Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is secE

Identifier: 18311401

GI number: 18311401

Start: 2768720

End: 2768944

Strand: Reverse

Name: secE

Synonym: CPE2419

Alternate gene names: NA

Gene position: 2768944-2768720 (Counterclockwise)

Preceding gene: 18311402

Following gene: 18311400

Centisome position: 91.34

GC content: 32.0

Gene sequence:

>225_bases
ATGGCTGCAAAGCAAAATGTAAATGAAAAAAGCAGAGGCTTTGGTATAACAAAGTTCTTTAGAGGGGTTAAGGCTGAAAT
CAAAAGAATAACTTGGCCACCAAAAGAAGAAGCTAAAAAGGCCATTATTGCAGTAATTGTATTTACTGTAATATCTATTG
CTTTAATAGGAGTAATGGATTTTGTATTTAAGAACCTCTTTGAGTTAGTGTTTGGACTTAAATAA

Upstream 100 bases:

>100_bases
ACTGCAAATTCTGTAAGACTCATACTCTTCACAGAGAAACTAAGTAGTGTTTTGGATAGAAAATTCTAATGCATTATTAT
GGTGTTAAGGATGTGAATTT

Downstream 100 bases:

>100_bases
TATAAGGGAGGTTTGGTGATTTATTCACCGGTATGATATGAGTGATAGAGCTAGATGGTACGTAGTACACACATATTCAG
GATACGAAAATAAAGTTAAA

Product: preprotein translocase subunit SecE

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 74; Mature: 73

Protein sequence:

>74_residues
MAAKQNVNEKSRGFGITKFFRGVKAEIKRITWPPKEEAKKAIIAVIVFTVISIALIGVMDFVFKNLFELVFGLK

Sequences:

>Translated_74_residues
MAAKQNVNEKSRGFGITKFFRGVKAEIKRITWPPKEEAKKAIIAVIVFTVISIALIGVMDFVFKNLFELVFGLK
>Mature_73_residues
AAKQNVNEKSRGFGITKFFRGVKAEIKRITWPPKEEAKKAIIAVIVFTVISIALIGVMDFVFKNLFELVFGLK

Specific function: Unknown

COG id: COG0690

COG function: function code U; Preprotein translocase subunit SecE

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8344; Mature: 8213

Theoretical pI: Translated: 10.96; Mature: 10.96

Prosite motif: PS01067 SECE_SEC61G

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAKQNVNEKSRGFGITKFFRGVKAEIKRITWPPKEEAKKAIIAVIVFTVISIALIGVMD
CCCCCCCCHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
FVFKNLFELVFGLK
HHHHHHHHHHHCCC
>Mature Secondary Structure 
AAKQNVNEKSRGFGITKFFRGVKAEIKRITWPPKEEAKKAIIAVIVFTVISIALIGVMD
CCCCCCCHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
FVFKNLFELVFGLK
HHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA