| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is 18311457
Identifier: 18311457
GI number: 18311457
Start: 2835215
End: 2835607
Strand: Reverse
Name: 18311457
Synonym: CPE2475
Alternate gene names: NA
Gene position: 2835607-2835215 (Counterclockwise)
Preceding gene: 18311458
Following gene: 18311456
Centisome position: 93.54
GC content: 29.77
Gene sequence:
>393_bases TTGCTTGAATTAAGCTATAATAGTGTTTACAATAGACTTATATCGTACCGTTGCAAGTATGGGGGTATAAGAGTGAAAAA AAGAATGAATTTAAAAAATATGGTAATAATTATATTAATTGCTATATTGGTTATTTCTTATGTTAGACAAGAACTTACAA TGAACAAAATACACAAAGACATAGAAGCCAAGCAAACTCAGCTTAATGAGCTTCAAGATAAAAATAAGAAGTTACAAGAT GAGGTAAACCAATCTTCAACAGACGAATACATAGAGAGAATGGCTAGAGAAAGATTAGGTATGATTAAGGATGGCGAGAA GGTTATTACTAACTCAGATTCACCTCAAGACAAGCAAAATAATTCTGAAGTAAAAAACAATCAGAATAAATAA
Upstream 100 bases:
>100_bases TAGCTATACTATTAAAGAATCTGAGAATAATATTCAAAAATATAAGATATGCATTTAAAAATACATTCACAAATTAAAAA GTTAATTCATAAGGTAAAAA
Downstream 100 bases:
>100_bases GGTTATTATTAAAAATAACATATATTTTATTTATAAATTTAAGGAGGAAACTTTTAAACATGACCTTAATGGCAGGAAAC ATATTAGAGGGTAGAATAAT
Product: hypothetical protein
Products: NA
Alternate protein names: Septum Formation Initiator
Number of amino acids: Translated: 130; Mature: 130
Protein sequence:
>130_residues MLELSYNSVYNRLISYRCKYGGIRVKKRMNLKNMVIIILIAILVISYVRQELTMNKIHKDIEAKQTQLNELQDKNKKLQD EVNQSSTDEYIERMARERLGMIKDGEKVITNSDSPQDKQNNSEVKNNQNK
Sequences:
>Translated_130_residues MLELSYNSVYNRLISYRCKYGGIRVKKRMNLKNMVIIILIAILVISYVRQELTMNKIHKDIEAKQTQLNELQDKNKKLQD EVNQSSTDEYIERMARERLGMIKDGEKVITNSDSPQDKQNNSEVKNNQNK >Mature_130_residues MLELSYNSVYNRLISYRCKYGGIRVKKRMNLKNMVIIILIAILVISYVRQELTMNKIHKDIEAKQTQLNELQDKNKKLQD EVNQSSTDEYIERMARERLGMIKDGEKVITNSDSPQDKQNNSEVKNNQNK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15280; Mature: 15280
Theoretical pI: Translated: 9.91; Mature: 9.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLELSYNSVYNRLISYRCKYGGIRVKKRMNLKNMVIIILIAILVISYVRQELTMNKIHKD CCCCCHHHHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IEAKQTQLNELQDKNKKLQDEVNQSSTDEYIERMARERLGMIKDGEKVITNSDSPQDKQN HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC NSEVKNNQNK CHHHCCCCCC >Mature Secondary Structure MLELSYNSVYNRLISYRCKYGGIRVKKRMNLKNMVIIILIAILVISYVRQELTMNKIHKD CCCCCHHHHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IEAKQTQLNELQDKNKKLQDEVNQSSTDEYIERMARERLGMIKDGEKVITNSDSPQDKQN HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC NSEVKNNQNK CHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA