Click here to switch to the map view.

The map label for this gene is yqeI [H]

Identifier: 18311108

GI number: 18311108

Start: 2437954

End: 2438256

Strand: Reverse

Name: yqeI [H]

Synonym: CPE2126

Alternate gene names: 18311108

Gene position: 2438256-2437954 (Counterclockwise)

Preceding gene: 18311109

Following gene: 18311107

Centisome position: 80.43

GC content: 29.04

Gene sequence:

>303_bases
ATGATAACAACAAAACAAAGAGCATATTTAAGAGGATTAGGTGCTAAATTAACTCCTATATTTCAAATAGGTAAAAACGG
AATAGAAGATAACTTTTTAAAGCAAGTTGATGATGCTTTAGAAGCAAGAGAGATTTTAAAAATAAATGTTCTTGAAAATA
GTGGATTAGAGACAAGAGAAGCTTCAAATTTCATCTGTGAAAGATTAGGATGTGAAGGGGTTCAATCTATAGGAAACAAA
ATAGTTCTTTACAGAGCATCAAAAAATAATCCTAAGATAGAATTACCTAAAAAAGGGAAGTAA

Upstream 100 bases:

>100_bases
TATTCCATGAGTTAAGAGAAATGGGAATAGAAGATGGAGATATGGTAAGATTAAACGACTTTGAGTTTGAATACTTACTA
TAATTAATGGAGGATAAATA

Downstream 100 bases:

>100_bases
TATGAAAAAAATAGGAGTATTTGGTGGAACTTTTGACCCAATACACATAGGCCATATTTATATAGCTTATGAAGCCTATA
AAATATTAGAACTAGATGAA

Product: putative RNA-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 100; Mature: 100

Protein sequence:

>100_residues
MITTKQRAYLRGLGAKLTPIFQIGKNGIEDNFLKQVDDALEAREILKINVLENSGLETREASNFICERLGCEGVQSIGNK
IVLYRASKNNPKIELPKKGK

Sequences:

>Translated_100_residues
MITTKQRAYLRGLGAKLTPIFQIGKNGIEDNFLKQVDDALEAREILKINVLENSGLETREASNFICERLGCEGVQSIGNK
IVLYRASKNNPKIELPKKGK
>Mature_100_residues
MITTKQRAYLRGLGAKLTPIFQIGKNGIEDNFLKQVDDALEAREILKINVLENSGLETREASNFICERLGCEGVQSIGNK
IVLYRASKNNPKIELPKKGK

Specific function: Unknown

COG id: COG1534

COG function: function code J; Predicted RNA-binding protein containing KH domain, possibly ribosomal protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 CRM domain [H]

Homologues:

Organism=Escherichia coli, GI1789570, Length=100, Percent_Identity=36, Blast_Score=66, Evalue=5e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001890
- InterPro:   IPR017924
- ProDom:   PD010559 [H]

Pfam domain/function: PF01985 CRS1_YhbY [H]

EC number: NA

Molecular weight: Translated: 11160; Mature: 11160

Theoretical pI: Translated: 9.93; Mature: 9.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITTKQRAYLRGLGAKLTPIFQIGKNGIEDNFLKQVDDALEAREILKINVLENSGLETRE
CCCCHHHHHHHHCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHEEEEECCCCCCCHH
ASNFICERLGCEGVQSIGNKIVLYRASKNNPKIELPKKGK
HHHHHHHHHCCHHHHHCCCEEEEEEECCCCCEEECCCCCC
>Mature Secondary Structure
MITTKQRAYLRGLGAKLTPIFQIGKNGIEDNFLKQVDDALEAREILKINVLENSGLETRE
CCCCHHHHHHHHCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHEEEEECCCCCCCHH
ASNFICERLGCEGVQSIGNKIVLYRASKNNPKIELPKKGK
HHHHHHHHHCCHHHHHCCCEEEEEEECCCCCEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]