Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is 18311114

Identifier: 18311114

GI number: 18311114

Start: 2442311

End: 2443018

Strand: Reverse

Name: 18311114

Synonym: CPE2132

Alternate gene names: NA

Gene position: 2443018-2442311 (Counterclockwise)

Preceding gene: 18311115

Following gene: 18311113

Centisome position: 80.59

GC content: 28.53

Gene sequence:

>708_bases
TTGAAGGTGCGATACTTAATTAAATTTACTAAAGATGCAGATATAAAATTTGTTTCTCACTTAGATTTAATGAGAACAAT
TCAAAGAATAGTAAGAAGAGCTGAGCTTCCAGTTGAATATTCAAAAGGATTTAACCCTCATATGGCCTTAGCAATAGCAC
AACCTTTATCAGTTGGTGTATATTCTGAGGGAGATTATCTAGACTTAAATTTAACTGAAGATATGAATGAAGAGGCAGTA
AAAGAAAAGTTAAATGAATTCTCAGCAAATGGTATTAGATTTTTAGAAGTTTCAAAGAGTCCAGTTATACACAATGTTAA
GAGATTACCAGCAGCTATGGCTCTTTTAGATGCTGCAAATTATACAATAAAAATAAGATATAATGATATTTCTAAGGCTG
AAGAAGAAGTTAATGCTTTAATGGCTCAAAAAGAAATAATAACAATAAAAAGAACTAAAAAAGGCGAAAAAGAAGCTGAT
ATAAAACCATTTATAAAAGATTTTAAATGTTGGACTAAGGACAATTATTTAATTGTAAATACAACTATAAGCTGTGGAAG
TAGAGAAAATCTTTCAGCAGATCTTTTAGCAAATGTTATAAAAGAAAATACATCAAATGTTAATGAAGAAGCTTTCGTAG
AAATAAAAAGAGTTGAGATGTATGCATACAAAGGGAATACATTAGTTCCTCTATATAAATACATCTAA

Upstream 100 bases:

>100_bases
AGAGAAAATGAAAAAGCTAAAACTGGTGAACCTACTCAAAACTGTAGAAAAGGATGTACAGGTTGTGGAGTAAATGTAAA
CTTTAAAGATGGGGAGTGTT

Downstream 100 bases:

>100_bases
ATTAGGAAGTGAATTCATGAGAGATATATACGTAGAAAGAAGAGAAAATTTATTAAGGGTTGCCATAAAGAAAAATAATC
TTTTAAGTGAGTGCTATATA

Product: hypothetical protein

Products: NA

Alternate protein names: Fe-S Oxidoreductase; Radical SAM Domain Protein; Elongator /MiaB/NifB; Radical Sam Protein; Radical SAM Family Protein; LOW QUALITY PROTEIN Fe-S Oxidoreductase

Number of amino acids: Translated: 235; Mature: 235

Protein sequence:

>235_residues
MKVRYLIKFTKDADIKFVSHLDLMRTIQRIVRRAELPVEYSKGFNPHMALAIAQPLSVGVYSEGDYLDLNLTEDMNEEAV
KEKLNEFSANGIRFLEVSKSPVIHNVKRLPAAMALLDAANYTIKIRYNDISKAEEEVNALMAQKEIITIKRTKKGEKEAD
IKPFIKDFKCWTKDNYLIVNTTISCGSRENLSADLLANVIKENTSNVNEEAFVEIKRVEMYAYKGNTLVPLYKYI

Sequences:

>Translated_235_residues
MKVRYLIKFTKDADIKFVSHLDLMRTIQRIVRRAELPVEYSKGFNPHMALAIAQPLSVGVYSEGDYLDLNLTEDMNEEAV
KEKLNEFSANGIRFLEVSKSPVIHNVKRLPAAMALLDAANYTIKIRYNDISKAEEEVNALMAQKEIITIKRTKKGEKEAD
IKPFIKDFKCWTKDNYLIVNTTISCGSRENLSADLLANVIKENTSNVNEEAFVEIKRVEMYAYKGNTLVPLYKYI
>Mature_235_residues
MKVRYLIKFTKDADIKFVSHLDLMRTIQRIVRRAELPVEYSKGFNPHMALAIAQPLSVGVYSEGDYLDLNLTEDMNEEAV
KEKLNEFSANGIRFLEVSKSPVIHNVKRLPAAMALLDAANYTIKIRYNDISKAEEEVNALMAQKEIITIKRTKKGEKEAD
IKPFIKDFKCWTKDNYLIVNTTISCGSRENLSADLLANVIKENTSNVNEEAFVEIKRVEMYAYKGNTLVPLYKYI

Specific function: Unknown

COG id: COG5011

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26906; Mature: 26906

Theoretical pI: Translated: 8.57; Mature: 8.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVRYLIKFTKDADIKFVSHLDLMRTIQRIVRRAELPVEYSKGFNPHMALAIAQPLSVGV
CCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCEEEEEECCCEEEE
YSEGDYLDLNLTEDMNEEAVKEKLNEFSANGIRFLEVSKSPVIHNVKRLPAAMALLDAAN
ECCCCEEEEECCCCCCHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCC
YTIKIRYNDISKAEEEVNALMAQKEIITIKRTKKGEKEADIKPFIKDFKCWTKDNYLIVN
EEEEEEECCHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCHHHHHHHHHHCCCCCEEEEE
TTISCGSRENLSADLLANVIKENTSNVNEEAFVEIKRVEMYAYKGNTLVPLYKYI
EEECCCCCCCCCHHHHHHHHHHCCCCCCHHHHEEEEEEEEEEECCCEEEEHHHCC
>Mature Secondary Structure
MKVRYLIKFTKDADIKFVSHLDLMRTIQRIVRRAELPVEYSKGFNPHMALAIAQPLSVGV
CCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCEEEEEECCCEEEE
YSEGDYLDLNLTEDMNEEAVKEKLNEFSANGIRFLEVSKSPVIHNVKRLPAAMALLDAAN
ECCCCEEEEECCCCCCHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCC
YTIKIRYNDISKAEEEVNALMAQKEIITIKRTKKGEKEADIKPFIKDFKCWTKDNYLIVN
EEEEEEECCHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCHHHHHHHHHHCCCCCEEEEE
TTISCGSRENLSADLLANVIKENTSNVNEEAFVEIKRVEMYAYKGNTLVPLYKYI
EEECCCCCCCCCHHHHHHHHHHCCCCCCHHHHEEEEEEEEEEECCCEEEEHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA