| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is 18311492
Identifier: 18311492
GI number: 18311492
Start: 2875934
End: 2876374
Strand: Direct
Name: 18311492
Synonym: CPE2510
Alternate gene names: NA
Gene position: 2875934-2876374 (Clockwise)
Preceding gene: 18311491
Following gene: 18311504
Centisome position: 94.87
GC content: 29.93
Gene sequence:
>441_bases ATGTATAATGATGAATTTATAAAAGCTGAAGAAAAACGCCTTTATGATGAATACAAAAAACAGGTAGCCAATTTAAAAAA AGTACAAAAAGAAAAAGATGCTGTAGGACAAGTCTTCACTAAGGGCCTTCTTCCTATATACGCATTATATATTCTTAGTA TTCAACCTACTAACGGAAACGATTTAGCTCAGAAAATTGGTGAACAAACTAATGGGCTTTGGTTTCCTAGCACAGGTGGA ATATATCCCTTACTAAAGAAATTAGAAAAACAAGGCTTTGTAACTGGCTCTTGGGATGATCCTAAAAGAAAAATACAAAA AGTATATTCTTTAACGCCAGAAGGTTTTAAAGAGTTTGAAGAAAAAAAACATTTATTAAAGCCTAAAATAAAAGAAGCCT TAGAAGTCTTTAAAATAATATATTCACATCTTTATAACTAA
Upstream 100 bases:
>100_bases CTAACTTATTAAAATCTCAAGTAAGAGCTATAGGAGCTGCTATGGGTGTTCACGCTGGCCCTGGTATGGTGGGTGTTTCA ATTCAAAAGGAAATTTAGCT
Downstream 100 bases:
>100_bases AGAAGATTCTAAAAGATTATATAATCTTTTAGAATCTTTTAATTTTAATTATTATTCAACTGAAATAGCTGCTACTGGAC AACTACCCTCAGCTTCTTTT
Product: PadR family transcriptional regulator
Products: NA
Alternate protein names: PadR Family Transcriptional Regulator; Transcriptional Regulator PadR Family; Transcriptional Regulator PadR-Like Family
Number of amino acids: Translated: 146; Mature: 146
Protein sequence:
>146_residues MYNDEFIKAEEKRLYDEYKKQVANLKKVQKEKDAVGQVFTKGLLPIYALYILSIQPTNGNDLAQKIGEQTNGLWFPSTGG IYPLLKKLEKQGFVTGSWDDPKRKIQKVYSLTPEGFKEFEEKKHLLKPKIKEALEVFKIIYSHLYN
Sequences:
>Translated_146_residues MYNDEFIKAEEKRLYDEYKKQVANLKKVQKEKDAVGQVFTKGLLPIYALYILSIQPTNGNDLAQKIGEQTNGLWFPSTGG IYPLLKKLEKQGFVTGSWDDPKRKIQKVYSLTPEGFKEFEEKKHLLKPKIKEALEVFKIIYSHLYN >Mature_146_residues MYNDEFIKAEEKRLYDEYKKQVANLKKVQKEKDAVGQVFTKGLLPIYALYILSIQPTNGNDLAQKIGEQTNGLWFPSTGG IYPLLKKLEKQGFVTGSWDDPKRKIQKVYSLTPEGFKEFEEKKHLLKPKIKEALEVFKIIYSHLYN
Specific function: Unknown
COG id: COG1695
COG function: function code K; Predicted transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16989; Mature: 16989
Theoretical pI: Translated: 9.80; Mature: 9.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYNDEFIKAEEKRLYDEYKKQVANLKKVQKEKDAVGQVFTKGLLPIYALYILSIQPTNGN CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH DLAQKIGEQTNGLWFPSTGGIYPLLKKLEKQGFVTGSWDDPKRKIQKVYSLTPEGFKEFE HHHHHHHHHHCCEECCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCHHHHHHHH EKKHLLKPKIKEALEVFKIIYSHLYN HHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MYNDEFIKAEEKRLYDEYKKQVANLKKVQKEKDAVGQVFTKGLLPIYALYILSIQPTNGN CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH DLAQKIGEQTNGLWFPSTGGIYPLLKKLEKQGFVTGSWDDPKRKIQKVYSLTPEGFKEFE HHHHHHHHHHCCEECCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCHHHHHHHH EKKHLLKPKIKEALEVFKIIYSHLYN HHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA