Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is 18311425

Identifier: 18311425

GI number: 18311425

Start: 2791734

End: 2792333

Strand: Reverse

Name: 18311425

Synonym: CPE2443

Alternate gene names: NA

Gene position: 2792333-2791734 (Counterclockwise)

Preceding gene: 18311426

Following gene: 18311424

Centisome position: 92.11

GC content: 26.0

Gene sequence:

>600_bases
ATGAAACAAGGGCAGATATTTTTAAGGCTTTGCTTATGGTATTGCTTAAGTAATTTATGGGAGTTGAAAATTTTGCTTTG
TGAGAGTTGTAATAAAAATAATGCAACAATACAATTATTAAAAAGTACTAAGGGAAAAAAAGAAAGCTTAATGCTTTGTG
ATAAATGTGCAATCGAAATAATGAGCCTTGCACTAGAAGATGAGGAGATAAATTTAGAAGATTTTTTATTAGATTTAAAT
ACTTATATAGAGTGCATTGAAGAGAGGGTTAAGGATAAAGCTTTAGTATGTAAAAATTGTGGAACAAGATTTTCTGATTT
TGAAGAAAATAATTTTTTAGGCTGTGAAAAATGCTATGAGATATTTAAAAATAGGATAATATTTTTATTAAATTTAGAAG
AAGCAGAGATAAAGCATAGAGGGAAACAACCTAAAACAATAAAAAAGGACTTAAAGAAATTAGAAATCTTAAATTTACAA
GAAAAATTAAAAATTAATATACTGAAAGAGGAATATGAAGAAGCTATTATTACTAAGAAAAAAATACATGATTTAAAAGA
GAGTATAAGGGAGGATAGTAATAGTGGTTCAATGGATTAG

Upstream 100 bases:

>100_bases
GTAGATAATTTACTTGAACATAATATCATAGATGAGAAAGCAGCAAATCTTACTAAGGTTGCAATAAATGATAGAACCCT
TCAGAGTTCTAAGAATATAA

Downstream 100 bases:

>100_bases
CCCCTTAGATAATAGTATAGTAATTGCATCAAAAGTTAAAATCTTAAGAAACATAAAAGGAATTAAATTCACTAAGCTAT
TAAATGAAGAGGAATTTAAT

Product: hypothetical protein

Products: NA

Alternate protein names: UVR Domain Protein; Modulator Of CtsR Repression Protein; ClpC ATPase; Modulator Of Heat Shock Repressor CtsR McsA; Activator Of Protein Kinase McsB; UvrB/UvrC Domain-Containing Protein; DNA Repair Protein; UvrB/UvrC Motif-Containing Protein; Modulator Of CtsR Repression McsA; UVR Domain-Containing Protein; YacH Protein; UvrB/UvrC Motif Domain Family Protein

Number of amino acids: Translated: 199; Mature: 199

Protein sequence:

>199_residues
MKQGQIFLRLCLWYCLSNLWELKILLCESCNKNNATIQLLKSTKGKKESLMLCDKCAIEIMSLALEDEEINLEDFLLDLN
TYIECIEERVKDKALVCKNCGTRFSDFEENNFLGCEKCYEIFKNRIIFLLNLEEAEIKHRGKQPKTIKKDLKKLEILNLQ
EKLKINILKEEYEEAIITKKKIHDLKESIREDSNSGSMD

Sequences:

>Translated_199_residues
MKQGQIFLRLCLWYCLSNLWELKILLCESCNKNNATIQLLKSTKGKKESLMLCDKCAIEIMSLALEDEEINLEDFLLDLN
TYIECIEERVKDKALVCKNCGTRFSDFEENNFLGCEKCYEIFKNRIIFLLNLEEAEIKHRGKQPKTIKKDLKKLEILNLQ
EKLKINILKEEYEEAIITKKKIHDLKESIREDSNSGSMD
>Mature_199_residues
MKQGQIFLRLCLWYCLSNLWELKILLCESCNKNNATIQLLKSTKGKKESLMLCDKCAIEIMSLALEDEEINLEDFLLDLN
TYIECIEERVKDKALVCKNCGTRFSDFEENNFLGCEKCYEIFKNRIIFLLNLEEAEIKHRGKQPKTIKKDLKKLEILNLQ
EKLKINILKEEYEEAIITKKKIHDLKESIREDSNSGSMD

Specific function: Unknown

COG id: COG3880

COG function: function code S; Uncharacterized protein with conserved CXXC pairs

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23351; Mature: 23351

Theoretical pI: Translated: 5.52; Mature: 5.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
7.5 %Cys+Met (Translated Protein)
5.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
7.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQGQIFLRLCLWYCLSNLWELKILLCESCNKNNATIQLLKSTKGKKESLMLCDKCAIEI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHCCCCHHHHHHHHHHHHHH
MSLALEDEEINLEDFLLDLNTYIECIEERVKDKALVCKNCGTRFSDFEENNFLGCEKCYE
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHH
IFKNRIIFLLNLEEAEIKHRGKQPKTIKKDLKKLEILNLQEKLKINILKEEYEEAIITKK
HHHCCEEEEEECCHHHHHHCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH
KIHDLKESIREDSNSGSMD
HHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MKQGQIFLRLCLWYCLSNLWELKILLCESCNKNNATIQLLKSTKGKKESLMLCDKCAIEI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHCCCCHHHHHHHHHHHHHH
MSLALEDEEINLEDFLLDLNTYIECIEERVKDKALVCKNCGTRFSDFEENNFLGCEKCYE
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHH
IFKNRIIFLLNLEEAEIKHRGKQPKTIKKDLKKLEILNLQEKLKINILKEEYEEAIITKK
HHHCCEEEEEECCHHHHHHCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH
KIHDLKESIREDSNSGSMD
HHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA