| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is adhE [H]
Identifier: 18311513
GI number: 18311513
Start: 2899180
End: 2901777
Strand: Reverse
Name: adhE [H]
Synonym: CPE2531
Alternate gene names: 18311513
Gene position: 2901777-2899180 (Counterclockwise)
Preceding gene: 18311514
Following gene: 18311512
Centisome position: 95.72
GC content: 35.45
Gene sequence:
>2598_bases ATGAAAGTAACAAACGTAGATGAATTAATGCTTAGATTAGAGAAAGTTAGAGCAGCTCAAAAAGAGTTCTCAAAATTCTC TCAAGAGCAAGTAGATGAAATATTTAGACAAGCAGCAGTAGCAGCTAATAATGAGAGAATCAGATTAGCAAAAATGGCTG TTGAAGAATCAGGAATGGGTATAGTTGAAGATAAAGTTATAAAAAACCATTTTGCTGCAGAATATATATACAATAAATAT AAAGATGAAAAAACTTGTGGAGTTATAGAAAAAGATGAATCATTTGGTATCACTAAAATAGCTGAACCAATAGGAGTTGT AGCAGCAATCGTTCCTACTACAAACCCAACATCAACAGCTATATTCAAAGCTTTAATATCATTAAAGACTAGAAACGCTG TATTCTTTTCACCACATCCAAGAGCTAAAAACTCAACAATAGAAGCAGCTAGAGTTGTTTTAGAAGCAGCTGTTAAAGCT GGAGCTCCAAAAGATATAATCGGATGGATAGATGAGCCATCAGTTGAAATGTCACAAGTATTAATGGCAGAAGCTGATAT CATACTAGCTACTGGTGGTCCAGGAATGGTTAAAGCAGCTTACTCATCAGGAAAACCAGCTATCGGGGTTGGAGCAGGTA ATACACCAGCAATCATAGATGAAACAGCTCACTTAAAAATGGCAGTAAACTCAATATTATTATCAAAAACTTTCGATAAC GGTGTTATCTGTGCATCAGAGCAAACAGTATTAGTTGTTGATAAAGTTTATGATGAGGTAAGAAAAGAGTTCGCTGATAG AGGAGCTTACTTCTTAAAAGATAAAGAAATAGATAAAGTAAGAAAAACAATTTTAATAAATGGTAACTTAAATGCTAACA TAGTTGGTCAATCAGCATGGAAAATAGCTGACATGGCAGGTGTTAAGGTTCCAAAAGATACTAAAGTTTTAATTGGTGAA GTTGAGTCAGTTGAATTAGAAGAACCATTCTCACATGAAAAATTATCACCAGTATTAGGAATGTACAGAGTAGCTAACTT TGAAGAAGCTTTAGTTAAAGCTGAAAGATTAGTTGAACTTGGTGGATTCGGACATACTTCAGTTTTATACACTGATACAA TGAAATCACAAGACAGAGTTCAAAAATTCGGTGCAACTATGAAAACTGGTAGAACAATAATAAATATGCCATCAACTCAA GGAGCTATCGGAGATATATACAACTTCAAGCTAGCACCATCATTAACATTAGGTTGTGGATCATGGGGTGGAAACTCAGT TTCAGAAAACGTTGGTCCTAAACACTTAATGAATGTTAAGAGTGTAGCTGAGAGGAGAGAAAATATGCTTTGGTTCAGAG TTCCAGAAAAAGTTTACTTCAAATATGGTGCTTTAGGAGTTGCTCTTAGAGAATTAAAAGATTTAAACAAGAAAAAAGTA TTTATAGTAACAGACAACGTACTAGCTAGTCTAGGATATGTTGATAAAATAACAAGTGTTTTAGAAGAAATAGGTGTAGA TTTCAGAGTATTCTCAGAAGTTACTCCAGACCCAACTTTAGCATGTGCTAAAAAAGGTGCTGAAGCAATGAGAAGCTATC AACCAGATGCAATCATAGCTCTTGGTGGAGGTTCACCAATGGACGCTGCTAAGATTATGTGGGTAATGTATGAGCATCCA GAAGTTGCTTTCGAAGATTTAGCAATGAGATTCATGGATATAAGAAAGAGAGTTTACCCATTCCCAACTATGGGTCAAAA AGCTATGATGATTTCAGTTCCAACATCAGCTGGTACTGGTTCAGAAGTAACACCATTCGCAGTTATAACTGATGAAGAAT CAGGAGTAAAATATCCATTAGCAGATTACGAGTTAACTCCAGATATGGCTATCATAGATGCTGAGCTTATGATGAACATG CCAAAAGGATTAACAGCTGCATCAGGTATAGACGCATTAACTCATGCTTTAGAAGCTTACGTTTCAGTTTTAGCATCAGA GTACACTAATGGATTAGCTTTAGAAGCTATAAGATTAATATTTAAATACTTACCACAAGCTTACGCTGAAGGTACTACAA ACATAAAAGCAAGAGAAAAAATGGCTCATGCTTCAACAATGGCTGGTATGGCATTCGCTAACGCATTCTTAGGAGTATGT CACTCAATGGCACACAAATTAGGATCAGAACACCATATAGCACACGGAGTTGCTAACGGAATCTTAATAGACCATGTAAT AAGATTCAACGCTGTTGACAACCCAAGAAAACAAGCTGCATTCCCACAATACAAATATCCAAATGCTAAATGGAGATATG CAGTAATCGCTGACTACTTAGGATTAGGTGGAAAGAACGAAGAAGAAAAAGTTAATAACTTAATCAAGGCTATAGATAAC CTTAAGAAAACAGTTGGAATTCCTGCAACAATAGCTGACTGTGGAGTTTCAAAAGAATCATTCTACGCTACATTAGAAAA AATGAGTGAAGATGCATTCGATGACCAATGTACAGGTGCTAACCCAAGATACCCATTAATAAGTGAAATCAAGCAAATGT ACATCAATGCTTTCGAAGGTAAAAAAGACAGAGTTTAA
Upstream 100 bases:
>100_bases AATGGAATTTTATTAAAGTTAAAAACTTAACTAAATGCTTTTAATTAATTTTTACATATATTATGAAAATAAGAAACTAA TCTATAATGAGGTGGGTATC
Downstream 100 bases:
>100_bases TAGCTTTGAAATAAGATAATAATAAATACTCACTAGATTATCTAGTGAGTATTTTTTTCTATAAAAATATGTAAAGATGT ACTATTTGTTAAGATTTTAA
Product: bifunctional acetaldehyde-CoA/alcohol dehydrogenase
Products: NA
Alternate protein names: Alcohol dehydrogenase; ADH; Acetaldehyde dehydrogenase [acetylating]; ACDH [H]
Number of amino acids: Translated: 865; Mature: 865
Protein sequence:
>865_residues MKVTNVDELMLRLEKVRAAQKEFSKFSQEQVDEIFRQAAVAANNERIRLAKMAVEESGMGIVEDKVIKNHFAAEYIYNKY KDEKTCGVIEKDESFGITKIAEPIGVVAAIVPTTNPTSTAIFKALISLKTRNAVFFSPHPRAKNSTIEAARVVLEAAVKA GAPKDIIGWIDEPSVEMSQVLMAEADIILATGGPGMVKAAYSSGKPAIGVGAGNTPAIIDETAHLKMAVNSILLSKTFDN GVICASEQTVLVVDKVYDEVRKEFADRGAYFLKDKEIDKVRKTILINGNLNANIVGQSAWKIADMAGVKVPKDTKVLIGE VESVELEEPFSHEKLSPVLGMYRVANFEEALVKAERLVELGGFGHTSVLYTDTMKSQDRVQKFGATMKTGRTIINMPSTQ GAIGDIYNFKLAPSLTLGCGSWGGNSVSENVGPKHLMNVKSVAERRENMLWFRVPEKVYFKYGALGVALRELKDLNKKKV FIVTDNVLASLGYVDKITSVLEEIGVDFRVFSEVTPDPTLACAKKGAEAMRSYQPDAIIALGGGSPMDAAKIMWVMYEHP EVAFEDLAMRFMDIRKRVYPFPTMGQKAMMISVPTSAGTGSEVTPFAVITDEESGVKYPLADYELTPDMAIIDAELMMNM PKGLTAASGIDALTHALEAYVSVLASEYTNGLALEAIRLIFKYLPQAYAEGTTNIKAREKMAHASTMAGMAFANAFLGVC HSMAHKLGSEHHIAHGVANGILIDHVIRFNAVDNPRKQAAFPQYKYPNAKWRYAVIADYLGLGGKNEEEKVNNLIKAIDN LKKTVGIPATIADCGVSKESFYATLEKMSEDAFDDQCTGANPRYPLISEIKQMYINAFEGKKDRV
Sequences:
>Translated_865_residues MKVTNVDELMLRLEKVRAAQKEFSKFSQEQVDEIFRQAAVAANNERIRLAKMAVEESGMGIVEDKVIKNHFAAEYIYNKY KDEKTCGVIEKDESFGITKIAEPIGVVAAIVPTTNPTSTAIFKALISLKTRNAVFFSPHPRAKNSTIEAARVVLEAAVKA GAPKDIIGWIDEPSVEMSQVLMAEADIILATGGPGMVKAAYSSGKPAIGVGAGNTPAIIDETAHLKMAVNSILLSKTFDN GVICASEQTVLVVDKVYDEVRKEFADRGAYFLKDKEIDKVRKTILINGNLNANIVGQSAWKIADMAGVKVPKDTKVLIGE VESVELEEPFSHEKLSPVLGMYRVANFEEALVKAERLVELGGFGHTSVLYTDTMKSQDRVQKFGATMKTGRTIINMPSTQ GAIGDIYNFKLAPSLTLGCGSWGGNSVSENVGPKHLMNVKSVAERRENMLWFRVPEKVYFKYGALGVALRELKDLNKKKV FIVTDNVLASLGYVDKITSVLEEIGVDFRVFSEVTPDPTLACAKKGAEAMRSYQPDAIIALGGGSPMDAAKIMWVMYEHP EVAFEDLAMRFMDIRKRVYPFPTMGQKAMMISVPTSAGTGSEVTPFAVITDEESGVKYPLADYELTPDMAIIDAELMMNM PKGLTAASGIDALTHALEAYVSVLASEYTNGLALEAIRLIFKYLPQAYAEGTTNIKAREKMAHASTMAGMAFANAFLGVC HSMAHKLGSEHHIAHGVANGILIDHVIRFNAVDNPRKQAAFPQYKYPNAKWRYAVIADYLGLGGKNEEEKVNNLIKAIDN LKKTVGIPATIADCGVSKESFYATLEKMSEDAFDDQCTGANPRYPLISEIKQMYINAFEGKKDRV >Mature_865_residues MKVTNVDELMLRLEKVRAAQKEFSKFSQEQVDEIFRQAAVAANNERIRLAKMAVEESGMGIVEDKVIKNHFAAEYIYNKY KDEKTCGVIEKDESFGITKIAEPIGVVAAIVPTTNPTSTAIFKALISLKTRNAVFFSPHPRAKNSTIEAARVVLEAAVKA GAPKDIIGWIDEPSVEMSQVLMAEADIILATGGPGMVKAAYSSGKPAIGVGAGNTPAIIDETAHLKMAVNSILLSKTFDN GVICASEQTVLVVDKVYDEVRKEFADRGAYFLKDKEIDKVRKTILINGNLNANIVGQSAWKIADMAGVKVPKDTKVLIGE VESVELEEPFSHEKLSPVLGMYRVANFEEALVKAERLVELGGFGHTSVLYTDTMKSQDRVQKFGATMKTGRTIINMPSTQ GAIGDIYNFKLAPSLTLGCGSWGGNSVSENVGPKHLMNVKSVAERRENMLWFRVPEKVYFKYGALGVALRELKDLNKKKV FIVTDNVLASLGYVDKITSVLEEIGVDFRVFSEVTPDPTLACAKKGAEAMRSYQPDAIIALGGGSPMDAAKIMWVMYEHP EVAFEDLAMRFMDIRKRVYPFPTMGQKAMMISVPTSAGTGSEVTPFAVITDEESGVKYPLADYELTPDMAIIDAELMMNM PKGLTAASGIDALTHALEAYVSVLASEYTNGLALEAIRLIFKYLPQAYAEGTTNIKAREKMAHASTMAGMAFANAFLGVC HSMAHKLGSEHHIAHGVANGILIDHVIRFNAVDNPRKQAAFPQYKYPNAKWRYAVIADYLGLGGKNEEEKVNNLIKAIDN LKKTVGIPATIADCGVSKESFYATLEKMSEDAFDDQCTGANPRYPLISEIKQMYINAFEGKKDRV
Specific function: This enzyme has probably two activities:ADH, and ACDH [H]
COG id: COG1012
COG function: function code C; NAD-dependent aldehyde dehydrogenases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the iron- containing alcohol dehydrogenase family [H]
Homologues:
Organism=Homo sapiens, GI133922590, Length=276, Percent_Identity=30.0724637681159, Blast_Score=93, Evalue=9e-19, Organism=Escherichia coli, GI1787493, Length=865, Percent_Identity=64.971098265896, Blast_Score=1148, Evalue=0.0, Organism=Escherichia coli, GI1789163, Length=405, Percent_Identity=36.5432098765432, Blast_Score=238, Evalue=1e-63, Organism=Escherichia coli, GI48994951, Length=403, Percent_Identity=36.2282878411911, Blast_Score=233, Evalue=4e-62, Organism=Escherichia coli, GI87082107, Length=406, Percent_Identity=32.512315270936, Blast_Score=202, Evalue=1e-52, Organism=Escherichia coli, GI1788797, Length=361, Percent_Identity=34.6260387811634, Blast_Score=178, Evalue=1e-45, Organism=Escherichia coli, GI1789386, Length=393, Percent_Identity=23.1552162849873, Blast_Score=77, Evalue=4e-15, Organism=Caenorhabditis elegans, GI17537053, Length=292, Percent_Identity=28.0821917808219, Blast_Score=114, Evalue=2e-25, Organism=Saccharomyces cerevisiae, GI6321181, Length=420, Percent_Identity=32.3809523809524, Blast_Score=211, Evalue=4e-55, Organism=Drosophila melanogaster, GI24657991, Length=330, Percent_Identity=28.4848484848485, Blast_Score=91, Evalue=4e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001670 - InterPro: IPR018211 - InterPro: IPR016161 - InterPro: IPR016163 - InterPro: IPR016162 - InterPro: IPR015590 - InterPro: IPR012079 [H]
Pfam domain/function: PF00171 Aldedh; PF00465 Fe-ADH [H]
EC number: =1.1.1.1; =1.2.1.10 [H]
Molecular weight: Translated: 94641; Mature: 94641
Theoretical pI: Translated: 6.58; Mature: 6.58
Prosite motif: PS00913 ADH_IRON_1 ; PS00060 ADH_IRON_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVTNVDELMLRLEKVRAAQKEFSKFSQEQVDEIFRQAAVAANNERIRLAKMAVEESGMG CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHCCCC IVEDKVIKNHFAAEYIYNKYKDEKTCGVIEKDESFGITKIAEPIGVVAAIVPTTNPTSTA CHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCHHHHHHHHHEEEEEECCCCCHHHH IFKALISLKTRNAVFFSPHPRAKNSTIEAARVVLEAAVKAGAPKDIIGWIDEPSVEMSQV HHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHCCCCCCCHHHHHH LMAEADIILATGGPGMVKAAYSSGKPAIGVGAGNTPAIIDETAHLKMAVNSILLSKTFDN HHHCCCEEEEECCCCCEEEECCCCCCEEEECCCCCCCEECCHHHHHHHHHHHHHHCCCCC GVICASEQTVLVVDKVYDEVRKEFADRGAYFLKDKEIDKVRKTILINGNLNANIVGQSAW CEEEECCCEEEEHHHHHHHHHHHHHHCCCEEECCCHHHHHHHEEEEECCCCCEEECCCHH KIADMAGVKVPKDTKVLIGEVESVELEEPFSHEKLSPVLGMYRVANFEEALVKAERLVEL HHHHHCCCCCCCCCEEEEECCCCEECCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHH GGFGHTSVLYTDTMKSQDRVQKFGATMKTGRTIINMPSTQGAIGDIYNFKLAPSLTLGCG CCCCCCEEEEECCCCHHHHHHHHCCHHHCCCEEEECCCCCCCCCCCEEEEECCCEEEECC SWGGNSVSENVGPKHLMNVKSVAERRENMLWFRVPEKVYFKYGALGVALRELKDLNKKKV CCCCCCCCCCCCHHHHHHHHHHHHHHHCEEEEECCHHHHHHHHHHHHHHHHHHCCCCCEE FIVTDNVLASLGYVDKITSVLEEIGVDFRVFSEVTPDPTLACAKKGAEAMRSYQPDAIIA EEEECHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCCEEEE LGGGSPMDAAKIMWVMYEHPEVAFEDLAMRFMDIRKRVYPFPTMGQKAMMISVPTSAGTG ECCCCCCCHHHEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCC SEVTPFAVITDEESGVKYPLADYELTPDMAIIDAELMMNMPKGLTAASGIDALTHALEAY CCCCCEEEEECCCCCCCCCCCCCCCCCCHHEEEHHHHHCCCCCCCHHHHHHHHHHHHHHH VSVLASEYTNGLALEAIRLIFKYLPQAYAEGTTNIKAREKMAHASTMAGMAFANAFLGVC HHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH HSMAHKLGSEHHIAHGVANGILIDHVIRFNAVDNPRKQAAFPQYKYPNAKWRYAVIADYL HHHHHHCCCCCHHHHHHHCCHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCEEHHHHHHHH GLGGKNEEEKVNNLIKAIDNLKKTVGIPATIADCGVSKESFYATLEKMSEDAFDDQCTGA CCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCC NPRYPLISEIKQMYINAFEGKKDRV CCCCHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MKVTNVDELMLRLEKVRAAQKEFSKFSQEQVDEIFRQAAVAANNERIRLAKMAVEESGMG CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHCCCC IVEDKVIKNHFAAEYIYNKYKDEKTCGVIEKDESFGITKIAEPIGVVAAIVPTTNPTSTA CHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCHHHHHHHHHEEEEEECCCCCHHHH IFKALISLKTRNAVFFSPHPRAKNSTIEAARVVLEAAVKAGAPKDIIGWIDEPSVEMSQV HHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHCCCCCCCHHHHHH LMAEADIILATGGPGMVKAAYSSGKPAIGVGAGNTPAIIDETAHLKMAVNSILLSKTFDN HHHCCCEEEEECCCCCEEEECCCCCCEEEECCCCCCCEECCHHHHHHHHHHHHHHCCCCC GVICASEQTVLVVDKVYDEVRKEFADRGAYFLKDKEIDKVRKTILINGNLNANIVGQSAW CEEEECCCEEEEHHHHHHHHHHHHHHCCCEEECCCHHHHHHHEEEEECCCCCEEECCCHH KIADMAGVKVPKDTKVLIGEVESVELEEPFSHEKLSPVLGMYRVANFEEALVKAERLVEL HHHHHCCCCCCCCCEEEEECCCCEECCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHH GGFGHTSVLYTDTMKSQDRVQKFGATMKTGRTIINMPSTQGAIGDIYNFKLAPSLTLGCG CCCCCCEEEEECCCCHHHHHHHHCCHHHCCCEEEECCCCCCCCCCCEEEEECCCEEEECC SWGGNSVSENVGPKHLMNVKSVAERRENMLWFRVPEKVYFKYGALGVALRELKDLNKKKV CCCCCCCCCCCCHHHHHHHHHHHHHHHCEEEEECCHHHHHHHHHHHHHHHHHHCCCCCEE FIVTDNVLASLGYVDKITSVLEEIGVDFRVFSEVTPDPTLACAKKGAEAMRSYQPDAIIA EEEECHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCCEEEE LGGGSPMDAAKIMWVMYEHPEVAFEDLAMRFMDIRKRVYPFPTMGQKAMMISVPTSAGTG ECCCCCCCHHHEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCC SEVTPFAVITDEESGVKYPLADYELTPDMAIIDAELMMNMPKGLTAASGIDALTHALEAY CCCCCEEEEECCCCCCCCCCCCCCCCCCHHEEEHHHHHCCCCCCCHHHHHHHHHHHHHHH VSVLASEYTNGLALEAIRLIFKYLPQAYAEGTTNIKAREKMAHASTMAGMAFANAFLGVC HHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH HSMAHKLGSEHHIAHGVANGILIDHVIRFNAVDNPRKQAAFPQYKYPNAKWRYAVIADYL HHHHHHCCCCCHHHHHHHCCHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCEEHHHHHHHH GLGGKNEEEKVNNLIKAIDNLKKTVGIPATIADCGVSKESFYATLEKMSEDAFDDQCTGA CCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCC NPRYPLISEIKQMYINAFEGKKDRV CCCCHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8226639; 8300540; 11466286 [H]