| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is prsA [H]
Identifier: 18311465
GI number: 18311465
Start: 2841241
End: 2842269
Strand: Reverse
Name: prsA [H]
Synonym: CPE2483
Alternate gene names: 18311465
Gene position: 2842269-2841241 (Counterclockwise)
Preceding gene: 18311466
Following gene: 18311464
Centisome position: 93.76
GC content: 30.13
Gene sequence:
>1029_bases ATGGTAAGTGTAAAAAAAATAGTCGCATCTGCACTAGTGGGAGTTTTAATGTTTAGTGCTGTTGGGTGTAATATGGTAGA AAAAACTCAAGCCGCTATTGATAAGACGACTGTAGCTACAGTTAACGGAGAGAAAATAACTTTAGGAGAGGTTGATTCAC ATTTAAAAGGAGTCTTTGCTCAAATGAAAAGCCAATATGGTGATAAATATATGGATGACCCTCAAGTTGCACAACAAATA TTACAACAAAGACAAAGTGTAGTACAGGGCTTAGTAACTGACAAAGTTTTAGGAATCGAAGCTGATAAATTAGGAATAAA ACCATCAGAAGAAGAGATTAAGAAAAAAGTAGATGAGCAATTTGAGAATATCAAAAAAGGAATGGGAGATAACTTTGATA AAGCTTTAGAGGCTGAAGGATATACAGAAGATACATTCAAAGATGTAATAAAAAATCAAGTTATAAATCAAGCCGTTCAA GATTATATTATTAAAGATGTAAAGGTAACTGATGAGGATGCACAAAAATACTATGATGAGAATAAACAACAGTTTGTAGC TAAGGATTCTGGAGTTCTTACAAAACACTTATTATTTGAAAATGAAGAAGAAGCTCAAAAAGCTTATGATGAAATTCAAT CAGGAAAAACAACATTCAATGATTTATTTACAAAATATCAAAATAATAAATCAGAGAATAAGAAACCTATAGCAGAAAAC TTAGGAGTAGTACCTGCAGAAAACTCAGGATTAGTTCAAGAGTTTGTAGATGGATTAAAACCATTAAAAGAAGGAGAAAT ATCTAAGCCTATAAAAACTCAATTTGGATATCATATAATTCAAGCTGGAGCTACTTATGAAAAAGGAGCACAGTTACCAT TTGATGAGGTTAAATCACAAATAATACAAATTTTAAAACAACAAAAAGATTCAGAGAAATTTAAAGCTGATATGGATCAA TGGAAAAAAGATTTAAATGTTAAAGTTTATGATGATAAATTACAAGAAGGTTTAAAAATAAGCAAATAG
Upstream 100 bases:
>100_bases TAATTTATAAATTGAAATATTACTGTAACATTGATATACTAAAATAGAATTTGACTAGAATATTATGTAAATTTTAATAG GAGAAAGGCGAGGTATTAGA
Downstream 100 bases:
>100_bases TTTTTATTAAGACTTATGGAAGTTATTCCATAAGTCTTTTTTTTAGAGTTTTTTAAGAGATATTTTCTTAAATTGGCTAT TAAATTTAAAGATGACATAA
Product: peptidylprolyl isomerase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 342; Mature: 342
Protein sequence:
>342_residues MVSVKKIVASALVGVLMFSAVGCNMVEKTQAAIDKTTVATVNGEKITLGEVDSHLKGVFAQMKSQYGDKYMDDPQVAQQI LQQRQSVVQGLVTDKVLGIEADKLGIKPSEEEIKKKVDEQFENIKKGMGDNFDKALEAEGYTEDTFKDVIKNQVINQAVQ DYIIKDVKVTDEDAQKYYDENKQQFVAKDSGVLTKHLLFENEEEAQKAYDEIQSGKTTFNDLFTKYQNNKSENKKPIAEN LGVVPAENSGLVQEFVDGLKPLKEGEISKPIKTQFGYHIIQAGATYEKGAQLPFDEVKSQIIQILKQQKDSEKFKADMDQ WKKDLNVKVYDDKLQEGLKISK
Sequences:
>Translated_342_residues MVSVKKIVASALVGVLMFSAVGCNMVEKTQAAIDKTTVATVNGEKITLGEVDSHLKGVFAQMKSQYGDKYMDDPQVAQQI LQQRQSVVQGLVTDKVLGIEADKLGIKPSEEEIKKKVDEQFENIKKGMGDNFDKALEAEGYTEDTFKDVIKNQVINQAVQ DYIIKDVKVTDEDAQKYYDENKQQFVAKDSGVLTKHLLFENEEEAQKAYDEIQSGKTTFNDLFTKYQNNKSENKKPIAEN LGVVPAENSGLVQEFVDGLKPLKEGEISKPIKTQFGYHIIQAGATYEKGAQLPFDEVKSQIIQILKQQKDSEKFKADMDQ WKKDLNVKVYDDKLQEGLKISK >Mature_342_residues MVSVKKIVASALVGVLMFSAVGCNMVEKTQAAIDKTTVATVNGEKITLGEVDSHLKGVFAQMKSQYGDKYMDDPQVAQQI LQQRQSVVQGLVTDKVLGIEADKLGIKPSEEEIKKKVDEQFENIKKGMGDNFDKALEAEGYTEDTFKDVIKNQVINQAVQ DYIIKDVKVTDEDAQKYYDENKQQFVAKDSGVLTKHLLFENEEEAQKAYDEIQSGKTTFNDLFTKYQNNKSENKKPIAEN LGVVPAENSGLVQEFVDGLKPLKEGEISKPIKTQFGYHIIQAGATYEKGAQLPFDEVKSQIIQILKQQKDSEKFKADMDQ WKKDLNVKVYDDKLQEGLKISK
Specific function: Plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins [H]
COG id: COG0760
COG function: function code O; Parvulin-like peptidyl-prolyl isomerase
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PpiC domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023059 - InterPro: IPR000297 - InterPro: IPR015391 - InterPro: IPR008880 [H]
Pfam domain/function: PF00639 Rotamase; PF09312 SurA_N [H]
EC number: =5.2.1.8 [H]
Molecular weight: Translated: 38422; Mature: 38422
Theoretical pI: Translated: 4.94; Mature: 4.94
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50198 PPIC_PPIASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVSVKKIVASALVGVLMFSAVGCNMVEKTQAAIDKTTVATVNGEKITLGEVDSHLKGVFA CCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHEEEECCCEEEHHHHHHHHHHHHH QMKSQYGDKYMDDPQVAQQILQQRQSVVQGLVTDKVLGIEADKLGIKPSEEEIKKKVDEQ HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHHH FENIKKGMGDNFDKALEAEGYTEDTFKDVIKNQVINQAVQDYIIKDVKVTDEDAQKYYDE HHHHHHHCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHC NKQQFVAKDSGVLTKHLLFENEEEAQKAYDEIQSGKTTFNDLFTKYQNNKSENKKPIAEN HHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCHHHH LGVVPAENSGLVQEFVDGLKPLKEGEISKPIKTQFGYHIIQAGATYEKGAQLPFDEVKSQ CCCCCCCCCCHHHHHHHHHCCHHCCCCCCCHHHHHCHHHHHCCCCHHCCCCCCHHHHHHH IIQILKQQKDSEKFKADMDQWKKDLNVKVYDDKLQEGLKISK HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHCCCCCCC >Mature Secondary Structure MVSVKKIVASALVGVLMFSAVGCNMVEKTQAAIDKTTVATVNGEKITLGEVDSHLKGVFA CCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHEEEECCCEEEHHHHHHHHHHHHH QMKSQYGDKYMDDPQVAQQILQQRQSVVQGLVTDKVLGIEADKLGIKPSEEEIKKKVDEQ HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHHH FENIKKGMGDNFDKALEAEGYTEDTFKDVIKNQVINQAVQDYIIKDVKVTDEDAQKYYDE HHHHHHHCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHC NKQQFVAKDSGVLTKHLLFENEEEAQKAYDEIQSGKTTFNDLFTKYQNNKSENKKPIAEN HHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCHHHH LGVVPAENSGLVQEFVDGLKPLKEGEISKPIKTQFGYHIIQAGATYEKGAQLPFDEVKSQ CCCCCCCCCCHHHHHHHHHCCHHCCCCCCCHHHHHCHHHHHCCCCHHCCCCCCHHHHHHH IIQILKQQKDSEKFKADMDQWKKDLNVKVYDDKLQEGLKISK HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA