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The map label for this gene is recO [H]

Identifier: 18310996

GI number: 18310996

Start: 2307726

End: 2308403

Strand: Reverse

Name: recO [H]

Synonym: CPE2014

Alternate gene names: 18310996

Gene position: 2308403-2307726 (Counterclockwise)

Preceding gene: 18310997

Following gene: 18310995

Centisome position: 76.15

GC content: 28.02

Gene sequence:

>678_bases
TTGCTTTGGATTTTTACCGAGAAAATGGGTAAGATAACAGCTATAGCTAAGGGTGCAAAGAAAAGTAAAAGTAAACTCTT
TTCATTAACGCACCCTTTATGCTATGGCGATTATTTATTATTCAAGGGAAAGGGTTTATATAGGTTATCTGAAGGAAAAA
TAAGAACTTCCTTTCAGACATCTTTAACTGACCTAGAAAAGCTTACTTATGCATCTTACTTATGTGAGCTTATTGATATA
TCACTACAGGATGAAGAAGAAAATTTTAATTTATATAAAGAGTTTATAACCTGTCTTTATTTAATAAATACAGAGGCTAT
AAGTTATGAACTATTAATAAGAGCTTTTGAGCTTAAATTATTAAAATACACTGGGTATGGATTAAGATTTGATAATTGTG
TGTTTTGTAAAAATAAATTAAGTGTTTCAAACTACATTAGTTTAAGATATTTTGGAGGCGTTTGTGATAAATGTCCCAAG
GAACATGGGCTTTACATAAATAAAGCCACATATAATGCCTTAAGATTCTTAAATAATACTTCTTTGGATAAAGTATATAG
ATTAACATTAACAGAAGAGGTTAAAGCAGAACTTTTTAAGGTTACTAGTTTTATAATATCTTCTGTATATTCAAGAAAAC
CTAAAAGTTTAGAAATGTTAAAGTTTATAAAGGAGTGA

Upstream 100 bases:

>100_bases
ATTAGGTTATAAAAAACTTAAATAGGAGGGATAGCTTCTGGCACTTATAGAGAGTGGTGGAGTTATCATTAAGGCTCAAG
ATTATAAAGAGAACGATAAA

Downstream 100 bases:

>100_bases
TTTACATGAGTGAAATAACATTAGAAAAAGTAGACCAGGTAATAGAGAGAACATATGCTACTTACGCAGAAGCTAAAGAG
GCATTAGAAGCTTGTGATGG

Product: DNA repair protein RecO

Products: NA

Alternate protein names: Recombination protein O [H]

Number of amino acids: Translated: 225; Mature: 225

Protein sequence:

>225_residues
MLWIFTEKMGKITAIAKGAKKSKSKLFSLTHPLCYGDYLLFKGKGLYRLSEGKIRTSFQTSLTDLEKLTYASYLCELIDI
SLQDEEENFNLYKEFITCLYLINTEAISYELLIRAFELKLLKYTGYGLRFDNCVFCKNKLSVSNYISLRYFGGVCDKCPK
EHGLYINKATYNALRFLNNTSLDKVYRLTLTEEVKAELFKVTSFIISSVYSRKPKSLEMLKFIKE

Sequences:

>Translated_225_residues
MLWIFTEKMGKITAIAKGAKKSKSKLFSLTHPLCYGDYLLFKGKGLYRLSEGKIRTSFQTSLTDLEKLTYASYLCELIDI
SLQDEEENFNLYKEFITCLYLINTEAISYELLIRAFELKLLKYTGYGLRFDNCVFCKNKLSVSNYISLRYFGGVCDKCPK
EHGLYINKATYNALRFLNNTSLDKVYRLTLTEEVKAELFKVTSFIISSVYSRKPKSLEMLKFIKE
>Mature_225_residues
MLWIFTEKMGKITAIAKGAKKSKSKLFSLTHPLCYGDYLLFKGKGLYRLSEGKIRTSFQTSLTDLEKLTYASYLCELIDI
SLQDEEENFNLYKEFITCLYLINTEAISYELLIRAFELKLLKYTGYGLRFDNCVFCKNKLSVSNYISLRYFGGVCDKCPK
EHGLYINKATYNALRFLNNTSLDKVYRLTLTEEVKAELFKVTSFIISSVYSRKPKSLEMLKFIKE

Specific function: Involved in DNA repair and recF pathway recombination [H]

COG id: COG1381

COG function: function code L; Recombinational DNA repair protein (RecF pathway)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recO family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001164
- InterPro:   IPR022572
- InterPro:   IPR016027
- InterPro:   IPR003717 [H]

Pfam domain/function: PF02565 RecO; PF11967 RecO_N [H]

EC number: NA

Molecular weight: Translated: 26127; Mature: 26127

Theoretical pI: Translated: 9.32; Mature: 9.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLWIFTEKMGKITAIAKGAKKSKSKLFSLTHPLCYGDYLLFKGKGLYRLSEGKIRTSFQT
CEEEEECCCCCCHHHHHCCHHHHHHHHHHCCCHHHCCEEEEECCCEEEECCCCEEEHHHH
SLTDLEKLTYASYLCELIDISLQDEEENFNLYKEFITCLYLINTEAISYELLIRAFELKL
HHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
LKYTGYGLRFDNCVFCKNKLSVSNYISLRYFGGVCDKCPKEHGLYINKATYNALRFLNNT
EEEECCCEEECCEEEECCCCCHHHEEEEEEECCHHHCCCHHCCEEEEHHHHHHHHHHCCC
SLDKVYRLTLTEEVKAELFKVTSFIISSVYSRKPKSLEMLKFIKE
CHHHEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCC
>Mature Secondary Structure
MLWIFTEKMGKITAIAKGAKKSKSKLFSLTHPLCYGDYLLFKGKGLYRLSEGKIRTSFQT
CEEEEECCCCCCHHHHHCCHHHHHHHHHHCCCHHHCCEEEEECCCEEEECCCCEEEHHHH
SLTDLEKLTYASYLCELIDISLQDEEENFNLYKEFITCLYLINTEAISYELLIRAFELKL
HHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
LKYTGYGLRFDNCVFCKNKLSVSNYISLRYFGGVCDKCPKEHGLYINKATYNALRFLNNT
EEEECCCEEECCEEEECCCCCHHHEEEEEEECCHHHCCCHHCCEEEEHHHHHHHHHHCCC
SLDKVYRLTLTEEVKAELFKVTSFIISSVYSRKPKSLEMLKFIKE
CHHHEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11792842 [H]