Click here to switch to the map view.

The map label for this gene is 18311491

Identifier: 18311491

GI number: 18311491

Start: 2875086

End: 2875931

Strand: Direct

Name: 18311491

Synonym: CPE2509

Alternate gene names: NA

Gene position: 2875086-2875931 (Clockwise)

Preceding gene: 18311490

Following gene: 18311492

Centisome position: 94.84

GC content: 30.73

Gene sequence:

>846_bases
ATGCAAAAAATTGCTATAATAACAGACAGCTCTTGTGACTTAACTATAGATGAAATAAAAGATTATAACTTAAATATATT
ACCTTTAAAGATAATATATAAAGACAGAGAATATAATGATATTTTTGATATAAAACCAATTGATGTTTACGAAAACTTAC
ACAATGAAGTGCCAACAACTTCTCTATGTAGTCCTGACTATATAAATTCAGTATTAGATAAATTAGAAGCTGAAGGATAT
ACTCACTTAATAGGTATATTTATATCTAGCTCATTATCAGGTACATTCAATGCTGCTAGATTAGTTATTGAAGAACGTAG
TTCTTTTAAATATTACTTATTCGATAGTAAAATAATAGGTTATCCTTTAGGTTCTATAGTTATAAAAGCAGCTGAATTTG
TTAAGGAAGGAAAAAGCTTTGAAGAAATAATTGAAGCTCTTTCAATTATAAGAGAAGCTACAACTGGATTTTATACTCTT
AATACCTTAGAATATTTAAGACGTGGTGGAAGAATAGGTAAGGTTGCAGGAACAGTTGGAGATTTACTTCATCTTAAACC
AATAATATCAGTTGATGAACATGGTGCTTATACAACAATTGCTAAGGCAAGAGGAAGAAAACAATCTTTGAAAAAACTTG
CTAGCATAATTTTAGAGCATCTTGATGAAGGTAAATGCAATGTAGCTATCCTTAATGGTATGGCGGAAGAGGAAGCTAAT
CAAGTTCTTGATTCAATAAGTTCTCATCCTAACTTATTAAAATCTCAAGTAAGAGCTATAGGAGCTGCTATGGGTGTTCA
CGCTGGCCCTGGTATGGTGGGTGTTTCAATTCAAAAGGAAATTTAG

Upstream 100 bases:

>100_bases
TCTATAAATGTTGAATTATTCGGTTTGCTATTTAATTCACTAAATATAATATAAATTATTATTTTATTTAGTAAGTATAA
AATGATTGGGGGCATATAAA

Downstream 100 bases:

>100_bases
CTATGTATAATGATGAATTTATAAAAGCTGAAGAAAAACGCCTTTATGATGAATACAAAAAACAGGTAGCCAATTTAAAA
AAAGTACAAAAAGAAAAAGA

Product: degV family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 281; Mature: 281

Protein sequence:

>281_residues
MQKIAIITDSSCDLTIDEIKDYNLNILPLKIIYKDREYNDIFDIKPIDVYENLHNEVPTTSLCSPDYINSVLDKLEAEGY
THLIGIFISSSLSGTFNAARLVIEERSSFKYYLFDSKIIGYPLGSIVIKAAEFVKEGKSFEEIIEALSIIREATTGFYTL
NTLEYLRRGGRIGKVAGTVGDLLHLKPIISVDEHGAYTTIAKARGRKQSLKKLASIILEHLDEGKCNVAILNGMAEEEAN
QVLDSISSHPNLLKSQVRAIGAAMGVHAGPGMVGVSIQKEI

Sequences:

>Translated_281_residues
MQKIAIITDSSCDLTIDEIKDYNLNILPLKIIYKDREYNDIFDIKPIDVYENLHNEVPTTSLCSPDYINSVLDKLEAEGY
THLIGIFISSSLSGTFNAARLVIEERSSFKYYLFDSKIIGYPLGSIVIKAAEFVKEGKSFEEIIEALSIIREATTGFYTL
NTLEYLRRGGRIGKVAGTVGDLLHLKPIISVDEHGAYTTIAKARGRKQSLKKLASIILEHLDEGKCNVAILNGMAEEEAN
QVLDSISSHPNLLKSQVRAIGAAMGVHAGPGMVGVSIQKEI
>Mature_281_residues
MQKIAIITDSSCDLTIDEIKDYNLNILPLKIIYKDREYNDIFDIKPIDVYENLHNEVPTTSLCSPDYINSVLDKLEAEGY
THLIGIFISSSLSGTFNAARLVIEERSSFKYYLFDSKIIGYPLGSIVIKAAEFVKEGKSFEEIIEALSIIREATTGFYTL
NTLEYLRRGGRIGKVAGTVGDLLHLKPIISVDEHGAYTTIAKARGRKQSLKKLASIILEHLDEGKCNVAILNGMAEEEAN
QVLDSISSHPNLLKSQVRAIGAAMGVHAGPGMVGVSIQKEI

Specific function: Unknown

COG id: COG1307

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 DegV domain

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y2509_CLOPE (Q8XHH5)

Other databases:

- EMBL:   BA000016
- RefSeq:   NP_563425.1
- ProteinModelPortal:   Q8XHH5
- SMR:   Q8XHH5
- GeneID:   990887
- GenomeReviews:   BA000016_GR
- KEGG:   cpe:CPE2509
- NMPDR:   fig|195102.1.peg.2572
- HOGENOM:   HBG729520
- OMA:   SINEEGK
- ProtClustDB:   CLSK567178
- BioCyc:   CPER195102:CPE2509-MONOMER
- InterPro:   IPR003797
- TIGRFAMs:   TIGR00762

Pfam domain/function: PF02645 DegV

EC number: NA

Molecular weight: Translated: 30980; Mature: 30980

Theoretical pI: Translated: 5.65; Mature: 5.65

Prosite motif: PS51482 DEGV

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKIAIITDSSCDLTIDEIKDYNLNILPLKIIYKDREYNDIFDIKPIDVYENLHNEVPTT
CCEEEEEECCCCCEEHHHHCCCCCEEEEEEEEEECCCCCCCCCCCCHHHHHHHHHCCCCC
SLCSPDYINSVLDKLEAEGYTHLIGIFISSSLSGTFNAARLVIEERSSFKYYLFDSKIIG
CCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHEEECCCCEEEEEECCCCCC
YPLGSIVIKAAEFVKEGKSFEEIIEALSIIREATTGFYTLNTLEYLRRGGRIGKVAGTVG
CCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCEEEHHHHHHHHCCCCCCHHHHHHH
DLLHLKPIISVDEHGAYTTIAKARGRKQSLKKLASIILEHLDEGKCNVAILNGMAEEEAN
HHHHHHHHEEECCCCCCHHHHHHCCHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHH
QVLDSISSHPNLLKSQVRAIGAAMGVHAGPGMVGVSIQKEI
HHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCC
>Mature Secondary Structure
MQKIAIITDSSCDLTIDEIKDYNLNILPLKIIYKDREYNDIFDIKPIDVYENLHNEVPTT
CCEEEEEECCCCCEEHHHHCCCCCEEEEEEEEEECCCCCCCCCCCCHHHHHHHHHCCCCC
SLCSPDYINSVLDKLEAEGYTHLIGIFISSSLSGTFNAARLVIEERSSFKYYLFDSKIIG
CCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHEEECCCCEEEEEECCCCCC
YPLGSIVIKAAEFVKEGKSFEEIIEALSIIREATTGFYTLNTLEYLRRGGRIGKVAGTVG
CCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCEEEHHHHHHHHCCCCCCHHHHHHH
DLLHLKPIISVDEHGAYTTIAKARGRKQSLKKLASIILEHLDEGKCNVAILNGMAEEEAN
HHHHHHHHEEECCCCCCHHHHHHCCHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHH
QVLDSISSHPNLLKSQVRAIGAAMGVHAGPGMVGVSIQKEI
HHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11792842