| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is 18311507
Identifier: 18311507
GI number: 18311507
Start: 2892007
End: 2892588
Strand: Direct
Name: 18311507
Synonym: CPE2525
Alternate gene names: NA
Gene position: 2892007-2892588 (Clockwise)
Preceding gene: 18311504
Following gene: 18311508
Centisome position: 95.4
GC content: 28.18
Gene sequence:
>582_bases ATGAAAGGTTTAGCCCTACCTAAAATAGGTGCAAGAAACTTAAAGACAGCTTTGGCTGTAACTTTATGCATAGGATTCTT TGAGCTAATACACAGACAATATCCTTTTTATGCTTGTATAGCAGCTGTAATCTGTATGAAAGATACTGTTGAAAACTCAT ATAAAATGGGAAAAAGCAGAATGATTGGTACAATAACCGGTGGACTTGTTGGCTTAGCTTTAACTTTTATAGCTTTAAAC TTTAACCTTACAAGATTCTCAGGAATAATAACAGGGATTGGAATAGTTATAACCATTTATCTGCTTAATGTTTTTAACAG AAAAGGATCTGTTTCTATAGCATGTATAGTATTAATAGCAATTATGACAAACTTACATGGTAAGGCTCCATATGCTTATG CAGTTGATAGAATTATAGATACTTTTATAGGTATAATAATTGCTCTATTAATAAATAACTACATATATAAATATGAAAAT AAGGTAAAAAAAGATTTAGAAAATATAGAAGAAAAAATCTCTAGACTTGAAAAAGAAGTTAAAGATGATATAAAAAATCT AGAAGAAAATAAAAAGAACTAA
Upstream 100 bases:
>100_bases GAATTCTTTAAAATTCTTGTTAAGTCATAATTTGTATTAATATAAAAATGTTATATACTATCTATAATAATATATAAATT GTCGGGGAGGTATTATTTAA
Downstream 100 bases:
>100_bases TATGATTTAGGAGGGAAATATTTGTTTAAATTTAACCTGCAAACTATAGGTGCTAGAAACCTTAAAACTTCTCTTTCAGT ATTTATATGCATTATAGTAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 193; Mature: 193
Protein sequence:
>193_residues MKGLALPKIGARNLKTALAVTLCIGFFELIHRQYPFYACIAAVICMKDTVENSYKMGKSRMIGTITGGLVGLALTFIALN FNLTRFSGIITGIGIVITIYLLNVFNRKGSVSIACIVLIAIMTNLHGKAPYAYAVDRIIDTFIGIIIALLINNYIYKYEN KVKKDLENIEEKISRLEKEVKDDIKNLEENKKN
Sequences:
>Translated_193_residues MKGLALPKIGARNLKTALAVTLCIGFFELIHRQYPFYACIAAVICMKDTVENSYKMGKSRMIGTITGGLVGLALTFIALN FNLTRFSGIITGIGIVITIYLLNVFNRKGSVSIACIVLIAIMTNLHGKAPYAYAVDRIIDTFIGIIIALLINNYIYKYEN KVKKDLENIEEKISRLEKEVKDDIKNLEENKKN >Mature_193_residues MKGLALPKIGARNLKTALAVTLCIGFFELIHRQYPFYACIAAVICMKDTVENSYKMGKSRMIGTITGGLVGLALTFIALN FNLTRFSGIITGIGIVITIYLLNVFNRKGSVSIACIVLIAIMTNLHGKAPYAYAVDRIIDTFIGIIIALLINNYIYKYEN KVKKDLENIEEKISRLEKEVKDDIKNLEENKKN
Specific function: Unknown
COG id: COG4129
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21541; Mature: 21541
Theoretical pI: Translated: 9.75; Mature: 9.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKGLALPKIGARNLKTALAVTLCIGFFELIHRQYPFYACIAAVICMKDTVENSYKMGKSR CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH MIGTITGGLVGLALTFIALNFNLTRFSGIITGIGIVITIYLLNVFNRKGSVSIACIVLIA HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH IMTNLHGKAPYAYAVDRIIDTFIGIIIALLINNYIYKYENKVKKDLENIEEKISRLEKEV HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KDDIKNLEENKKN HHHHHHHHHCCCC >Mature Secondary Structure MKGLALPKIGARNLKTALAVTLCIGFFELIHRQYPFYACIAAVICMKDTVENSYKMGKSR CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH MIGTITGGLVGLALTFIALNFNLTRFSGIITGIGIVITIYLLNVFNRKGSVSIACIVLIA HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH IMTNLHGKAPYAYAVDRIIDTFIGIIIALLINNYIYKYENKVKKDLENIEEKISRLEKEV HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KDDIKNLEENKKN HHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA