Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is 18311003

Identifier: 18311003

GI number: 18311003

Start: 2314283

End: 2314564

Strand: Reverse

Name: 18311003

Synonym: CPE2021

Alternate gene names: NA

Gene position: 2314564-2314283 (Counterclockwise)

Preceding gene: 18311004

Following gene: 18311002

Centisome position: 76.35

GC content: 28.72

Gene sequence:

>282_bases
GTGGGTGATAAATTAAGACAAGTCACTAATAGAATTGCAGAGGAATTAGATTTACCTAAGGAGATAATAAATGGTGAGCC
TAAAATAGTTGTACACGGAAAAAGTGAAATTATTATAGAAAATCATAAGGGTATAGAGGTTTTTAAGGAAAATGAAATTA
AAATAAATAGCAATCTAGGTGTTATTATAATCGAAGGAACAAATTTAGAGATAAGATTTATAGGTACTGAAACTATTGCT
TTAACAGGAAGACTTAAGAATTTAAGTTTTGAGGAGGCATAA

Upstream 100 bases:

>100_bases
TGTATATGCCTTTTTATATTGCTTAGTTTTTTTATATAAGAATAAAAAAATATAAATTTTCATAGATTTAGTATGAAAAT
ATTTTATGGGAGGTATAGTT

Downstream 100 bases:

>100_bases
GATGAATTTGGAGTTTTTAAAAAAGGGACAAGTAAAGGTTGAAATAAAAACTTTTGATATAAATAAACTTTTAAATGTTT
TATGGAGAAATGGTATAAAT

Product: sporulation protein YqfC

Products: NA

Alternate protein names: YabP Family Protein

Number of amino acids: Translated: 93; Mature: 92

Protein sequence:

>93_residues
MGDKLRQVTNRIAEELDLPKEIINGEPKIVVHGKSEIIIENHKGIEVFKENEIKINSNLGVIIIEGTNLEIRFIGTETIA
LTGRLKNLSFEEA

Sequences:

>Translated_93_residues
MGDKLRQVTNRIAEELDLPKEIINGEPKIVVHGKSEIIIENHKGIEVFKENEIKINSNLGVIIIEGTNLEIRFIGTETIA
LTGRLKNLSFEEA
>Mature_92_residues
GDKLRQVTNRIAEELDLPKEIINGEPKIVVHGKSEIIIENHKGIEVFKENEIKINSNLGVIIIEGTNLEIRFIGTETIAL
TGRLKNLSFEEA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10436; Mature: 10305

Theoretical pI: Translated: 4.92; Mature: 4.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGDKLRQVTNRIAEELDLPKEIINGEPKIVVHGKSEIIIENHKGIEVFKENEIKINSNLG
CCHHHHHHHHHHHHHCCCCHHHHCCCCEEEEECCCEEEEECCCCEEEEECCCEEECCCCC
VIIIEGTNLEIRFIGTETIALTGRLKNLSFEEA
EEEEECCCEEEEEECCEEEEEEEEECCCCCCCC
>Mature Secondary Structure 
GDKLRQVTNRIAEELDLPKEIINGEPKIVVHGKSEIIIENHKGIEVFKENEIKINSNLG
CHHHHHHHHHHHHHCCCCHHHHCCCCEEEEECCCEEEEECCCCEEEEECCCEEECCCCC
VIIIEGTNLEIRFIGTETIALTGRLKNLSFEEA
EEEEECCCEEEEEECCEEEEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA