Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is yhaO [H]

Identifier: 18311142

GI number: 18311142

Start: 2476240

End: 2477382

Strand: Reverse

Name: yhaO [H]

Synonym: CPE2160

Alternate gene names: 18311142

Gene position: 2477382-2476240 (Counterclockwise)

Preceding gene: 18311143

Following gene: 18311141

Centisome position: 81.72

GC content: 27.38

Gene sequence:

>1143_bases
TTGGTGAAAAAGGTAAAAATATTGCATTGTAGTGATATTCATTTTGATACTCCTTTTAAAGAGTTACCAAAGGAAATTGG
TACAATGAGGAGAGCTGAGTTAAGAGAAAGCTTTAGTAAAATAATAAATAGAGGAATTGATGAAAAAGTTGATTTAGTTC
TTTTAGCGGGAGACCTTTTTGACAATGATACTATAGAAAAGAGTACTCTTACTTTTATAAAGGATCAAATGGATAAACTT
AAAAAACATAATATAAGAGTATTTATTTCAGCAGGAAATCATGATCCATATAATAAAAAATTTTTTTATAATATGGTTAA
CTTAGGGGAAAATGTTCATATATTTAAGGATGAAATTGAAAGAGTAGAAATACCTGAATTAAATACTGTTGTTTATGGAG
CATCCTTTAAGGAAAAATATATAAGAGAGTCAAAGCTTAAGGATTTTACTCCAAAAGAAGAGGATAAGGATTTAGTAAAA
ATAATGGTTTTACATGGGGATTTAGGGAATAATGAAACAGGGGAGTATAATCCCTTACTATTTAAGGAAATAGAAGAGAG
TAAGATGGATTATATTGCTTTAGGACATATTCATAAATTTTCAGGAATAAAAAGAATCGGTAAGACCTATTATGCATATT
CAGGATGTCCAGAGGGAAGAGGATTTGATGAAGAAGGGGATAAAGGAATAATATTAGGAGAGGTATCCCTTGGAGTTGTA
GACCTAGATTTTATAAAGACTAATAAAAGAGAGTATTTTCTTAAAGAAATTGATATATCAAATTGTAAAACTAAAGAAGA
AGTTATAGATAAGATACTTAATACTATTTCAAAAGAATCAAGAGAAAAAAATCTATTTAAAATCATCTTAAAAGGGAATG
TAGAAGAGTCTTTTAAAATAGATAGTGATTTAATAGAAAACTTAATTAGAGATAAATTCTTTTACTGTAAGATTGTAAAT
TCTACTAGAATGAAAATAGATATTGATGAAATGAGCAATGAGTATTCAATTAAGGGGATTTTTTGTTCTTTAATCAAGGA
TGCTTTAGAATCTAATGAAGAGGATGAAGAGATACTAGATATAGCTTTTAGAATTGGTATGGAGAGTATTTTAGATGGAG
AAGTGAATTTAAATGATAATTAA

Upstream 100 bases:

>100_bases
AAAAAAGATTACATAGAGGATTTATATCCTCTATGTAGTCTTTTTTTTTGACAATCTCTATGATAAAATTAGAATAAATT
GGAATAAGAGAGGTGTCATA

Downstream 100 bases:

>100_bases
GAAAATAAATGTGAAGTCCTTTGGAAAATTAAAAAATAAAGAAATAGAATTAAAAGATGGATTAAACATAATATATGGTG
AAAATGAAAGTGGAAAAAGT

Product: phosphoesterase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 380; Mature: 380

Protein sequence:

>380_residues
MVKKVKILHCSDIHFDTPFKELPKEIGTMRRAELRESFSKIINRGIDEKVDLVLLAGDLFDNDTIEKSTLTFIKDQMDKL
KKHNIRVFISAGNHDPYNKKFFYNMVNLGENVHIFKDEIERVEIPELNTVVYGASFKEKYIRESKLKDFTPKEEDKDLVK
IMVLHGDLGNNETGEYNPLLFKEIEESKMDYIALGHIHKFSGIKRIGKTYYAYSGCPEGRGFDEEGDKGIILGEVSLGVV
DLDFIKTNKREYFLKEIDISNCKTKEEVIDKILNTISKESREKNLFKIILKGNVEESFKIDSDLIENLIRDKFFYCKIVN
STRMKIDIDEMSNEYSIKGIFCSLIKDALESNEEDEEILDIAFRIGMESILDGEVNLNDN

Sequences:

>Translated_380_residues
MVKKVKILHCSDIHFDTPFKELPKEIGTMRRAELRESFSKIINRGIDEKVDLVLLAGDLFDNDTIEKSTLTFIKDQMDKL
KKHNIRVFISAGNHDPYNKKFFYNMVNLGENVHIFKDEIERVEIPELNTVVYGASFKEKYIRESKLKDFTPKEEDKDLVK
IMVLHGDLGNNETGEYNPLLFKEIEESKMDYIALGHIHKFSGIKRIGKTYYAYSGCPEGRGFDEEGDKGIILGEVSLGVV
DLDFIKTNKREYFLKEIDISNCKTKEEVIDKILNTISKESREKNLFKIILKGNVEESFKIDSDLIENLIRDKFFYCKIVN
STRMKIDIDEMSNEYSIKGIFCSLIKDALESNEEDEEILDIAFRIGMESILDGEVNLNDN
>Mature_380_residues
MVKKVKILHCSDIHFDTPFKELPKEIGTMRRAELRESFSKIINRGIDEKVDLVLLAGDLFDNDTIEKSTLTFIKDQMDKL
KKHNIRVFISAGNHDPYNKKFFYNMVNLGENVHIFKDEIERVEIPELNTVVYGASFKEKYIRESKLKDFTPKEEDKDLVK
IMVLHGDLGNNETGEYNPLLFKEIEESKMDYIALGHIHKFSGIKRIGKTYYAYSGCPEGRGFDEEGDKGIILGEVSLGVV
DLDFIKTNKREYFLKEIDISNCKTKEEVIDKILNTISKESREKNLFKIILKGNVEESFKIDSDLIENLIRDKFFYCKIVN
STRMKIDIDEMSNEYSIKGIFCSLIKDALESNEEDEEILDIAFRIGMESILDGEVNLNDN

Specific function: Unknown

COG id: COG0420

COG function: function code L; DNA repair exonuclease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the metallophosphoesterase superfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004843
- InterPro:   IPR014576 [H]

Pfam domain/function: PF00149 Metallophos [H]

EC number: NA

Molecular weight: Translated: 43968; Mature: 43968

Theoretical pI: Translated: 4.93; Mature: 4.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKKVKILHCSDIHFDTPFKELPKEIGTMRRAELRESFSKIINRGIDEKVDLVLLAGDLF
CCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCC
DNDTIEKSTLTFIKDQMDKLKKHNIRVFISAGNHDPYNKKFFYNMVNLGENVHIFKDEIE
CCCCCCHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCHHHHHHHHHCCCCEEEEHHHHH
RVEIPELNTVVYGASFKEKYIRESKLKDFTPKEEDKDLVKIMVLHGDLGNNETGEYNPLL
EECCCCCCEEEECCCHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCHH
FKEIEESKMDYIALGHIHKFSGIKRIGKTYYAYSGCPEGRGFDEEGDKGIILGEVSLGVV
HHHHHHCCCCEEEECCHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCEEEEEEEEECEE
DLDFIKTNKREYFLKEIDISNCKTKEEVIDKILNTISKESREKNLFKIILKGNVEESFKI
EEEEEECCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCHHHCC
DSDLIENLIRDKFFYCKIVNSTRMKIDIDEMSNEYSIKGIFCSLIKDALESNEEDEEILD
CHHHHHHHHHCCEEEEEEECCCEEEEEHHHCCCCEEHHHHHHHHHHHHHHCCCCHHHHHH
IAFRIGMESILDGEVNLNDN
HHHHHCHHHHCCCCEECCCC
>Mature Secondary Structure
MVKKVKILHCSDIHFDTPFKELPKEIGTMRRAELRESFSKIINRGIDEKVDLVLLAGDLF
CCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCC
DNDTIEKSTLTFIKDQMDKLKKHNIRVFISAGNHDPYNKKFFYNMVNLGENVHIFKDEIE
CCCCCCHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCHHHHHHHHHCCCCEEEEHHHHH
RVEIPELNTVVYGASFKEKYIRESKLKDFTPKEEDKDLVKIMVLHGDLGNNETGEYNPLL
EECCCCCCEEEECCCHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCHH
FKEIEESKMDYIALGHIHKFSGIKRIGKTYYAYSGCPEGRGFDEEGDKGIILGEVSLGVV
HHHHHHCCCCEEEECCHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCEEEEEEEEECEE
DLDFIKTNKREYFLKEIDISNCKTKEEVIDKILNTISKESREKNLFKIILKGNVEESFKI
EEEEEECCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCHHHCC
DSDLIENLIRDKFFYCKIVNSTRMKIDIDEMSNEYSIKGIFCSLIKDALESNEEDEEILD
CHHHHHHHHHCCEEEEEEECCCEEEEEHHHCCCCEEHHHHHHHHHHHHHHCCCCHHHHHH
IAFRIGMESILDGEVNLNDN
HHHHHCHHHHCCCCEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9579061; 9384377 [H]