| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is 18311226
Identifier: 18311226
GI number: 18311226
Start: 2571905
End: 2572660
Strand: Direct
Name: 18311226
Synonym: CPE2244
Alternate gene names: NA
Gene position: 2571905-2572660 (Clockwise)
Preceding gene: 18311219
Following gene: 18311227
Centisome position: 84.84
GC content: 24.74
Gene sequence:
>756_bases ATGAATAAAAAGAAATGGGTAACTATAGGGATATTGCCTATAATGTGGTTGATTTATTTCTTATTTGAGTTTTTAACTGG AAGAATTGAAAAGAATTCTGAAACTCTTATGATGTTGTTTTTAACAATTCCTTTTGCATTAGTAGGATATCTCGTATATG TTTTAGTAAATAAATATAAAGATGGATTTAGCAAAAAAACATTGCTATGGATATTTATGATTCTAATGATTTTAGATCAA GGAATAAAATTTATTATACATAAATGGTTTTTCAATGATCATTTTAATATTATAGGTGATTTTTTAACCTTCCAACCAAT TATAAATACAGATGGCTCTTGGCTAAATGTTCGCTTTGGAACTGGATTAGACTTTGGATTCCTTATAATATTAAATTTAA TAGCATTAATAATATTCTTTGAATGTTATAGATATTATGTCCATAATGGCCATAAAGATTTTAATGCAGATATGTGTATA GTATTTATAATGGCTGGTGCTTTATGTTCTTTAATAGATAAGGTTTTTTATGGTGGAAGCTTAGACTTCATAGGTATAAG CAATTTATTTATAGCTGATTTTAAAGATATATATATAAATTTAGCTATTTTATTTTTCATCCTATGTATATACTTCAATG ATTATTGGAAAGATGATAGCACTAGCACCTTAAAAGATGATCTTGCTTCAGTAAAAAGATTCTTTATTTTTGCTAAAAAT GATTTACTAGTAAATATATTAAAACTTAAGAAATAG
Upstream 100 bases:
>100_bases ACTATTATAGACTAAAGTTATAGATATCTCTTTAATATTTATAAAAGTTATTGTTATTTTAATTAAATATTCTAATGGTA TATCTTATAGGGAGGTAATA
Downstream 100 bases:
>100_bases TATATTTGTAAGATATCACAAATTTAATCTAATTATCCATTTATAATGGACAAAGCCTCTTATTGTGATATATTAAAGGT GTAGAGAATTTAATATATTA
Product: hypothetical protein
Products: NA
Alternate protein names: Signal Peptidase
Number of amino acids: Translated: 251; Mature: 251
Protein sequence:
>251_residues MNKKKWVTIGILPIMWLIYFLFEFLTGRIEKNSETLMMLFLTIPFALVGYLVYVLVNKYKDGFSKKTLLWIFMILMILDQ GIKFIIHKWFFNDHFNIIGDFLTFQPIINTDGSWLNVRFGTGLDFGFLIILNLIALIIFFECYRYYVHNGHKDFNADMCI VFIMAGALCSLIDKVFYGGSLDFIGISNLFIADFKDIYINLAILFFILCIYFNDYWKDDSTSTLKDDLASVKRFFIFAKN DLLVNILKLKK
Sequences:
>Translated_251_residues MNKKKWVTIGILPIMWLIYFLFEFLTGRIEKNSETLMMLFLTIPFALVGYLVYVLVNKYKDGFSKKTLLWIFMILMILDQ GIKFIIHKWFFNDHFNIIGDFLTFQPIINTDGSWLNVRFGTGLDFGFLIILNLIALIIFFECYRYYVHNGHKDFNADMCI VFIMAGALCSLIDKVFYGGSLDFIGISNLFIADFKDIYINLAILFFILCIYFNDYWKDDSTSTLKDDLASVKRFFIFAKN DLLVNILKLKK >Mature_251_residues MNKKKWVTIGILPIMWLIYFLFEFLTGRIEKNSETLMMLFLTIPFALVGYLVYVLVNKYKDGFSKKTLLWIFMILMILDQ GIKFIIHKWFFNDHFNIIGDFLTFQPIINTDGSWLNVRFGTGLDFGFLIILNLIALIIFFECYRYYVHNGHKDFNADMCI VFIMAGALCSLIDKVFYGGSLDFIGISNLFIADFKDIYINLAILFFILCIYFNDYWKDDSTSTLKDDLASVKRFFIFAKN DLLVNILKLKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.4.23.36
Molecular weight: Translated: 29468; Mature: 29468
Theoretical pI: Translated: 8.28; Mature: 8.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKKKWVTIGILPIMWLIYFLFEFLTGRIEKNSETLMMLFLTIPFALVGYLVYVLVNKYK CCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH DGFSKKTLLWIFMILMILDQGIKFIIHKWFFNDHFNIIGDFLTFQPIINTDGSWLNVRFG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCEEEEEEC TGLDFGFLIILNLIALIIFFECYRYYVHNGHKDFNADMCIVFIMAGALCSLIDKVFYGGS CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC LDFIGISNLFIADFKDIYINLAILFFILCIYFNDYWKDDSTSTLKDDLASVKRFFIFAKN CCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHEECC DLLVNILKLKK HHHHHHHHHCC >Mature Secondary Structure MNKKKWVTIGILPIMWLIYFLFEFLTGRIEKNSETLMMLFLTIPFALVGYLVYVLVNKYK CCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH DGFSKKTLLWIFMILMILDQGIKFIIHKWFFNDHFNIIGDFLTFQPIINTDGSWLNVRFG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCEEEEEEC TGLDFGFLIILNLIALIIFFECYRYYVHNGHKDFNADMCIVFIMAGALCSLIDKVFYGGS CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC LDFIGISNLFIADFKDIYINLAILFFILCIYFNDYWKDDSTSTLKDDLASVKRFFIFAKN CCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHEECC DLLVNILKLKK HHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA