Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is corA [H]

Identifier: 18311439

GI number: 18311439

Start: 2802893

End: 2803837

Strand: Direct

Name: corA [H]

Synonym: CPE2457

Alternate gene names: 18311439

Gene position: 2802893-2803837 (Clockwise)

Preceding gene: 18311437

Following gene: 18311440

Centisome position: 92.46

GC content: 27.09

Gene sequence:

>945_bases
ATGATTCAGATATATAAATCTTTAAGTGAAAATGATGGGACTTTAAAGAAAATTGCTTCCCTTGAACCAGGTTGTTGGGT
TAATATAATAGCACCTTCTCAGGAAGAATTACTTCTTATTTCTAAAAAAACAGGAGTTCCTTTAGAATTTTTAAGAGCAC
CTTTAGATGATGAAGAAACTTCTCGTATAGAAATTGAAGGAGATTTTATATTAATAATAGTCGATATTCCTTTTACAGAA
ATGGAGGATAACTCCTTAACATATGATACTTATCCATTAGCAATAATTCATACAAAAAATGAATTAATTACTGTATGCTT
AAAAAATAGTAAGGTATTAACCGACTTCTCTTCAAACAAAGTTCGTAATTTTTACTCATTTAAAAAATCAAGATTTATTT
TACAAATTCTAAACAGAGTTTCTACATATTATCTTTTATACTTAAGACAGATAGATAAGAAAAGTATTATGATAGAAAAA
CGTCTTCATAAATCAATGAAAAACAGAGAGTTAGTACAATTGCACTCATTAAGTAAATCCTTAGTATATTTCTCAACATC
CTTAAAATCTAATGAAATTACATTAGAAAAGATGTTAAAACTTGATGTTATTCAAAGATATGAAGAAGATAAAGATGTTT
TAGAAGATGTAATAATAGAAAATAAACAGGCTATTGAGATGACTGATATTTATAGTAACATTCTAGGTAGTACCATGGAC
TTCTTTGCTTCTGTTATTTCTAATAACCTAAACATAGTGATGAAAGTCTTAGCTTCAGTTACAATCCTTATGTCTACCCT
TACAGTTATCTCTGGTATATACGGAATGAACTTTGACTATTTACCACTATTACACCATCCATATGGGTTCCATATAATAA
TGACTTTATCTGTAATACTTTGTGGTGTAATAGCATTTATATTATATAAAAAAGATATGTTTTAA

Upstream 100 bases:

>100_bases
ATATCTAAGCTAATTATAAAAATTATCTTGATTTTATTTTAAATAACTTGTTTAATGATAATTGAAACAAAATATAACTT
AATGCTTTGGGAGGGAGAAA

Downstream 100 bases:

>100_bases
ATTTATCTGTAACCATAAAAAGATTTTTGCATATAATTAACTAAAAGATTATTGAGAGCAATTTATGCTCTCTATTTTTT
TAGGAGGTTTTATGGTGAAA

Product: transport protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 314; Mature: 314

Protein sequence:

>314_residues
MIQIYKSLSENDGTLKKIASLEPGCWVNIIAPSQEELLLISKKTGVPLEFLRAPLDDEETSRIEIEGDFILIIVDIPFTE
MEDNSLTYDTYPLAIIHTKNELITVCLKNSKVLTDFSSNKVRNFYSFKKSRFILQILNRVSTYYLLYLRQIDKKSIMIEK
RLHKSMKNRELVQLHSLSKSLVYFSTSLKSNEITLEKMLKLDVIQRYEEDKDVLEDVIIENKQAIEMTDIYSNILGSTMD
FFASVISNNLNIVMKVLASVTILMSTLTVISGIYGMNFDYLPLLHHPYGFHIIMTLSVILCGVIAFILYKKDMF

Sequences:

>Translated_314_residues
MIQIYKSLSENDGTLKKIASLEPGCWVNIIAPSQEELLLISKKTGVPLEFLRAPLDDEETSRIEIEGDFILIIVDIPFTE
MEDNSLTYDTYPLAIIHTKNELITVCLKNSKVLTDFSSNKVRNFYSFKKSRFILQILNRVSTYYLLYLRQIDKKSIMIEK
RLHKSMKNRELVQLHSLSKSLVYFSTSLKSNEITLEKMLKLDVIQRYEEDKDVLEDVIIENKQAIEMTDIYSNILGSTMD
FFASVISNNLNIVMKVLASVTILMSTLTVISGIYGMNFDYLPLLHHPYGFHIIMTLSVILCGVIAFILYKKDMF
>Mature_314_residues
MIQIYKSLSENDGTLKKIASLEPGCWVNIIAPSQEELLLISKKTGVPLEFLRAPLDDEETSRIEIEGDFILIIVDIPFTE
MEDNSLTYDTYPLAIIHTKNELITVCLKNSKVLTDFSSNKVRNFYSFKKSRFILQILNRVSTYYLLYLRQIDKKSIMIEK
RLHKSMKNRELVQLHSLSKSLVYFSTSLKSNEITLEKMLKLDVIQRYEEDKDVLEDVIIENKQAIEMTDIYSNILGSTMD
FFASVISNNLNIVMKVLASVTILMSTLTVISGIYGMNFDYLPLLHHPYGFHIIMTLSVILCGVIAFILYKKDMF

Specific function: Mediates influx of magnesium ions [H]

COG id: COG0598

COG function: function code P; Mg2+ and Co2+ transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CorA metal ion transporter (MIT) (TC 1.A.35) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004488
- InterPro:   IPR002523 [H]

Pfam domain/function: PF01544 CorA [H]

EC number: NA

Molecular weight: Translated: 36171; Mature: 36171

Theoretical pI: Translated: 6.26; Mature: 6.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIQIYKSLSENDGTLKKIASLEPGCWVNIIAPSQEELLLISKKTGVPLEFLRAPLDDEET
CEEEECCCCCCCCHHHHHHCCCCCCEEEEECCCCCCEEEEECCCCCCHHHHHCCCCCCCC
SRIEIEGDFILIIVDIPFTEMEDNSLTYDTYPLAIIHTKNELITVCLKNSKVLTDFSSNK
CEEEEECCEEEEEEECCCCCCCCCCEEEECEEEEEEEECCCEEEEEECCCEEEECCCCCH
VRNFYSFKKSRFILQILNRVSTYYLLYLRQIDKKSIMIEKRLHKSMKNRELVQLHSLSKS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCHHHHHHHHHHH
LVYFSTSLKSNEITLEKMLKLDVIQRYEEDKDVLEDVIIENKQAIEMTDIYSNILGSTMD
HEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
FFASVISNNLNIVMKVLASVTILMSTLTVISGIYGMNFDYLPLLHHPYGFHIIMTLSVIL
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCHHHHHHHHHHH
CGVIAFILYKKDMF
HHHHHHHHHHHCCC
>Mature Secondary Structure
MIQIYKSLSENDGTLKKIASLEPGCWVNIIAPSQEELLLISKKTGVPLEFLRAPLDDEET
CEEEECCCCCCCCHHHHHHCCCCCCEEEEECCCCCCEEEEECCCCCCHHHHHCCCCCCCC
SRIEIEGDFILIIVDIPFTEMEDNSLTYDTYPLAIIHTKNELITVCLKNSKVLTDFSSNK
CEEEEECCEEEEEEECCCCCCCCCCEEEECEEEEEEEECCCEEEEEECCCEEEECCCCCH
VRNFYSFKKSRFILQILNRVSTYYLLYLRQIDKKSIMIEKRLHKSMKNRELVQLHSLSKS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCHHHHHHHHHHH
LVYFSTSLKSNEITLEKMLKLDVIQRYEEDKDVLEDVIIENKQAIEMTDIYSNILGSTMD
HEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
FFASVISNNLNIVMKVLASVTILMSTLTVISGIYGMNFDYLPLLHHPYGFHIIMTLSVIL
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCHHHHHHHHHHH
CGVIAFILYKKDMF
HHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]