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The map label for this gene is yxaC [H]

Identifier: 18310963

GI number: 18310963

Start: 2268057

End: 2268767

Strand: Direct

Name: yxaC [H]

Synonym: CPE1981

Alternate gene names: 18310963

Gene position: 2268057-2268767 (Clockwise)

Preceding gene: 18310962

Following gene: 18310964

Centisome position: 74.82

GC content: 31.93

Gene sequence:

>711_bases
ATGAATAACCTTGTTAATAACCCTTTATTTGGAATTTTATTAACTCTTTTTGCATTTGAAATTGGTATGACCATATACAA
AAAGACTAAAATTCCACTACTAAACCCTTTATTAATAGCAATTGCTCTTGTAATTGCAGTTTTAGTTTCATGCCATATAA
GTTTTGAAACTTATAATATTGGTGGTAGTTTTATAAATGCATTTTTAGGACCTGCAACTGTAATTTTAGCAGTACCTTTA
TATAAACAGTTACAACTTTTAAAAAATCATTTTGTACCAATAATGACAGGAATAATAGTTGGAAGTTTTGCTTCTATGTG
CTGTGTTATAATAATGGGATATTTCTTAGGAGTAAATCATGAACTTATTGCTTCTTTAGTTCCTAAATCAGTTACTACAC
CAATCGGAGTTGAAGTAGCTAGCGGACTTGGTGGAATACCTTCAATCACAGTTATAGCAGTAATAATAACTGGTATCACA
GGTGCAATCATAGCTCCTATGGTATGTAAATTACTCAAGATTGAGCATGAAGTTGCTATGGGAGTTTCTATGGGAACAGC
TGCCCATGCCGTTGGAACTACTAAAGCTTTAGAAATTGGTGAAACTCATGGTGCTATGAGTTCATTATCTATAGGTGTTG
CTGGATTAATAACAGTTTTCCTTGCTCCACCAATATATATGATATCTGCATTAATATTAAAATTTGTCTAA

Upstream 100 bases:

>100_bases
ATTTGTATAGCCTCAACTTTTGTTGTAATAGGAGTTACAGGTTTAGTTGTTCAAGCTTTAATAAGAAGAAAAGAAAAAAA
ACTACTAGGAGATGAAGTTA

Downstream 100 bases:

>100_bases
ACAGTGATAAAATTTCACTGTTTTTTCTTTTTATGAGTATATTTTCTTAATTATAGAAATACTAAAAATATAAATCTATA
ATTAAGGAGAATTAAAATGA

Product: lrgB-like family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 236; Mature: 236

Protein sequence:

>236_residues
MNNLVNNPLFGILLTLFAFEIGMTIYKKTKIPLLNPLLIAIALVIAVLVSCHISFETYNIGGSFINAFLGPATVILAVPL
YKQLQLLKNHFVPIMTGIIVGSFASMCCVIIMGYFLGVNHELIASLVPKSVTTPIGVEVASGLGGIPSITVIAVIITGIT
GAIIAPMVCKLLKIEHEVAMGVSMGTAAHAVGTTKALEIGETHGAMSSLSIGVAGLITVFLAPPIYMISALILKFV

Sequences:

>Translated_236_residues
MNNLVNNPLFGILLTLFAFEIGMTIYKKTKIPLLNPLLIAIALVIAVLVSCHISFETYNIGGSFINAFLGPATVILAVPL
YKQLQLLKNHFVPIMTGIIVGSFASMCCVIIMGYFLGVNHELIASLVPKSVTTPIGVEVASGLGGIPSITVIAVIITGIT
GAIIAPMVCKLLKIEHEVAMGVSMGTAAHAVGTTKALEIGETHGAMSSLSIGVAGLITVFLAPPIYMISALILKFV
>Mature_236_residues
MNNLVNNPLFGILLTLFAFEIGMTIYKKTKIPLLNPLLIAIALVIAVLVSCHISFETYNIGGSFINAFLGPATVILAVPL
YKQLQLLKNHFVPIMTGIIVGSFASMCCVIIMGYFLGVNHELIASLVPKSVTTPIGVEVASGLGGIPSITVIAVIITGIT
GAIIAPMVCKLLKIEHEVAMGVSMGTAAHAVGTTKALEIGETHGAMSSLSIGVAGLITVFLAPPIYMISALILKFV

Specific function: Unknown

COG id: COG1346

COG function: function code M; Putative effector of murein hydrolase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yohK (E.coli)/ywbG (IPA-22R) (B.subtilis) family [H]

Homologues:

Organism=Escherichia coli, GI1788464, Length=220, Percent_Identity=37.7272727272727, Blast_Score=152, Evalue=1e-38,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007300 [H]

Pfam domain/function: PF04172 LrgB [H]

EC number: NA

Molecular weight: Translated: 24715; Mature: 24715

Theoretical pI: Translated: 8.33; Mature: 8.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNLVNNPLFGILLTLFAFEIGMTIYKKTKIPLLNPLLIAIALVIAVLVSCHISFETYNI
CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCEEEEEC
GGSFINAFLGPATVILAVPLYKQLQLLKNHFVPIMTGIIVGSFASMCCVIIMGYFLGVNH
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
ELIASLVPKSVTTPIGVEVASGLGGIPSITVIAVIITGITGAIIAPMVCKLLKIEHEVAM
HHHHHHHCHHCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GVSMGTAAHAVGTTKALEIGETHGAMSSLSIGVAGLITVFLAPPIYMISALILKFV
HHHHCHHHHHHCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCC
>Mature Secondary Structure
MNNLVNNPLFGILLTLFAFEIGMTIYKKTKIPLLNPLLIAIALVIAVLVSCHISFETYNI
CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCEEEEEC
GGSFINAFLGPATVILAVPLYKQLQLLKNHFVPIMTGIIVGSFASMCCVIIMGYFLGVNH
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
ELIASLVPKSVTTPIGVEVASGLGGIPSITVIAVIITGITGAIIAPMVCKLLKIEHEVAM
HHHHHHHCHHCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GVSMGTAAHAVGTTKALEIGETHGAMSSLSIGVAGLITVFLAPPIYMISALILKFV
HHHHCHHHHHHCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7584049; 9384377; 10568751 [H]