Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is yqfF [H]

Identifier: 18311001

GI number: 18311001

Start: 2311054

End: 2313108

Strand: Reverse

Name: yqfF [H]

Synonym: CPE2019

Alternate gene names: 18311001

Gene position: 2313108-2311054 (Counterclockwise)

Preceding gene: 18311002

Following gene: 18311000

Centisome position: 76.3

GC content: 29.83

Gene sequence:

>2055_bases
ATGGGGAAATTAAAGGAAAAAACATTTGATATATTTAAAGATTACAAAAAAATAATCTTATATATAATAACCTTTATAGT
TTTATACTGTACTTTGATGACTGGTATAATAACAAGAAAGTATGATTTAAAGGTAGGAGATATACCTAAGTCAGACATTA
AGGCACATAGAGAAATTATTGATGAATCAGCTACTGAAGCAAGAAAAAAAGAAGCTGAAGAAAAGGTTGATAAACAATAT
TCTCTAAGGACAGATGTTCAGAAGCAAAGTGAAGAAAAGATAAAGGGTTTCTTTTCTTCAGTTGAAAAAGTTTTAGCTCA
AGATAAGCCAGAAGAAGAAAAGGCTAAGCTTATTCCTAGAGCACCATTTAAAATAACAGATGCACAGGCAAATAAAATTG
CCTCAATGAATGAGCAAAGTACTAAGAAATTAGAAAGCGTATGCATAGATGGTCTAAATAAGGCATATGAGGCTCCAATT
GAAGATGGAAATGAGCAAGACTTAAAGGAAGCTAAAAAAGAATATACAGATTTTATATCTTCAAGTGATTTAAGTGATTC
AGAGAAGGCTATTGCATTAAATTTTGTTAATGTAGTAGAACCAAATTTTTTCTATGATAAAGAAAAAACTGATGAATTAA
TAAAAGAAACCTTAAAGCAAGTTCCACCAGTTATGATAAAGAAAAATCAAATAGTAGTAAGTGAAGGTGAGCCAGTTACA
GCGCACCAATTAGAACTTTTAGGAACTTTAGGCTTATTAAGCGATTCAGCTTCAGCGCTATATATTTATATTGCTCTAGG
GGTTTTAGTAATAATAGTTATGTATCTTCAATATGGATACATACATAAATATTATCCAGCTATAAATAAAGAGTTTTCCA
AAATAGTTATGATAAGCATATTAAATGTATTTCCAGTAATACTAGCTAGACTTTTTGGTATGATGTCAAATTATATAATA
CCACTGGCGTGTATGCCTATGCTTATAACGCTTCTACTAAATTATAAAATATCACTAGTATTTAGTATGTTAAATGTAAT
TTTAATAGGAGGGGCAGTAGGATTTAATCCTAATATAATAATCCTTGCTATTTTAAATGTTGTTTTAGGAGGAACATTGC
TTAGAAAAATGCAACAGAGAAATGATATATTATATTCTTCAATAACCGTTGCAGTTTTAAGTTCAATATTAACTTTTAGT
GTTGGTACTCTAACAACTAATAACTTTATGGAAATACTTGCAGATAGTACATTTGCAGCGGCAGGAGCCATACTTTCTGG
GATACTTACAATAGGTGTTTTACCATTTTTTGAGTCAACATTTGATATAGTAACTAATGCTAAATTATTAGAATTATCTA
ATCCTAATAATCCATTACTTAAAAAATTACTAATGGAGGCTCCAGGAACATATCATCATAGTATTTTAGTAGCAAACTTA
GCAGAGTTAGCTGCTGAGCAAGTAGGAGGAAATCCACTATTAGCTAGGATAGGAGCTTATTATCATGATGTGGGTAAAAC
TAAGAGACCATATTTCTTTAGAGAAAATCAGTTTGGAAAGAAAAATCCACATGATAGGTTAAAACCAGAAGTAAGTAGTA
AAATAATAATATCTCACGTTAAAGATGGATCAGAATTAGCCAAGGAATATAATTTACCTAAGACTATACATGATTTTATA
GTTACCCATCATGGAGAAACTTTAGTTAAATATTTTTATTTAACAGTAAAAAATAACTCTGAAAATCCAGATGAGGTTAA
GGAAGAGGATTTTAAATATCCAGGACCAAAACCTATGAGTAAAGAACAAGGAATTGTTATGCTAGCAGATTCAACAGAGG
CAGCTGTAAGATCAATTAATGAACCTACTGAAGAGAAAATTGAAAAAATGGTCAATAATATTATTGATGATAAGTTAGCA
TCTGGACAGCTAGACAATTGTGATCTTACTCTTAGAGATATAAGTAAGATAAAAAAATGTTTCCTAAAGGCATTAAATGG
AATACATCATGAAAGAATAGAATATCCAGATGATAACAAGAAGGAGAAAAAATAA

Upstream 100 bases:

>100_bases
GGAAGGGAAGATTAGATTAAAGGTTCTTTTCGTAGTAGAACAAAATATAGCTTTAAGTTACTAGATAAATTAGGACCTAA
TGAGGAGAAGATGAGTAATT

Downstream 100 bases:

>100_bases
AATGATATTCATAGATAATAGACAGAATAAATTTGATGTTACGGAAGAATTAACTACGAAGTTAGAAGAAGTTATTTCTT
TTGTGCTAAAAGAAGAAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 684; Mature: 683

Protein sequence:

>684_residues
MGKLKEKTFDIFKDYKKIILYIITFIVLYCTLMTGIITRKYDLKVGDIPKSDIKAHREIIDESATEARKKEAEEKVDKQY
SLRTDVQKQSEEKIKGFFSSVEKVLAQDKPEEEKAKLIPRAPFKITDAQANKIASMNEQSTKKLESVCIDGLNKAYEAPI
EDGNEQDLKEAKKEYTDFISSSDLSDSEKAIALNFVNVVEPNFFYDKEKTDELIKETLKQVPPVMIKKNQIVVSEGEPVT
AHQLELLGTLGLLSDSASALYIYIALGVLVIIVMYLQYGYIHKYYPAINKEFSKIVMISILNVFPVILARLFGMMSNYII
PLACMPMLITLLLNYKISLVFSMLNVILIGGAVGFNPNIIILAILNVVLGGTLLRKMQQRNDILYSSITVAVLSSILTFS
VGTLTTNNFMEILADSTFAAAGAILSGILTIGVLPFFESTFDIVTNAKLLELSNPNNPLLKKLLMEAPGTYHHSILVANL
AELAAEQVGGNPLLARIGAYYHDVGKTKRPYFFRENQFGKKNPHDRLKPEVSSKIIISHVKDGSELAKEYNLPKTIHDFI
VTHHGETLVKYFYLTVKNNSENPDEVKEEDFKYPGPKPMSKEQGIVMLADSTEAAVRSINEPTEEKIEKMVNNIIDDKLA
SGQLDNCDLTLRDISKIKKCFLKALNGIHHERIEYPDDNKKEKK

Sequences:

>Translated_684_residues
MGKLKEKTFDIFKDYKKIILYIITFIVLYCTLMTGIITRKYDLKVGDIPKSDIKAHREIIDESATEARKKEAEEKVDKQY
SLRTDVQKQSEEKIKGFFSSVEKVLAQDKPEEEKAKLIPRAPFKITDAQANKIASMNEQSTKKLESVCIDGLNKAYEAPI
EDGNEQDLKEAKKEYTDFISSSDLSDSEKAIALNFVNVVEPNFFYDKEKTDELIKETLKQVPPVMIKKNQIVVSEGEPVT
AHQLELLGTLGLLSDSASALYIYIALGVLVIIVMYLQYGYIHKYYPAINKEFSKIVMISILNVFPVILARLFGMMSNYII
PLACMPMLITLLLNYKISLVFSMLNVILIGGAVGFNPNIIILAILNVVLGGTLLRKMQQRNDILYSSITVAVLSSILTFS
VGTLTTNNFMEILADSTFAAAGAILSGILTIGVLPFFESTFDIVTNAKLLELSNPNNPLLKKLLMEAPGTYHHSILVANL
AELAAEQVGGNPLLARIGAYYHDVGKTKRPYFFRENQFGKKNPHDRLKPEVSSKIIISHVKDGSELAKEYNLPKTIHDFI
VTHHGETLVKYFYLTVKNNSENPDEVKEEDFKYPGPKPMSKEQGIVMLADSTEAAVRSINEPTEEKIEKMVNNIIDDKLA
SGQLDNCDLTLRDISKIKKCFLKALNGIHHERIEYPDDNKKEKK
>Mature_683_residues
GKLKEKTFDIFKDYKKIILYIITFIVLYCTLMTGIITRKYDLKVGDIPKSDIKAHREIIDESATEARKKEAEEKVDKQYS
LRTDVQKQSEEKIKGFFSSVEKVLAQDKPEEEKAKLIPRAPFKITDAQANKIASMNEQSTKKLESVCIDGLNKAYEAPIE
DGNEQDLKEAKKEYTDFISSSDLSDSEKAIALNFVNVVEPNFFYDKEKTDELIKETLKQVPPVMIKKNQIVVSEGEPVTA
HQLELLGTLGLLSDSASALYIYIALGVLVIIVMYLQYGYIHKYYPAINKEFSKIVMISILNVFPVILARLFGMMSNYIIP
LACMPMLITLLLNYKISLVFSMLNVILIGGAVGFNPNIIILAILNVVLGGTLLRKMQQRNDILYSSITVAVLSSILTFSV
GTLTTNNFMEILADSTFAAAGAILSGILTIGVLPFFESTFDIVTNAKLLELSNPNNPLLKKLLMEAPGTYHHSILVANLA
ELAAEQVGGNPLLARIGAYYHDVGKTKRPYFFRENQFGKKNPHDRLKPEVSSKIIISHVKDGSELAKEYNLPKTIHDFIV
THHGETLVKYFYLTVKNNSENPDEVKEEDFKYPGPKPMSKEQGIVMLADSTEAAVRSINEPTEEKIEKMVNNIIDDKLAS
GQLDNCDLTLRDISKIKKCFLKALNGIHHERIEYPDDNKKEKK

Specific function: Unknown

COG id: COG1480

COG function: function code R; Predicted membrane-associated HD superfamily hydrolase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011624
- InterPro:   IPR011621
- InterPro:   IPR003607
- InterPro:   IPR006675 [H]

Pfam domain/function: PF07698 7TM-7TMR_HD; PF07697 7TMR-HDED [H]

EC number: NA

Molecular weight: Translated: 76889; Mature: 76758

Theoretical pI: Translated: 6.85; Mature: 6.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKLKEKTFDIFKDYKKIILYIITFIVLYCTLMTGIITRKYDLKVGDIPKSDIKAHREII
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCHHHHHHHHHHH
DESATEARKKEAEEKVDKQYSLRTDVQKQSEEKIKGFFSSVEKVLAQDKPEEEKAKLIPR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCC
APFKITDAQANKIASMNEQSTKKLESVCIDGLNKAYEAPIEDGNEQDLKEAKKEYTDFIS
CCCEECCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHC
SSDLSDSEKAIALNFVNVVEPNFFYDKEKTDELIKETLKQVPPVMIKKNQIVVSEGEPVT
CCCCCCCCCEEEEEHHHHHCCCCCCCCHHHHHHHHHHHHHCCCEEEECCEEEEECCCCCH
AHQLELLGTLGLLSDSASALYIYIALGVLVIIVMYLQYGYIHKYYPAINKEFSKIVMISI
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LNVFPVILARLFGMMSNYIIPLACMPMLITLLLNYKISLVFSMLNVILIGGAVGFNPNII
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCH
ILAILNVVLGGTLLRKMQQRNDILYSSITVAVLSSILTFSVGTLTTNNFMEILADSTFAA
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHH
AGAILSGILTIGVLPFFESTFDIVTNAKLLELSNPNNPLLKKLLMEAPGTYHHSILVANL
HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHCCCCHHHHHHHHHH
AELAAEQVGGNPLLARIGAYYHDVGKTKRPYFFRENQFGKKNPHDRLKPEVSSKIIISHV
HHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCHHCCCCCCCHHHHHHC
KDGSELAKEYNLPKTIHDFIVTHHGETLVKYFYLTVKNNSENPDEVKEEDFKYPGPKPMS
CCHHHHHHHCCCCHHHHHHHHHCCCHHEEEEEEEEEECCCCCCHHHHHHCCCCCCCCCCC
KEQGIVMLADSTEAAVRSINEPTEEKIEKMVNNIIDDKLASGQLDNCDLTLRDISKIKKC
CCCCEEEEECCHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHH
FLKALNGIHHERIEYPDDNKKEKK
HHHHHCCHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
GKLKEKTFDIFKDYKKIILYIITFIVLYCTLMTGIITRKYDLKVGDIPKSDIKAHREII
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCHHHHHHHHHHH
DESATEARKKEAEEKVDKQYSLRTDVQKQSEEKIKGFFSSVEKVLAQDKPEEEKAKLIPR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCC
APFKITDAQANKIASMNEQSTKKLESVCIDGLNKAYEAPIEDGNEQDLKEAKKEYTDFIS
CCCEECCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHC
SSDLSDSEKAIALNFVNVVEPNFFYDKEKTDELIKETLKQVPPVMIKKNQIVVSEGEPVT
CCCCCCCCCEEEEEHHHHHCCCCCCCCHHHHHHHHHHHHHCCCEEEECCEEEEECCCCCH
AHQLELLGTLGLLSDSASALYIYIALGVLVIIVMYLQYGYIHKYYPAINKEFSKIVMISI
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LNVFPVILARLFGMMSNYIIPLACMPMLITLLLNYKISLVFSMLNVILIGGAVGFNPNII
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCH
ILAILNVVLGGTLLRKMQQRNDILYSSITVAVLSSILTFSVGTLTTNNFMEILADSTFAA
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHH
AGAILSGILTIGVLPFFESTFDIVTNAKLLELSNPNNPLLKKLLMEAPGTYHHSILVANL
HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHCCCCHHHHHHHHHH
AELAAEQVGGNPLLARIGAYYHDVGKTKRPYFFRENQFGKKNPHDRLKPEVSSKIIISHV
HHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCHHCCCCCCCHHHHHHC
KDGSELAKEYNLPKTIHDFIVTHHGETLVKYFYLTVKNNSENPDEVKEEDFKYPGPKPMS
CCHHHHHHHCCCCHHHHHHHHHCCCHHEEEEEEEEEECCCCCCHHHHHHCCCCCCCCCCC
KEQGIVMLADSTEAAVRSINEPTEEKIEKMVNNIIDDKLASGQLDNCDLTLRDISKIKKC
CCCCEEEEECCHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHH
FLKALNGIHHERIEYPDDNKKEKK
HHHHHCCHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]