Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is 18311226

Identifier: 18311226

GI number: 18311226

Start: 2571905

End: 2572660

Strand: Direct

Name: 18311226

Synonym: CPE2244

Alternate gene names: NA

Gene position: 2571905-2572660 (Clockwise)

Preceding gene: 18311219

Following gene: 18311227

Centisome position: 84.84

GC content: 24.74

Gene sequence:

>756_bases
ATGAATAAAAAGAAATGGGTAACTATAGGGATATTGCCTATAATGTGGTTGATTTATTTCTTATTTGAGTTTTTAACTGG
AAGAATTGAAAAGAATTCTGAAACTCTTATGATGTTGTTTTTAACAATTCCTTTTGCATTAGTAGGATATCTCGTATATG
TTTTAGTAAATAAATATAAAGATGGATTTAGCAAAAAAACATTGCTATGGATATTTATGATTCTAATGATTTTAGATCAA
GGAATAAAATTTATTATACATAAATGGTTTTTCAATGATCATTTTAATATTATAGGTGATTTTTTAACCTTCCAACCAAT
TATAAATACAGATGGCTCTTGGCTAAATGTTCGCTTTGGAACTGGATTAGACTTTGGATTCCTTATAATATTAAATTTAA
TAGCATTAATAATATTCTTTGAATGTTATAGATATTATGTCCATAATGGCCATAAAGATTTTAATGCAGATATGTGTATA
GTATTTATAATGGCTGGTGCTTTATGTTCTTTAATAGATAAGGTTTTTTATGGTGGAAGCTTAGACTTCATAGGTATAAG
CAATTTATTTATAGCTGATTTTAAAGATATATATATAAATTTAGCTATTTTATTTTTCATCCTATGTATATACTTCAATG
ATTATTGGAAAGATGATAGCACTAGCACCTTAAAAGATGATCTTGCTTCAGTAAAAAGATTCTTTATTTTTGCTAAAAAT
GATTTACTAGTAAATATATTAAAACTTAAGAAATAG

Upstream 100 bases:

>100_bases
ACTATTATAGACTAAAGTTATAGATATCTCTTTAATATTTATAAAAGTTATTGTTATTTTAATTAAATATTCTAATGGTA
TATCTTATAGGGAGGTAATA

Downstream 100 bases:

>100_bases
TATATTTGTAAGATATCACAAATTTAATCTAATTATCCATTTATAATGGACAAAGCCTCTTATTGTGATATATTAAAGGT
GTAGAGAATTTAATATATTA

Product: hypothetical protein

Products: NA

Alternate protein names: Signal Peptidase

Number of amino acids: Translated: 251; Mature: 251

Protein sequence:

>251_residues
MNKKKWVTIGILPIMWLIYFLFEFLTGRIEKNSETLMMLFLTIPFALVGYLVYVLVNKYKDGFSKKTLLWIFMILMILDQ
GIKFIIHKWFFNDHFNIIGDFLTFQPIINTDGSWLNVRFGTGLDFGFLIILNLIALIIFFECYRYYVHNGHKDFNADMCI
VFIMAGALCSLIDKVFYGGSLDFIGISNLFIADFKDIYINLAILFFILCIYFNDYWKDDSTSTLKDDLASVKRFFIFAKN
DLLVNILKLKK

Sequences:

>Translated_251_residues
MNKKKWVTIGILPIMWLIYFLFEFLTGRIEKNSETLMMLFLTIPFALVGYLVYVLVNKYKDGFSKKTLLWIFMILMILDQ
GIKFIIHKWFFNDHFNIIGDFLTFQPIINTDGSWLNVRFGTGLDFGFLIILNLIALIIFFECYRYYVHNGHKDFNADMCI
VFIMAGALCSLIDKVFYGGSLDFIGISNLFIADFKDIYINLAILFFILCIYFNDYWKDDSTSTLKDDLASVKRFFIFAKN
DLLVNILKLKK
>Mature_251_residues
MNKKKWVTIGILPIMWLIYFLFEFLTGRIEKNSETLMMLFLTIPFALVGYLVYVLVNKYKDGFSKKTLLWIFMILMILDQ
GIKFIIHKWFFNDHFNIIGDFLTFQPIINTDGSWLNVRFGTGLDFGFLIILNLIALIIFFECYRYYVHNGHKDFNADMCI
VFIMAGALCSLIDKVFYGGSLDFIGISNLFIADFKDIYINLAILFFILCIYFNDYWKDDSTSTLKDDLASVKRFFIFAKN
DLLVNILKLKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.4.23.36

Molecular weight: Translated: 29468; Mature: 29468

Theoretical pI: Translated: 8.28; Mature: 8.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKKKWVTIGILPIMWLIYFLFEFLTGRIEKNSETLMMLFLTIPFALVGYLVYVLVNKYK
CCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
DGFSKKTLLWIFMILMILDQGIKFIIHKWFFNDHFNIIGDFLTFQPIINTDGSWLNVRFG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCEEEEEEC
TGLDFGFLIILNLIALIIFFECYRYYVHNGHKDFNADMCIVFIMAGALCSLIDKVFYGGS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
LDFIGISNLFIADFKDIYINLAILFFILCIYFNDYWKDDSTSTLKDDLASVKRFFIFAKN
CCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHEECC
DLLVNILKLKK
HHHHHHHHHCC
>Mature Secondary Structure
MNKKKWVTIGILPIMWLIYFLFEFLTGRIEKNSETLMMLFLTIPFALVGYLVYVLVNKYK
CCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
DGFSKKTLLWIFMILMILDQGIKFIIHKWFFNDHFNIIGDFLTFQPIINTDGSWLNVRFG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCEEEEEEC
TGLDFGFLIILNLIALIIFFECYRYYVHNGHKDFNADMCIVFIMAGALCSLIDKVFYGGS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
LDFIGISNLFIADFKDIYINLAILFFILCIYFNDYWKDDSTSTLKDDLASVKRFFIFAKN
CCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHEECC
DLLVNILKLKK
HHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA