Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is 18311540

Identifier: 18311540

GI number: 18311540

Start: 2928405

End: 2929490

Strand: Reverse

Name: 18311540

Synonym: CPE2558

Alternate gene names: NA

Gene position: 2929490-2928405 (Counterclockwise)

Preceding gene: 18311542

Following gene: 18311539

Centisome position: 96.64

GC content: 28.64

Gene sequence:

>1086_bases
ATGGTTAAAAAGATTATGGCATCCTTAATTATTGGATCTTTATTTCTTTTCATGGGCTGTAATAGAATAAGTAATACGGT
CAATGATAATAAGGAGCTAAAGGAAAGTGTTGAAAGTATATATTTTAATAATAAGATAGCAATATCAATTGCAGAGGAAT
ATATGGAGGCTCTTAAAAGTAATGATTTAGAAAAGATAAAAAGGTTATCTGATAAAGAGGTTGATAAAAATATAATAATT
AGTCCTAGTAAGGATCTTGAAATAACAGGGATTAAGCAAGTTGGGTCAGCGCAATTAGGAAATAAAACTATGTTTAAATT
CTATGTAACTAGAACTAAAGAAGGAGAGCCTAAGGCTGATTTAGAGCAATATTATTTAGAAGTTAGAAAAACTGAAGAGG
GAGAATATAAGGTATCAGAACTTAAATCAACTGAGCTTTATAGTGTTTTTTTAGATAAGGATAAATTAAAGATTAGAAAA
GATGATGATGTTGAGATTAACACATTAATAGATTTAAAGAGCATACCAGATAAAATTTATCCAAAGGTTAATGTTATAGA
TGTAGCCAAGGTTGATGTACCTAAAGAAGCTTTTTCAGCCGTAGAAATTTCATTTTCAGGAGATAAAGTAGCAATTTCAA
CATATAAGGGTGAAGATTCTTATATAGGAGTGGTTGATGTTGAGGATGCACAGGAGACTGCAGCTAAAGAAGGGGAAGAT
GAAGGGGGAAAAGAAGATGAAAAGAATGATGATAAAACTTTAGGGAAAAAGATAACATCATTAGATGTATTAAATGGATG
TAAAATTTCTAGCTTAAATTTTTCAGATGATGATGGATATGTTGTTGTAAATTATGTTAAAGGAAATGGCACAAGATTTA
AGGTTTATCAAAGTGGTGGAAGTATAGTTTCATTAGAATTAGATGATATATTTGCAGAAGAGGAATATAATCTTATTTAT
GAAAGAATACAGGATAACAATATAATTATGAATGTTACTCCAATAATAAAATCAAATAATACTGAAAGTGGCTTAATTGG
AAGATATAAAATATCTCTAAAAGATTTTAAACTTGAAAAACTATAG

Upstream 100 bases:

>100_bases
AAGTAAAAATTAAGTTTAGGATATTTATTATTTTATTAATACTTTTAGGCTATTTGGAAAACCTAAAATAGGACTTATTC
TAAGGGAGGAATGATTATAA

Downstream 100 bases:

>100_bases
TATAATATAAAATAAGTTAATCATAACCCTTAAATTTATGATTAACTTTTTTATTTTAAAGAAATTTTGATTTTAATGAA
AAGGTGATATAAATGGAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: Phage Head-Tail Adaptor

Number of amino acids: Translated: 361; Mature: 361

Protein sequence:

>361_residues
MVKKIMASLIIGSLFLFMGCNRISNTVNDNKELKESVESIYFNNKIAISIAEEYMEALKSNDLEKIKRLSDKEVDKNIII
SPSKDLEITGIKQVGSAQLGNKTMFKFYVTRTKEGEPKADLEQYYLEVRKTEEGEYKVSELKSTELYSVFLDKDKLKIRK
DDDVEINTLIDLKSIPDKIYPKVNVIDVAKVDVPKEAFSAVEISFSGDKVAISTYKGEDSYIGVVDVEDAQETAAKEGED
EGGKEDEKNDDKTLGKKITSLDVLNGCKISSLNFSDDDGYVVVNYVKGNGTRFKVYQSGGSIVSLELDDIFAEEEYNLIY
ERIQDNNIIMNVTPIIKSNNTESGLIGRYKISLKDFKLEKL

Sequences:

>Translated_361_residues
MVKKIMASLIIGSLFLFMGCNRISNTVNDNKELKESVESIYFNNKIAISIAEEYMEALKSNDLEKIKRLSDKEVDKNIII
SPSKDLEITGIKQVGSAQLGNKTMFKFYVTRTKEGEPKADLEQYYLEVRKTEEGEYKVSELKSTELYSVFLDKDKLKIRK
DDDVEINTLIDLKSIPDKIYPKVNVIDVAKVDVPKEAFSAVEISFSGDKVAISTYKGEDSYIGVVDVEDAQETAAKEGED
EGGKEDEKNDDKTLGKKITSLDVLNGCKISSLNFSDDDGYVVVNYVKGNGTRFKVYQSGGSIVSLELDDIFAEEEYNLIY
ERIQDNNIIMNVTPIIKSNNTESGLIGRYKISLKDFKLEKL
>Mature_361_residues
MVKKIMASLIIGSLFLFMGCNRISNTVNDNKELKESVESIYFNNKIAISIAEEYMEALKSNDLEKIKRLSDKEVDKNIII
SPSKDLEITGIKQVGSAQLGNKTMFKFYVTRTKEGEPKADLEQYYLEVRKTEEGEYKVSELKSTELYSVFLDKDKLKIRK
DDDVEINTLIDLKSIPDKIYPKVNVIDVAKVDVPKEAFSAVEISFSGDKVAISTYKGEDSYIGVVDVEDAQETAAKEGED
EGGKEDEKNDDKTLGKKITSLDVLNGCKISSLNFSDDDGYVVVNYVKGNGTRFKVYQSGGSIVSLELDDIFAEEEYNLIY
ERIQDNNIIMNVTPIIKSNNTESGLIGRYKISLKDFKLEKL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40640; Mature: 40640

Theoretical pI: Translated: 4.56; Mature: 4.56

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKKIMASLIIGSLFLFMGCNRISNTVNDNKELKESVESIYFNNKIAISIAEEYMEALKS
CHHHHHHHHHHHHHHHHHCCHHHHCCCCCCHHHHHHHHHHHCCCEEEEEEHHHHHHHHHC
NDLEKIKRLSDKEVDKNIIISPSKDLEITGIKQVGSAQLGNKTMFKFYVTRTKEGEPKAD
CCHHHHHHCCCCCCCCCEEECCCCCEEEEECHHCCCCCCCCCEEEEEEEEECCCCCCCHH
LEQYYLEVRKTEEGEYKVSELKSTELYSVFLDKDKLKIRKDDDVEINTLIDLKSIPDKIY
HHHHHHHHHCCCCCCEEHHHCCCCEEEEEEECCCCEEEECCCCCEEEEEEEHHHCCHHHC
PKVNVIDVAKVDVPKEAFSAVEISFSGDKVAISTYKGEDSYIGVVDVEDAQETAAKEGED
CCCEEEEEEECCCCHHHHCEEEEEECCCEEEEEEECCCCCEEEEEECCCHHHHHHHCCCC
EGGKEDEKNDDKTLGKKITSLDVLNGCKISSLNFSDDDGYVVVNYVKGNGTRFKVYQSGG
CCCCCCCCCCHHHHHHHHHHEECCCCCEEEECCCCCCCCEEEEEEEECCCCEEEEEECCC
SIVSLELDDIFAEEEYNLIYERIQDNNIIMNVTPIIKSNNTESGLIGRYKISLKDFKLEK
CEEEEEHHHHHCCCHHHHHHHHHCCCCEEEEEEEEEECCCCCCCEEEEEEEEEECEEECC
L
C
>Mature Secondary Structure
MVKKIMASLIIGSLFLFMGCNRISNTVNDNKELKESVESIYFNNKIAISIAEEYMEALKS
CHHHHHHHHHHHHHHHHHCCHHHHCCCCCCHHHHHHHHHHHCCCEEEEEEHHHHHHHHHC
NDLEKIKRLSDKEVDKNIIISPSKDLEITGIKQVGSAQLGNKTMFKFYVTRTKEGEPKAD
CCHHHHHHCCCCCCCCCEEECCCCCEEEEECHHCCCCCCCCCEEEEEEEEECCCCCCCHH
LEQYYLEVRKTEEGEYKVSELKSTELYSVFLDKDKLKIRKDDDVEINTLIDLKSIPDKIY
HHHHHHHHHCCCCCCEEHHHCCCCEEEEEEECCCCEEEECCCCCEEEEEEEHHHCCHHHC
PKVNVIDVAKVDVPKEAFSAVEISFSGDKVAISTYKGEDSYIGVVDVEDAQETAAKEGED
CCCEEEEEEECCCCHHHHCEEEEEECCCEEEEEEECCCCCEEEEEECCCHHHHHHHCCCC
EGGKEDEKNDDKTLGKKITSLDVLNGCKISSLNFSDDDGYVVVNYVKGNGTRFKVYQSGG
CCCCCCCCCCHHHHHHHHHHEECCCCCEEEECCCCCCCCEEEEEEEECCCCEEEEEECCC
SIVSLELDDIFAEEEYNLIYERIQDNNIIMNVTPIIKSNNTESGLIGRYKISLKDFKLEK
CEEEEEHHHHHCCCHHHHHHHHHCCCCEEEEEEEEEECCCCCCCEEEEEEEEEECEEECC
L
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA