Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is 18311481

Identifier: 18311481

GI number: 18311481

Start: 2861299

End: 2862513

Strand: Reverse

Name: 18311481

Synonym: CPE2499

Alternate gene names: NA

Gene position: 2862513-2861299 (Counterclockwise)

Preceding gene: 18311483

Following gene: 18311479

Centisome position: 94.43

GC content: 28.4

Gene sequence:

>1215_bases
ATGTGCAATTTTTTTGAAGAAAAGTTTGAACAAATAAATAAATTGAAACATTTAATGACTTTATCTAAAGGAAATAATCA
AGCTAAAACATATAAAGAACAAATAGAAGATATTTTTAAAGAATTTCAAAGGGATTATATAAGGGAAGAAAGTAATACTA
TGCTTATTCTGACAAAGGAGGAATTAGCAAATTTTAATGGGGAAAATGGAAATTCAGCCTATATTTCTATAGATGGTATT
ATATATGATATTTCAAATATAGAATTGTTTAAACAAAGTCCTTATAACAGTTTAAAACTTGGAAGTGATGTAACAGAGGC
CTTTGATAAATTAAATAATGGAGATGAATCTATATTAAGAGATATTCCTATGGTAGGGCTTTTAGCAGAGCCTGAGGAAG
CTGAAATTATGGATGAAGTAGAAGAGTATTATCCACAACAAAGGCTAAAAATAATGAGTTCAGAAGAACTTAAAAAATAT
AATGGAGAGAATGGAAGTTTAGCATATGTAGCTATTGAAGGAATAGTTTATGATATAAGTAATTTATCAGTTTTAGAGCT
ATTTAATGGGACAAACTTAAGATTAGGCTCTGATATTACTGAAGAATTTAAAACTTATTACAGAGGGGATAAAGAGCTTT
TAAAGGGTGCTAAAGAAGTAGCAATATTACATGATTTCAATGAAAGTCAAAGGGGAAAACATATTGAACGCAATCTTAAG
GAGTTAACTTTAAAGGAATTATCAAAATATAATGGAGAAAATGGAAATCCTGCTTATATAGCAGTTAATGGAATAATATA
CGATGTTACAAATGAAGCTGTTTTTAAAAAGAGTCCACATAATTCAGTGAAATTAGGCACTGATATTACCAAATACTTTA
AAGGATGTCACAATGCAGATGAAGGCGTATTAGCTAAGCTTCCTATAGTTGGAACAGTTATATGTAAAAAAGAGCCCTTG
ATTAAGGATACGGGTTCTAAGGAATTTAATATAAATGAACTTAGTAATTATAATGGAAAGAATGGAAAGCCTCCTTATAT
AGCTATATTTGGTACAGTATATGATTTAACTGACGTAGATAAATGGCAAGAAAAAAACATAAAAGTAGGATGTGATTTAA
CAGGAGAATATAAAGAGGTTTATGGGAATGATAAATCTCATTTAAAAAATTTAAAAGTTGCAGGGGTTTTAACTTGTAGT
TTAAATGATTATTAA

Upstream 100 bases:

>100_bases
TATTTAGTTCGATTAATAATGATTTTACAATAAAACATTAACATTTGCAATATTAACCACATAGAAATATATAGATATAG
TGTGTAATATAGGAGTTTTT

Downstream 100 bases:

>100_bases
AAAAATAAAAGCTAGATTCACTTATGAACTACTTATTATAAAATTTAAAGAGAGAATTCTATAAAGTTTTTACACAAAAA
AATTAAAATTCTCATCTATT

Product: heme/steroid binding domain protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 404; Mature: 404

Protein sequence:

>404_residues
MCNFFEEKFEQINKLKHLMTLSKGNNQAKTYKEQIEDIFKEFQRDYIREESNTMLILTKEELANFNGENGNSAYISIDGI
IYDISNIELFKQSPYNSLKLGSDVTEAFDKLNNGDESILRDIPMVGLLAEPEEAEIMDEVEEYYPQQRLKIMSSEELKKY
NGENGSLAYVAIEGIVYDISNLSVLELFNGTNLRLGSDITEEFKTYYRGDKELLKGAKEVAILHDFNESQRGKHIERNLK
ELTLKELSKYNGENGNPAYIAVNGIIYDVTNEAVFKKSPHNSVKLGTDITKYFKGCHNADEGVLAKLPIVGTVICKKEPL
IKDTGSKEFNINELSNYNGKNGKPPYIAIFGTVYDLTDVDKWQEKNIKVGCDLTGEYKEVYGNDKSHLKNLKVAGVLTCS
LNDY

Sequences:

>Translated_404_residues
MCNFFEEKFEQINKLKHLMTLSKGNNQAKTYKEQIEDIFKEFQRDYIREESNTMLILTKEELANFNGENGNSAYISIDGI
IYDISNIELFKQSPYNSLKLGSDVTEAFDKLNNGDESILRDIPMVGLLAEPEEAEIMDEVEEYYPQQRLKIMSSEELKKY
NGENGSLAYVAIEGIVYDISNLSVLELFNGTNLRLGSDITEEFKTYYRGDKELLKGAKEVAILHDFNESQRGKHIERNLK
ELTLKELSKYNGENGNPAYIAVNGIIYDVTNEAVFKKSPHNSVKLGTDITKYFKGCHNADEGVLAKLPIVGTVICKKEPL
IKDTGSKEFNINELSNYNGKNGKPPYIAIFGTVYDLTDVDKWQEKNIKVGCDLTGEYKEVYGNDKSHLKNLKVAGVLTCS
LNDY
>Mature_404_residues
MCNFFEEKFEQINKLKHLMTLSKGNNQAKTYKEQIEDIFKEFQRDYIREESNTMLILTKEELANFNGENGNSAYISIDGI
IYDISNIELFKQSPYNSLKLGSDVTEAFDKLNNGDESILRDIPMVGLLAEPEEAEIMDEVEEYYPQQRLKIMSSEELKKY
NGENGSLAYVAIEGIVYDISNLSVLELFNGTNLRLGSDITEEFKTYYRGDKELLKGAKEVAILHDFNESQRGKHIERNLK
ELTLKELSKYNGENGNPAYIAVNGIIYDVTNEAVFKKSPHNSVKLGTDITKYFKGCHNADEGVLAKLPIVGTVICKKEPL
IKDTGSKEFNINELSNYNGKNGKPPYIAIFGTVYDLTDVDKWQEKNIKVGCDLTGEYKEVYGNDKSHLKNLKVAGVLTCS
LNDY

Specific function: Unknown

COG id: COG4892

COG function: function code R; Predicted heme/steroid binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45823; Mature: 45823

Theoretical pI: Translated: 4.73; Mature: 4.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCNFFEEKFEQINKLKHLMTLSKGNNQAKTYKEQIEDIFKEFQRDYIREESNTMLILTKE
CCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHH
ELANFNGENGNSAYISIDGIIYDISNIELFKQSPYNSLKLGSDVTEAFDKLNNGDESILR
HHHCCCCCCCCEEEEEEEEEEEECCCEEEEECCCCCCCCCCCHHHHHHHHCCCCHHHHHH
DIPMVGLLAEPEEAEIMDEVEEYYPQQRLKIMSSEELKKYNGENGSLAYVAIEGIVYDIS
HCCCEEEECCCHHHHHHHHHHHHCCHHHHHHHCHHHHHHHCCCCCCEEEEEEEEEEEECC
NLSVLELFNGTNLRLGSDITEEFKTYYRGDKELLKGAKEVAILHDFNESQRGKHIERNLK
CCEEEEEECCCCEEECCHHHHHHHHHHCCCHHHHCCHHHEEEEECCCCCCCCHHHHHHHH
ELTLKELSKYNGENGNPAYIAVNGIIYDVTNEAVFKKSPHNSVKLGTDITKYFKGCHNAD
HHHHHHHHHHCCCCCCEEEEEEEEEEEECCCCHHCCCCCCCCEEECHHHHHHHHHCCCCC
EGVLAKLPIVGTVICKKEPLIKDTGSKEFNINELSNYNGKNGKPPYIAIFGTVYDLTDVD
CCCEEECCCEEEEEECCCCCCCCCCCCCCCHHHHCCCCCCCCCCCEEEEEEEECCCCCCC
KWQEKNIKVGCDLTGEYKEVYGNDKSHLKNLKVAGVLTCSLNDY
HHHHCCEEEECCCCCCHHHHCCCCHHHHHCEEEEEEEEEECCCC
>Mature Secondary Structure
MCNFFEEKFEQINKLKHLMTLSKGNNQAKTYKEQIEDIFKEFQRDYIREESNTMLILTKE
CCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHH
ELANFNGENGNSAYISIDGIIYDISNIELFKQSPYNSLKLGSDVTEAFDKLNNGDESILR
HHHCCCCCCCCEEEEEEEEEEEECCCEEEEECCCCCCCCCCCHHHHHHHHCCCCHHHHHH
DIPMVGLLAEPEEAEIMDEVEEYYPQQRLKIMSSEELKKYNGENGSLAYVAIEGIVYDIS
HCCCEEEECCCHHHHHHHHHHHHCCHHHHHHHCHHHHHHHCCCCCCEEEEEEEEEEEECC
NLSVLELFNGTNLRLGSDITEEFKTYYRGDKELLKGAKEVAILHDFNESQRGKHIERNLK
CCEEEEEECCCCEEECCHHHHHHHHHHCCCHHHHCCHHHEEEEECCCCCCCCHHHHHHHH
ELTLKELSKYNGENGNPAYIAVNGIIYDVTNEAVFKKSPHNSVKLGTDITKYFKGCHNAD
HHHHHHHHHHCCCCCCEEEEEEEEEEEECCCCHHCCCCCCCCEEECHHHHHHHHHCCCCC
EGVLAKLPIVGTVICKKEPLIKDTGSKEFNINELSNYNGKNGKPPYIAIFGTVYDLTDVD
CCCEEECCCEEEEEECCCCCCCCCCCCCCCHHHHCCCCCCCCCCCEEEEEEEECCCCCCC
KWQEKNIKVGCDLTGEYKEVYGNDKSHLKNLKVAGVLTCSLNDY
HHHHCCEEEECCCCCCHHHHCCCCHHHHHCEEEEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA