Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is 18311310

Identifier: 18311310

GI number: 18311310

Start: 2679676

End: 2680200

Strand: Direct

Name: 18311310

Synonym: CPE2328

Alternate gene names: NA

Gene position: 2679676-2680200 (Clockwise)

Preceding gene: 18311304

Following gene: 18311312

Centisome position: 88.4

GC content: 28.76

Gene sequence:

>525_bases
ATGAGCTATACTACAGAAAAGCAACCTCAAGGAAAAGCCTTGGATATAAAAGGATTTTTAAGGGAAGCTTTAATCTCAGA
AATAGTTGCCATCAATGGTTATAGTAAACATATAGATGAAATTGCTTTAGTGGATATAAAAGAATTATTACATCACATAA
TGGAAGATGAAAAAAGACACTATGGTCAATTTTTAGAAGCTCTCAGAAGATATGATAAAGAGGAATTTGAAGTCTATGTA
GAATCAGTTGATCATGTAGAAATAAAAGACAAACCTTTAAAGAAAACATATCACGAAAATAAAAAATTAACTGCTTATAG
TATTTTAAATAAAATTCGAGATGATATTAAAGGAGAATACGAGGCCATATTACTCTATGATGATTTAATAAATAAAATAG
AAGATAAATGCCTTGTTAAAATGATAAGAGATATAACTAAGGAGGAAAAAGAGCATGTGGAGGAACTTACCCTTGCTTTA
ATGAGACTTGATTCAGATAAGTATGGACCAATTGAAGATAATTAA

Upstream 100 bases:

>100_bases
AAAAAAATCTTGGAATAAGTAAATATCTATCTTTAACTGTTCCTTTTCCTAGGAAAAATCATATTATAAATACTATAAAA
ATAATTTAGGAGATTTTTTT

Downstream 100 bases:

>100_bases
TATAACTTTTAATAATCAAATAAATAAAAATATTTTAAATCATAAAAAGCTATAAATAACATGAATAGTTTTAAATAAAA
TTATCATGTATTTATAGCTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 174; Mature: 173

Protein sequence:

>174_residues
MSYTTEKQPQGKALDIKGFLREALISEIVAINGYSKHIDEIALVDIKELLHHIMEDEKRHYGQFLEALRRYDKEEFEVYV
ESVDHVEIKDKPLKKTYHENKKLTAYSILNKIRDDIKGEYEAILLYDDLINKIEDKCLVKMIRDITKEEKEHVEELTLAL
MRLDSDKYGPIEDN

Sequences:

>Translated_174_residues
MSYTTEKQPQGKALDIKGFLREALISEIVAINGYSKHIDEIALVDIKELLHHIMEDEKRHYGQFLEALRRYDKEEFEVYV
ESVDHVEIKDKPLKKTYHENKKLTAYSILNKIRDDIKGEYEAILLYDDLINKIEDKCLVKMIRDITKEEKEHVEELTLAL
MRLDSDKYGPIEDN
>Mature_173_residues
SYTTEKQPQGKALDIKGFLREALISEIVAINGYSKHIDEIALVDIKELLHHIMEDEKRHYGQFLEALRRYDKEEFEVYVE
SVDHVEIKDKPLKKTYHENKKLTAYSILNKIRDDIKGEYEAILLYDDLINKIEDKCLVKMIRDITKEEKEHVEELTLALM
RLDSDKYGPIEDN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20542; Mature: 20411

Theoretical pI: Translated: 4.95; Mature: 4.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYTTEKQPQGKALDIKGFLREALISEIVAINGYSKHIDEIALVDIKELLHHIMEDEKRH
CCCCCCCCCCCCEECHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
YGQFLEALRRYDKEEFEVYVESVDHVEIKDKPLKKTYHENKKLTAYSILNKIRDDIKGEY
HHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHCCCH
EAILLYDDLINKIEDKCLVKMIRDITKEEKEHVEELTLALMRLDSDKYGPIEDN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
SYTTEKQPQGKALDIKGFLREALISEIVAINGYSKHIDEIALVDIKELLHHIMEDEKRH
CCCCCCCCCCCEECHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
YGQFLEALRRYDKEEFEVYVESVDHVEIKDKPLKKTYHENKKLTAYSILNKIRDDIKGEY
HHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHCCCH
EAILLYDDLINKIEDKCLVKMIRDITKEEKEHVEELTLALMRLDSDKYGPIEDN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA