| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is 18311123
Identifier: 18311123
GI number: 18311123
Start: 2453167
End: 2453664
Strand: Reverse
Name: 18311123
Synonym: CPE2141
Alternate gene names: NA
Gene position: 2453664-2453167 (Counterclockwise)
Preceding gene: 18311124
Following gene: 18311122
Centisome position: 80.94
GC content: 27.11
Gene sequence:
>498_bases GTGAAAAGATTAATACTAATATTAATATGTCTTTTACTATTTATAGTAGATAATACTCTGGTACCTTTTTTCTCTATAAA AGGTGTTTATCCTAGTCTATTATTCACCTTTGCTGTACTATATGCTCTTATGAGTGGGTATTGGGAAGCGGTATTTATAG GAGTTTTATCAGGTTTCCTTCAAGATGTTTATTTTGTAAATGTCTTTGGGGTAAATATGTTAGTAAATATGTTAGTGTGC TTAATAGCTGCGTATATTGGGGAAAGTGTATTTAAGCATAAAAAAACAATTCCGGTACTATCAGTAGGTTTACTTACCAT AATAAAGTTTTTTATAGTGGCATTTATATTAAATTTAATTAATATAAGAATAAACTTATTAAGCTTTTGGATTATGGTAC TTTATAACGTAGTTATAGGATTCTTTATGTATAATTGGGTTTATAAATTATGCAACAGAGATCTTATGAAAAGAGAATGG AAAATAAGTGAAAAATAG
Upstream 100 bases:
>100_bases AAAAACATATGTTGATTTTAATAATTTACAAGAATTATTTGTAGTTGTACCACCATCAGAGAGAGATGGTATAGTTAAGT ATTAGAAAAGAGGGAGTAAA
Downstream 100 bases:
>100_bases GTGGTTACATGAGAAGTTCAATAAATGGAAAAACGCCTATAGATAGATATAAAATTCTCATAGGAATAATGATAATAGTA TTTGTATCTATAGTAGCAAG
Product: rod shape-determining protein MreD
Products: NA
Alternate protein names: Rod Shape Determining Protein MreD
Number of amino acids: Translated: 165; Mature: 165
Protein sequence:
>165_residues MKRLILILICLLLFIVDNTLVPFFSIKGVYPSLLFTFAVLYALMSGYWEAVFIGVLSGFLQDVYFVNVFGVNMLVNMLVC LIAAYIGESVFKHKKTIPVLSVGLLTIIKFFIVAFILNLINIRINLLSFWIMVLYNVVIGFFMYNWVYKLCNRDLMKREW KISEK
Sequences:
>Translated_165_residues MKRLILILICLLLFIVDNTLVPFFSIKGVYPSLLFTFAVLYALMSGYWEAVFIGVLSGFLQDVYFVNVFGVNMLVNMLVC LIAAYIGESVFKHKKTIPVLSVGLLTIIKFFIVAFILNLINIRINLLSFWIMVLYNVVIGFFMYNWVYKLCNRDLMKREW KISEK >Mature_165_residues MKRLILILICLLLFIVDNTLVPFFSIKGVYPSLLFTFAVLYALMSGYWEAVFIGVLSGFLQDVYFVNVFGVNMLVNMLVC LIAAYIGESVFKHKKTIPVLSVGLLTIIKFFIVAFILNLINIRINLLSFWIMVLYNVVIGFFMYNWVYKLCNRDLMKREW KISEK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19176; Mature: 19176
Theoretical pI: Translated: 9.74; Mature: 9.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRLILILICLLLFIVDNTLVPFFSIKGVYPSLLFTFAVLYALMSGYWEAVFIGVLSGFL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QDVYFVNVFGVNMLVNMLVCLIAAYIGESVFKHKKTIPVLSVGLLTIIKFFIVAFILNLI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH NIRINLLSFWIMVLYNVVIGFFMYNWVYKLCNRDLMKREWKISEK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MKRLILILICLLLFIVDNTLVPFFSIKGVYPSLLFTFAVLYALMSGYWEAVFIGVLSGFL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QDVYFVNVFGVNMLVNMLVCLIAAYIGESVFKHKKTIPVLSVGLLTIIKFFIVAFILNLI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH NIRINLLSFWIMVLYNVVIGFFMYNWVYKLCNRDLMKREWKISEK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA