Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is 18311507

Identifier: 18311507

GI number: 18311507

Start: 2892007

End: 2892588

Strand: Direct

Name: 18311507

Synonym: CPE2525

Alternate gene names: NA

Gene position: 2892007-2892588 (Clockwise)

Preceding gene: 18311504

Following gene: 18311508

Centisome position: 95.4

GC content: 28.18

Gene sequence:

>582_bases
ATGAAAGGTTTAGCCCTACCTAAAATAGGTGCAAGAAACTTAAAGACAGCTTTGGCTGTAACTTTATGCATAGGATTCTT
TGAGCTAATACACAGACAATATCCTTTTTATGCTTGTATAGCAGCTGTAATCTGTATGAAAGATACTGTTGAAAACTCAT
ATAAAATGGGAAAAAGCAGAATGATTGGTACAATAACCGGTGGACTTGTTGGCTTAGCTTTAACTTTTATAGCTTTAAAC
TTTAACCTTACAAGATTCTCAGGAATAATAACAGGGATTGGAATAGTTATAACCATTTATCTGCTTAATGTTTTTAACAG
AAAAGGATCTGTTTCTATAGCATGTATAGTATTAATAGCAATTATGACAAACTTACATGGTAAGGCTCCATATGCTTATG
CAGTTGATAGAATTATAGATACTTTTATAGGTATAATAATTGCTCTATTAATAAATAACTACATATATAAATATGAAAAT
AAGGTAAAAAAAGATTTAGAAAATATAGAAGAAAAAATCTCTAGACTTGAAAAAGAAGTTAAAGATGATATAAAAAATCT
AGAAGAAAATAAAAAGAACTAA

Upstream 100 bases:

>100_bases
GAATTCTTTAAAATTCTTGTTAAGTCATAATTTGTATTAATATAAAAATGTTATATACTATCTATAATAATATATAAATT
GTCGGGGAGGTATTATTTAA

Downstream 100 bases:

>100_bases
TATGATTTAGGAGGGAAATATTTGTTTAAATTTAACCTGCAAACTATAGGTGCTAGAAACCTTAAAACTTCTCTTTCAGT
ATTTATATGCATTATAGTAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 193; Mature: 193

Protein sequence:

>193_residues
MKGLALPKIGARNLKTALAVTLCIGFFELIHRQYPFYACIAAVICMKDTVENSYKMGKSRMIGTITGGLVGLALTFIALN
FNLTRFSGIITGIGIVITIYLLNVFNRKGSVSIACIVLIAIMTNLHGKAPYAYAVDRIIDTFIGIIIALLINNYIYKYEN
KVKKDLENIEEKISRLEKEVKDDIKNLEENKKN

Sequences:

>Translated_193_residues
MKGLALPKIGARNLKTALAVTLCIGFFELIHRQYPFYACIAAVICMKDTVENSYKMGKSRMIGTITGGLVGLALTFIALN
FNLTRFSGIITGIGIVITIYLLNVFNRKGSVSIACIVLIAIMTNLHGKAPYAYAVDRIIDTFIGIIIALLINNYIYKYEN
KVKKDLENIEEKISRLEKEVKDDIKNLEENKKN
>Mature_193_residues
MKGLALPKIGARNLKTALAVTLCIGFFELIHRQYPFYACIAAVICMKDTVENSYKMGKSRMIGTITGGLVGLALTFIALN
FNLTRFSGIITGIGIVITIYLLNVFNRKGSVSIACIVLIAIMTNLHGKAPYAYAVDRIIDTFIGIIIALLINNYIYKYEN
KVKKDLENIEEKISRLEKEVKDDIKNLEENKKN

Specific function: Unknown

COG id: COG4129

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21541; Mature: 21541

Theoretical pI: Translated: 9.75; Mature: 9.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKGLALPKIGARNLKTALAVTLCIGFFELIHRQYPFYACIAAVICMKDTVENSYKMGKSR
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
MIGTITGGLVGLALTFIALNFNLTRFSGIITGIGIVITIYLLNVFNRKGSVSIACIVLIA
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
IMTNLHGKAPYAYAVDRIIDTFIGIIIALLINNYIYKYENKVKKDLENIEEKISRLEKEV
HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KDDIKNLEENKKN
HHHHHHHHHCCCC
>Mature Secondary Structure
MKGLALPKIGARNLKTALAVTLCIGFFELIHRQYPFYACIAAVICMKDTVENSYKMGKSR
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
MIGTITGGLVGLALTFIALNFNLTRFSGIITGIGIVITIYLLNVFNRKGSVSIACIVLIA
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
IMTNLHGKAPYAYAVDRIIDTFIGIIIALLINNYIYKYENKVKKDLENIEEKISRLEKEV
HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KDDIKNLEENKKN
HHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA