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The map label for this gene is yohJ [C]

Identifier: 18310962

GI number: 18310962

Start: 2267687

End: 2268064

Strand: Direct

Name: yohJ [C]

Synonym: CPE1980

Alternate gene names: 18310962

Gene position: 2267687-2268064 (Clockwise)

Preceding gene: 18310961

Following gene: 18310963

Centisome position: 74.81

GC content: 28.57

Gene sequence:

>378_bases
GTGAAGCTTTTAAGAGAAATGCTTATTGTAGTGTTTATATACTTCTTAGGCGAATTTATTTCTAAAAGTTTTATACATAG
TGTACCTGGAAATATTATTGGAATGTTAATATTATTAGTTTTACTATGTACTAAAGTTGTTAAAGTAGAATCTATTGACT
GTGTTGCTCAATTCTTCTTAGATCATTTAGCCTTCTTCTTCGTTCCTGCAGGGGTTGGACTTATGACATCTGTTGGATTA
TTAGAAGGAAATGTTCTTAAATTATTATTTATTTGTATAGCCTCAACTTTTGTTGTAATAGGAGTTACAGGTTTAGTTGT
TCAAGCTTTAATAAGAAGAAAAGAAAAAAAACTACTAGGAGATGAAGTTAATGAATAA

Upstream 100 bases:

>100_bases
TTTGATTATAGCTTTAATTTTAAATTCATTCTATAATGTATAAGGAACTTAAAAAATAGTTCCTTATATTTTTTGAATAA
AAAAAGGAAGTGATTATCTA

Downstream 100 bases:

>100_bases
CCTTGTTAATAACCCTTTATTTGGAATTTTATTAACTCTTTTTGCATTTGAAATTGGTATGACCATATACAAAAAGACTA
AAATTCCACTACTAAACCCT

Product: lrgA family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 125; Mature: 125

Protein sequence:

>125_residues
MKLLREMLIVVFIYFLGEFISKSFIHSVPGNIIGMLILLVLLCTKVVKVESIDCVAQFFLDHLAFFFVPAGVGLMTSVGL
LEGNVLKLLFICIASTFVVIGVTGLVVQALIRRKEKKLLGDEVNE

Sequences:

>Translated_125_residues
MKLLREMLIVVFIYFLGEFISKSFIHSVPGNIIGMLILLVLLCTKVVKVESIDCVAQFFLDHLAFFFVPAGVGLMTSVGL
LEGNVLKLLFICIASTFVVIGVTGLVVQALIRRKEKKLLGDEVNE
>Mature_125_residues
MKLLREMLIVVFIYFLGEFISKSFIHSVPGNIIGMLILLVLLCTKVVKVESIDCVAQFFLDHLAFFFVPAGVGLMTSVGL
LEGNVLKLLFICIASTFVVIGVTGLVVQALIRRKEKKLLGDEVNE

Specific function: Unknown

COG id: COG1380

COG function: function code R; Putative effector of murein hydrolase LrgA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0299 family [H]

Homologues:

Organism=Escherichia coli, GI1788463, Length=125, Percent_Identity=30.4, Blast_Score=59, Evalue=9e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005538
- InterPro:   IPR022957 [H]

Pfam domain/function: PF03788 LrgA [H]

EC number: NA

Molecular weight: Translated: 13816; Mature: 13816

Theoretical pI: Translated: 8.06; Mature: 8.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLLREMLIVVFIYFLGEFISKSFIHSVPGNIIGMLILLVLLCTKVVKVESIDCVAQFFL
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DHLAFFFVPAGVGLMTSVGLLEGNVLKLLFICIASTFVVIGVTGLVVQALIRRKEKKLLG
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
DEVNE
CCCCC
>Mature Secondary Structure
MKLLREMLIVVFIYFLGEFISKSFIHSVPGNIIGMLILLVLLCTKVVKVESIDCVAQFFL
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DHLAFFFVPAGVGLMTSVGLLEGNVLKLLFICIASTFVVIGVTGLVVQALIRRKEKKLLG
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
DEVNE
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA