| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is 18311508
Identifier: 18311508
GI number: 18311508
Start: 2892610
End: 2893119
Strand: Direct
Name: 18311508
Synonym: CPE2526
Alternate gene names: NA
Gene position: 2892610-2893119 (Clockwise)
Preceding gene: 18311507
Following gene: 18311516
Centisome position: 95.42
GC content: 29.61
Gene sequence:
>510_bases TTGTTTAAATTTAACCTGCAAACTATAGGTGCTAGAAACCTTAAAACTTCTCTTTCAGTATTTATATGCATTATAGTATT TGAACTATTAGGCCGTTCTAGTGCCTTTTTTGCTTGTATTGCTGCAATGATGTGCATGCAAGATACAGTTGAAAATTCAT ATAAAATGGGAAAAAACAGAATGCTTGGTACCTTTTTAGGTGCTATTGTTGGTTTGTTATTAACAGCCATATTTAATGTA TTAAGTATTCAGCACTTTATTGTTTATGCTCTTTTAACAGCCATAGGTACAACTATAGCAATTTACCTATGTATTTTGTT TAATTGTAAAGGAGCAATAAATAGTGCATGTATAGTTGTTTTTGCCATAATGACAAACTTAAAGGGAGTTGGCTCATATG ACTATGCTTTTAATAGAATCCTAGATACATTTATTGGGGTAATAATAGCTATTATAATTAATAGAGTTGTTTATCCTTAC CAAAAGAAAACTGAAGAGAAAACAAATTAA
Upstream 100 bases:
>100_bases TATAGAAGAAAAAATCTCTAGACTTGAAAAAGAAGTTAAAGATGATATAAAAAATCTAGAAGAAAATAAAAAGAACTAAT ATGATTTAGGAGGGAAATAT
Downstream 100 bases:
>100_bases TATATTTAAATAAAAGGACGTGTATCAAAATATAATAATAAAACTTACAAACATATTCCGAGAATTACTAGATTTCGCTA AGAATTTATAATCATTACTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 169; Mature: 169
Protein sequence:
>169_residues MFKFNLQTIGARNLKTSLSVFICIIVFELLGRSSAFFACIAAMMCMQDTVENSYKMGKNRMLGTFLGAIVGLLLTAIFNV LSIQHFIVYALLTAIGTTIAIYLCILFNCKGAINSACIVVFAIMTNLKGVGSYDYAFNRILDTFIGVIIAIIINRVVYPY QKKTEEKTN
Sequences:
>Translated_169_residues MFKFNLQTIGARNLKTSLSVFICIIVFELLGRSSAFFACIAAMMCMQDTVENSYKMGKNRMLGTFLGAIVGLLLTAIFNV LSIQHFIVYALLTAIGTTIAIYLCILFNCKGAINSACIVVFAIMTNLKGVGSYDYAFNRILDTFIGVIIAIIINRVVYPY QKKTEEKTN >Mature_169_residues MFKFNLQTIGARNLKTSLSVFICIIVFELLGRSSAFFACIAAMMCMQDTVENSYKMGKNRMLGTFLGAIVGLLLTAIFNV LSIQHFIVYALLTAIGTTIAIYLCILFNCKGAINSACIVVFAIMTNLKGVGSYDYAFNRILDTFIGVIIAIIINRVVYPY QKKTEEKTN
Specific function: Unknown
COG id: COG4129
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18729; Mature: 18729
Theoretical pI: Translated: 9.24; Mature: 9.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.6 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 7.7 %Cys+Met (Translated Protein) 3.6 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 7.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFKFNLQTIGARNLKTSLSVFICIIVFELLGRSSAFFACIAAMMCMQDTVENSYKMGKNR CCEECCHHHCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH MLGTFLGAIVGLLLTAIFNVLSIQHFIVYALLTAIGTTIAIYLCILFNCKGAINSACIVV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH FAIMTNLKGVGSYDYAFNRILDTFIGVIIAIIINRVVYPYQKKTEEKTN HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCC >Mature Secondary Structure MFKFNLQTIGARNLKTSLSVFICIIVFELLGRSSAFFACIAAMMCMQDTVENSYKMGKNR CCEECCHHHCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH MLGTFLGAIVGLLLTAIFNVLSIQHFIVYALLTAIGTTIAIYLCILFNCKGAINSACIVV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH FAIMTNLKGVGSYDYAFNRILDTFIGVIIAIIINRVVYPYQKKTEEKTN HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA