Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

Click here to switch to the map view.

The map label for this gene is yqeY [H]

Identifier: 18311004

GI number: 18311004

Start: 2314789

End: 2315238

Strand: Reverse

Name: yqeY [H]

Synonym: CPE2022

Alternate gene names: 18311004

Gene position: 2315238-2314789 (Counterclockwise)

Preceding gene: 18311005

Following gene: 18311003

Centisome position: 76.37

GC content: 36.22

Gene sequence:

>450_bases
ATGCCAACTATTAAAGAAAGACTTCAAGAAGACTGGAAGCAGGCTTTAAAGGCTAAGGATAAGTTCAAGGCTGGAGTTTT
AAGTACTGCTAAGTCAGCAATACTTTTAGTCGAAAAGACTGACGGTGTTAAGCTTGAGGATGAACAGGTTATAGAAATAT
TAGCAAGAGAAATCAAGCAAAGAAGAGAAGCTGCGCTTGAATTCGAAAAGGGAAATAGACAGGATCTAGTTGATCAAAAC
AATAGTGAGATTGCAATCTTGTTAGATTACCTTCCTCAGCAGTTAAGTGAAGAAGAAATAAAAGATATCATAAAGCAAGC
AGCTGAAGAAGTGGGCGCAAATAGCATGAAAGACATGGGAAAAGTTATGTCAAAGGTTAGACCGCAAACAGTTGGTAGAG
CTGATGGTAAACTTGTAAGTCAATTAGTTAAAGAATATTTAAATAAGTAA

Upstream 100 bases:

>100_bases
GTAAAGAGAAAGAAAAAATCAGAAGCTGCAAGAAAGAGAAAATTCAAATAGTTTTTGGTTTAAATTTATAGAATAATTTC
TTTTGAAAGAAGGTATACAA

Downstream 100 bases:

>100_bases
GAGAGTTCATTAGAACTCTCTTTTATTTTTATAATTTTAAAAAGATATTCTATTAATAGTTAGAAGTTTTTAAAGAAAAT
TTTTTGAATTGTTTTAAAAG

Product: GatB/Yqey domain protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 149; Mature: 148

Protein sequence:

>149_residues
MPTIKERLQEDWKQALKAKDKFKAGVLSTAKSAILLVEKTDGVKLEDEQVIEILAREIKQRREAALEFEKGNRQDLVDQN
NSEIAILLDYLPQQLSEEEIKDIIKQAAEEVGANSMKDMGKVMSKVRPQTVGRADGKLVSQLVKEYLNK

Sequences:

>Translated_149_residues
MPTIKERLQEDWKQALKAKDKFKAGVLSTAKSAILLVEKTDGVKLEDEQVIEILAREIKQRREAALEFEKGNRQDLVDQN
NSEIAILLDYLPQQLSEEEIKDIIKQAAEEVGANSMKDMGKVMSKVRPQTVGRADGKLVSQLVKEYLNK
>Mature_148_residues
PTIKERLQEDWKQALKAKDKFKAGVLSTAKSAILLVEKTDGVKLEDEQVIEILAREIKQRREAALEFEKGNRQDLVDQNN
SEIAILLDYLPQQLSEEEIKDIIKQAAEEVGANSMKDMGKVMSKVRPQTVGRADGKLVSQLVKEYLNK

Specific function: Unknown

COG id: COG1610

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003789
- InterPro:   IPR023168
- InterPro:   IPR019004 [H]

Pfam domain/function: PF09424 YqeY [H]

EC number: NA

Molecular weight: Translated: 16866; Mature: 16734

Theoretical pI: Translated: 5.46; Mature: 5.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTIKERLQEDWKQALKAKDKFKAGVLSTAKSAILLVEKTDGVKLEDEQVIEILAREIKQ
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCHHHHHHHHHHHHHH
RREAALEFEKGNRQDLVDQNNSEIAILLDYLPQQLSEEEIKDIIKQAAEEVGANSMKDMG
HHHHHHHHCCCCCHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHH
KVMSKVRPQTVGRADGKLVSQLVKEYLNK
HHHHHHCHHHCCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure 
PTIKERLQEDWKQALKAKDKFKAGVLSTAKSAILLVEKTDGVKLEDEQVIEILAREIKQ
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCHHHHHHHHHHHHHH
RREAALEFEKGNRQDLVDQNNSEIAILLDYLPQQLSEEEIKDIIKQAAEEVGANSMKDMG
HHHHHHHHCCCCCHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHH
KVMSKVRPQTVGRADGKLVSQLVKEYLNK
HHHHHHCHHHCCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377; 9023197 [H]