| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is modB [H]
Identifier: 18311066
GI number: 18311066
Start: 2391414
End: 2392070
Strand: Reverse
Name: modB [H]
Synonym: CPE2084
Alternate gene names: 18311066
Gene position: 2392070-2391414 (Counterclockwise)
Preceding gene: 18311067
Following gene: 18311065
Centisome position: 78.91
GC content: 27.25
Gene sequence:
>657_bases ATGATATGGGAAGCCTTATTAATATCCTTAAAAGTTGTATTAGTATCAGTGTTTTTAAGCTGCACTTTAGGAATATTACT TGGCTATTTTATGGTGGAAAAAAATTTTAAGTTTAAATACATTATTGAAACAATAATAATATTTCCTATGTTTTTACCTC CTTCTGCTGTAGGATATTTAATTCTTTTAATATTAGGCAAGAAGGGAGTAATAGGTGAATTTCTATATAATAATTTTGAT ATGAGTATTATATTTACTTGGATAGGTGCTGTTATAGTAGGAATAGTTGTTTCAATACCTATTATGTATCAGAGTTTAAA GACATCCTTACTTAGTGTTAATGAGGATGTGAAAAATGCTGCTAGGGAAATGGGCGCAATAAACTTTAAACTTTATAGAC TTATAAGTTTACCTCTTTCTAAAAAAGGATTATATACAGGTATTGTACTTAGTATAGCTAGAGTTTTTGGAGAATTTGGA GCTACTATTTTAGTTGCTGGGAATATTCAAGGAAAAACTCAAACAATACCTATGGCTATGTATTATGCTATTGAGAATGG CGATTCAGGTTTAGCAAATAAGATATTAATACTTATAGTTTTAATATCAGTGATTTTAACTTTTTCTTATAATAAAATAA TTAAGAGAATAAAATAG
Upstream 100 bases:
>100_bases ATAGTAAAAATAATAAAGAAGCAAAGAAGCTTATTGAGTACCTAAAAGGTGAAGAAAGCAAAAAGATATTTAGTGAGTAT GGTTTTGAGGTGACTAAAAA
Downstream 100 bases:
>100_bases AATTTTTAAAGTTTAGAGAAGAGGAGAGAGTAACATATATGGATAATAAACTTACTCATTTCGATAATAAAGGAAATGCA GTTATGGTAGATGTAAGCAA
Product: molybdate ABC transporter permease
Products: ADP; phosphate; MoO42- [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 218; Mature: 218
Protein sequence:
>218_residues MIWEALLISLKVVLVSVFLSCTLGILLGYFMVEKNFKFKYIIETIIIFPMFLPPSAVGYLILLILGKKGVIGEFLYNNFD MSIIFTWIGAVIVGIVVSIPIMYQSLKTSLLSVNEDVKNAAREMGAINFKLYRLISLPLSKKGLYTGIVLSIARVFGEFG ATILVAGNIQGKTQTIPMAMYYAIENGDSGLANKILILIVLISVILTFSYNKIIKRIK
Sequences:
>Translated_218_residues MIWEALLISLKVVLVSVFLSCTLGILLGYFMVEKNFKFKYIIETIIIFPMFLPPSAVGYLILLILGKKGVIGEFLYNNFD MSIIFTWIGAVIVGIVVSIPIMYQSLKTSLLSVNEDVKNAAREMGAINFKLYRLISLPLSKKGLYTGIVLSIARVFGEFG ATILVAGNIQGKTQTIPMAMYYAIENGDSGLANKILILIVLISVILTFSYNKIIKRIK >Mature_218_residues MIWEALLISLKVVLVSVFLSCTLGILLGYFMVEKNFKFKYIIETIIIFPMFLPPSAVGYLILLILGKKGVIGEFLYNNFD MSIIFTWIGAVIVGIVVSIPIMYQSLKTSLLSVNEDVKNAAREMGAINFKLYRLISLPLSKKGLYTGIVLSIARVFGEFG ATILVAGNIQGKTQTIPMAMYYAIENGDSGLANKILILIVLISVILTFSYNKIIKRIK
Specific function: could be part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG4149
COG function: function code P; ABC-type molybdate transport system, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1786980, Length=201, Percent_Identity=40.7960199004975, Blast_Score=144, Evalue=3e-36, Organism=Escherichia coli, GI87082099, Length=215, Percent_Identity=27.906976744186, Blast_Score=100, Evalue=8e-23, Organism=Escherichia coli, GI1788764, Length=210, Percent_Identity=27.6190476190476, Blast_Score=93, Evalue=2e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR011867 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 24203; Mature: 24203
Theoretical pI: Translated: 10.04; Mature: 10.04
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIWEALLISLKVVLVSVFLSCTLGILLGYFMVEKNFKFKYIIETIIIFPMFLPPSAVGYL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHH ILLILGKKGVIGEFLYNNFDMSIIFTWIGAVIVGIVVSIPIMYQSLKTSLLSVNEDVKNA HHHHHCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AREMGAINFKLYRLISLPLSKKGLYTGIVLSIARVFGEFGATILVAGNIQGKTQTIPMAM HHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCEEEHEEE YYAIENGDSGLANKILILIVLISVILTFSYNKIIKRIK EEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MIWEALLISLKVVLVSVFLSCTLGILLGYFMVEKNFKFKYIIETIIIFPMFLPPSAVGYL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHH ILLILGKKGVIGEFLYNNFDMSIIFTWIGAVIVGIVVSIPIMYQSLKTSLLSVNEDVKNA HHHHHCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AREMGAINFKLYRLISLPLSKKGLYTGIVLSIARVFGEFGATILVAGNIQGKTQTIPMAM HHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCEEEHEEE YYAIENGDSGLANKILILIVLISVILTFSYNKIIKRIK EEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; MoO42- [Periplasm]; H2O [C]
Specific reaction: ATP + MoO42- [Periplasm] + H2O = ADP + phosphate + MoO42- [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9639930; 9384377 [H]