALSVEKPIHEKPGFDRNDR

Specific function: Unknown

COG id: COG2304

COG function: function code R; Uncharacterized protein containing a von Willebrand factor type A (vWA) domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis ywmC [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002035 [H]

Pfam domain/function: PF00092 VWA [H]

EC number: NA

Molecular weight: Translated: 41083; Mature: 40952

Theoretical pI: Translated: 8.91; Mature: 8.91

Prosite motif: PS50234 VWFA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGCGKFPLKIIFLLIPVVLFFLHLSLLPQSNHNKRYVFILDASGSMSEKWDGKTRMAVAK
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHH
EKLIQVLGGLPKDASVGLVAYGNRIAGCQSARLYHPIQKGGASIVSQKLTTIVPAGSTPI
HHHHHHHCCCCCCCCEEEEEECCEECCCCCCHHHCHHHHCCHHHHHHHHHEEECCCCCCH
AQTLQVVGEYLLSDQLETEIIFISDGVESCEGDPKSVLYNLRQSGKKFRLQILGIDIDPK
HHHHHHHHHHHHCCCCCEEEEEEECCHHHHCCCHHHHHHHHHHCCCEEEEEEEEEECCCC
GEEDLKRLSILGDGNYFPLKTPEDYDRSFQRIFAHLETKESTIPSLSPPVKVSPVAPIPT
CHHHHHHEEEEECCCEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCC
LPNQGMIQIVSILPYEEGSENGYIVNYEYSATHPTQYMIQLYLYPEEEKRRSFPIPPLRE
CCCCCCEEEEEECCCCCCCCCCEEEEEECCCCCCCEEEEEEEECCCHHHHCCCCCCCHHH
RRMGDTVKQLVELKEGKEGKGRFVLSLPTGKRLKSSLELWDMSGVPKIIALSVEKPIHEK
HHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCCCCCCC
PGFDRNDR
CCCCCCCC
>Mature Secondary Structure 
GCGKFPLKIIFLLIPVVLFFLHLSLLPQSNHNKRYVFILDASGSMSEKWDGKTRMAVAK
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHH
EKLIQVLGGLPKDASVGLVAYGNRIAGCQSARLYHPIQKGGASIVSQKLTTIVPAGSTPI
HHHHHHHCCCCCCCCEEEEEECCEECCCCCCHHHCHHHHCCHHHHHHHHHEEECCCCCCH
AQTLQVVGEYLLSDQLETEIIFISDGVESCEGDPKSVLYNLRQSGKKFRLQILGIDIDPK
HHHHHHHHHHHHCCCCCEEEEEEECCHHHHCCCHHHHHHHHHHCCCEEEEEEEEEECCCC
GEEDLKRLSILGDGNYFPLKTPEDYDRSFQRIFAHLETKESTIPSLSPPVKVSPVAPIPT
CHHHHHHEEEEECCCEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCC
LPNQGMIQIVSILPYEEGSENGYIVNYEYSATHPTQYMIQLYLYPEEEKRRSFPIPPLRE
CCCCCCEEEEEECCCCCCCCCCEEEEEECCCCCCCEEEEEEEECCCHHHHCCCCCCCHHH
RRMGDTVKQLVELKEGKEGKGRFVLSLPTGKRLKSSLELWDMSGVPKIIALSVEKPIHEK
HHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEEECCCCCCCC
PGFDRNDR
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377 [H]