Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is 18311503

Identifier: 18311503

GI number: 18311503

Start: 2885391

End: 2886890

Strand: Reverse

Name: 18311503

Synonym: CPE2521

Alternate gene names: NA

Gene position: 2886890-2885391 (Counterclockwise)

Preceding gene: 18311505

Following gene: 18311502

Centisome position: 95.23

GC content: 24.73

Gene sequence:

>1500_bases
ATGAAAATTTATATTATAGGAGCCTTAATTGGAGCAGTAATAGGCTACATAACAAACTGGCTTGCTATAAAAATGTTATT
TAGGCCAAGAGAAGCAAAGTATATTTTTGGCATGAAACTTCCTTTTACACCAGGATTAATACCTAAGGAAAAAAGTAGAA
TAGCTAATAAGGTTGGAGAAACTGTAGGAACTCATTTACTAAATTCAGATAGCTTAAGTAAGGCTTTAAAGGATGATAAA
ATAAAATCAAAATTTAATGAAGTTGCTAAAGAAAAAATTAATCAAGTTATTAATAGCAATTCAACTTTAGAGGAATCATT
AAAAAATACTTTAGGGGAAAATTACTATGCTCTAAAGGGAAATATGATAAACAATATAGCTAAGACTATTTTAGAATCAA
TTCAGGAAGAGGAGTTTAAAAATAAGCTTAAATTTTATATAGTAGATTCTATTAAAGAAAGACTAAATAAAAATCCTAAA
AAGATAATTGATTTTATAAATAGCAATAAATTTAGAGAAGTAATAATAAATACTTTAGAGGAAGAAAAAACAAGAGACAT
AATAGGAAAAGCTCTTTTAAAAGAAGTAAAAACTTTAGAAAAAGAAGATTTAACTATTGAAGAAGTCATTCCAGAAAATA
TTAAACCTTACATAGAAGAATATGTAAAATCTCAAAAAGATACTCTTGTGGATATAATAAAAAATCTTCTTAGAGATGAT
GAGGTTTCATATAAGATAAAAAGTGCAATAAATGATAATATACCATCTATAGTATCAATGTTTCTAAGTGGAGATGTAAT
ATACGGAAAGTTAGTTTCATTAGTTGATAAGTCTTTAAGTGAAGAAGAAAATAAAGAGTATATATGTGATGCGGCTTTAG
CTTTTGTACATGAAAGTATGAAGAAAAAAGTAAGTGATGTAATAAATAATGTTGGAGAAGAAAAGCTAGAGGTAATATCA
GATGCTCTAGGAGATAAGATTTCAAAAAAATTAAATACAGAAGAAAATATAGATTCTATAATAAGTAAACTAAATTGTAA
AATTTCTTCTTTTAATAGTTATGAAGAAATTATAAAAGTGTTATTCAATGACTATGAAAATATTCTAATTGATAATATAG
ATTCAATGATTTCTCAAATTGTTAATAATAACCAATTATCTGGTGAAATAAGTAAAATAATTGAAAAGGTATTTGATAAA
TTTTTACAAAATTCCTTAAATGATATATGTTATAATAAACAAAACTTAGAAAATAGTATTATGAGTATTTTAGATAATTT
ATATAATGATTTTGTGGAAAATAAATCAGCTAAAGTACTAGAAATTGTGGATATTTCTTCAATAGTAGAAGAACAGATAA
ATGCTTTCGAAGTGGATTATGCAGAGGAAATCATAATTGGAATAGCTAATAAAGAACTTAAGGCAATAACTTGGTTAGGA
GCTTTATTAGGAGGAATTCTAGGAATTTTATCACCACTTTTATCTACAATTTATATGTAA

Upstream 100 bases:

>100_bases
TTATTCACCACCCTTAAAAAATAAGTAGTATTATATTAATATAAATATATAATATTTTACACTATTTAAGTGAATTTTAA
ATTGATAGGAGTGAAAATAG

Downstream 100 bases:

>100_bases
AATTCAAAGGAGAAAATTATGAAATATAAAATATTTGATACACATGCACATTATGACTCAGATAGTTTTGATGAAGATAG
AGAAAATGTAATAAAAGAAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 499; Mature: 499

Protein sequence:

>499_residues
MKIYIIGALIGAVIGYITNWLAIKMLFRPREAKYIFGMKLPFTPGLIPKEKSRIANKVGETVGTHLLNSDSLSKALKDDK
IKSKFNEVAKEKINQVINSNSTLEESLKNTLGENYYALKGNMINNIAKTILESIQEEEFKNKLKFYIVDSIKERLNKNPK
KIIDFINSNKFREVIINTLEEEKTRDIIGKALLKEVKTLEKEDLTIEEVIPENIKPYIEEYVKSQKDTLVDIIKNLLRDD
EVSYKIKSAINDNIPSIVSMFLSGDVIYGKLVSLVDKSLSEEENKEYICDAALAFVHESMKKKVSDVINNVGEEKLEVIS
DALGDKISKKLNTEENIDSIISKLNCKISSFNSYEEIIKVLFNDYENILIDNIDSMISQIVNNNQLSGEISKIIEKVFDK
FLQNSLNDICYNKQNLENSIMSILDNLYNDFVENKSAKVLEIVDISSIVEEQINAFEVDYAEEIIIGIANKELKAITWLG
ALLGGILGILSPLLSTIYM

Sequences:

>Translated_499_residues
MKIYIIGALIGAVIGYITNWLAIKMLFRPREAKYIFGMKLPFTPGLIPKEKSRIANKVGETVGTHLLNSDSLSKALKDDK
IKSKFNEVAKEKINQVINSNSTLEESLKNTLGENYYALKGNMINNIAKTILESIQEEEFKNKLKFYIVDSIKERLNKNPK
KIIDFINSNKFREVIINTLEEEKTRDIIGKALLKEVKTLEKEDLTIEEVIPENIKPYIEEYVKSQKDTLVDIIKNLLRDD
EVSYKIKSAINDNIPSIVSMFLSGDVIYGKLVSLVDKSLSEEENKEYICDAALAFVHESMKKKVSDVINNVGEEKLEVIS
DALGDKISKKLNTEENIDSIISKLNCKISSFNSYEEIIKVLFNDYENILIDNIDSMISQIVNNNQLSGEISKIIEKVFDK
FLQNSLNDICYNKQNLENSIMSILDNLYNDFVENKSAKVLEIVDISSIVEEQINAFEVDYAEEIIIGIANKELKAITWLG
ALLGGILGILSPLLSTIYM
>Mature_499_residues
MKIYIIGALIGAVIGYITNWLAIKMLFRPREAKYIFGMKLPFTPGLIPKEKSRIANKVGETVGTHLLNSDSLSKALKDDK
IKSKFNEVAKEKINQVINSNSTLEESLKNTLGENYYALKGNMINNIAKTILESIQEEEFKNKLKFYIVDSIKERLNKNPK
KIIDFINSNKFREVIINTLEEEKTRDIIGKALLKEVKTLEKEDLTIEEVIPENIKPYIEEYVKSQKDTLVDIIKNLLRDD
EVSYKIKSAINDNIPSIVSMFLSGDVIYGKLVSLVDKSLSEEENKEYICDAALAFVHESMKKKVSDVINNVGEEKLEVIS
DALGDKISKKLNTEENIDSIISKLNCKISSFNSYEEIIKVLFNDYENILIDNIDSMISQIVNNNQLSGEISKIIEKVFDK
FLQNSLNDICYNKQNLENSIMSILDNLYNDFVENKSAKVLEIVDISSIVEEQINAFEVDYAEEIIIGIANKELKAITWLG
ALLGGILGILSPLLSTIYM

Specific function: Unknown

COG id: COG4399

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0754 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007383
- InterPro:   IPR016991 [H]

Pfam domain/function: PF04286 DUF445 [H]

EC number: NA

Molecular weight: Translated: 56570; Mature: 56570

Theoretical pI: Translated: 4.78; Mature: 4.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIYIIGALIGAVIGYITNWLAIKMLFRPREAKYIFGMKLPFTPGLIPKEKSRIANKVGE
CEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHH
TVGTHLLNSDSLSKALKDDKIKSKFNEVAKEKINQVINSNSTLEESLKNTLGENYYALKG
HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCEEEECC
NMINNIAKTILESIQEEEFKNKLKFYIVDSIKERLNKNPKKIIDFINSNKFREVIINTLE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHH
EEKTRDIIGKALLKEVKTLEKEDLTIEEVIPENIKPYIEEYVKSQKDTLVDIIKNLLRDD
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
EVSYKIKSAINDNIPSIVSMFLSGDVIYGKLVSLVDKSLSEEENKEYICDAALAFVHESM
HHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
KKKVSDVINNVGEEKLEVISDALGDKISKKLNTEENIDSIISKLNCKISSFNSYEEIIKV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHCCCCHHHHHHH
LFNDYENILIDNIDSMISQIVNNNQLSGEISKIIEKVFDKFLQNSLNDICYNKQNLENSI
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
MSILDNLYNDFVENKSAKVLEIVDISSIVEEQINAFEVDYAEEIIIGIANKELKAITWLG
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
ALLGGILGILSPLLSTIYM
HHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKIYIIGALIGAVIGYITNWLAIKMLFRPREAKYIFGMKLPFTPGLIPKEKSRIANKVGE
CEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHH
TVGTHLLNSDSLSKALKDDKIKSKFNEVAKEKINQVINSNSTLEESLKNTLGENYYALKG
HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCEEEECC
NMINNIAKTILESIQEEEFKNKLKFYIVDSIKERLNKNPKKIIDFINSNKFREVIINTLE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHH
EEKTRDIIGKALLKEVKTLEKEDLTIEEVIPENIKPYIEEYVKSQKDTLVDIIKNLLRDD
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
EVSYKIKSAINDNIPSIVSMFLSGDVIYGKLVSLVDKSLSEEENKEYICDAALAFVHESM
HHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
KKKVSDVINNVGEEKLEVISDALGDKISKKLNTEENIDSIISKLNCKISSFNSYEEIIKV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHCCCCHHHHHHH
LFNDYENILIDNIDSMISQIVNNNQLSGEISKIIEKVFDKFLQNSLNDICYNKQNLENSI
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
MSILDNLYNDFVENKSAKVLEIVDISSIVEEQINAFEVDYAEEIIIGIANKELKAITWLG
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
ALLGGILGILSPLLSTIYM
HHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA