| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is 18310957
Identifier: 18310957
GI number: 18310957
Start: 2262316
End: 2262882
Strand: Reverse
Name: 18310957
Synonym: CPE1975
Alternate gene names: NA
Gene position: 2262882-2262316 (Counterclockwise)
Preceding gene: 18310959
Following gene: 18310956
Centisome position: 74.65
GC content: 25.93
Gene sequence:
>567_bases ATGGCAGCTTTAACTGTAGATGATATTTTAAAAGAAAGTGAAGTTGGAACATTAATTCCACTAATAGTAGAAGTAAATGA TAAAGTAGTACCTATAATTTTTGTTAAAGATTATTTAGAAGCTTTAAAGGATATAGGTGATAATGTCTTAGTTGCCTTAA AAAGCAGCATTATAAGCAATAAAAAATTAGACTTGCTTTTAATTATGATTAGGTTTGACGAAAGAGAGGAAAATACCTAT GATCTATGGTTAAACTATGGATTTAATTGGCACTTTGACTTTTTAAATGGGTTAATTAACTTAGACAAAATACTTATAGA TTTTAGAGATGAAGACAACAATAGAATTAAGACTATTGAAGTTTGTAATACAGTTAAAAAGGATTTAGAAAAATACAAAG AGTCCTGTGAAGATTCTATTTTAATTAAAGAAGGAAAAGAAGAAAACATAATTAAAGTAGTAAAAAGAAAAAAATATGAA TCTTGGAACAATGAAGATGCTTTAGATTTAATTGATGAAGTATTAGATGATTATAGTAGCATACAAGATATGTGGGAGAA CTTATAA
Upstream 100 bases:
>100_bases AAAGAAAGAGATGTAAAGCTTTAATTGTGGTATTTACAATACATATCTTATATAATATAAGGTATTTGAAGCAATTAATT AATATTTAGGATGTGATAAT
Downstream 100 bases:
>100_bases TATAAGTAAAAATTTTAAAGTCAATAGGTAGAAGTAAAGATTTTGTTCATATAAAAACTTATAATTTAAGTAAAAAATTT ATCAAACTATAATATATATA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 188; Mature: 187
Protein sequence:
>188_residues MAALTVDDILKESEVGTLIPLIVEVNDKVVPIIFVKDYLEALKDIGDNVLVALKSSIISNKKLDLLLIMIRFDEREENTY DLWLNYGFNWHFDFLNGLINLDKILIDFRDEDNNRIKTIEVCNTVKKDLEKYKESCEDSILIKEGKEENIIKVVKRKKYE SWNNEDALDLIDEVLDDYSSIQDMWENL
Sequences:
>Translated_188_residues MAALTVDDILKESEVGTLIPLIVEVNDKVVPIIFVKDYLEALKDIGDNVLVALKSSIISNKKLDLLLIMIRFDEREENTY DLWLNYGFNWHFDFLNGLINLDKILIDFRDEDNNRIKTIEVCNTVKKDLEKYKESCEDSILIKEGKEENIIKVVKRKKYE SWNNEDALDLIDEVLDDYSSIQDMWENL >Mature_187_residues AALTVDDILKESEVGTLIPLIVEVNDKVVPIIFVKDYLEALKDIGDNVLVALKSSIISNKKLDLLLIMIRFDEREENTYD LWLNYGFNWHFDFLNGLINLDKILIDFRDEDNNRIKTIEVCNTVKKDLEKYKESCEDSILIKEGKEENIIKVVKRKKYES WNNEDALDLIDEVLDDYSSIQDMWENL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22007; Mature: 21876
Theoretical pI: Translated: 4.20; Mature: 4.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAALTVDDILKESEVGTLIPLIVEVNDKVVPIIFVKDYLEALKDIGDNVLVALKSSIISN CCCCCHHHHHHHCCCCCCEEEEEECCCCEEEEEEHHHHHHHHHHCCCHHHHHHHHHHHCC KKLDLLLIMIRFDEREENTYDLWLNYGFNWHFDFLNGLINLDKILIDFRDEDNNRIKTIE CCCEEEEEEEEECCCCCCEEEEEEECCCEEEHHHHHHHHHHHHHEEEECCCCCCCEEHHH VCNTVKKDLEKYKESCEDSILIKEGKEENIIKVVKRKKYESWNNEDALDLIDEVLDDYSS HHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH IQDMWENL HHHHHHCC >Mature Secondary Structure AALTVDDILKESEVGTLIPLIVEVNDKVVPIIFVKDYLEALKDIGDNVLVALKSSIISN CCCCHHHHHHHCCCCCCEEEEEECCCCEEEEEEHHHHHHHHHHCCCHHHHHHHHHHHCC KKLDLLLIMIRFDEREENTYDLWLNYGFNWHFDFLNGLINLDKILIDFRDEDNNRIKTIE CCCEEEEEEEEECCCCCCEEEEEEECCCEEEHHHHHHHHHHHHHEEEECCCCCCCEEHHH VCNTVKKDLEKYKESCEDSILIKEGKEENIIKVVKRKKYESWNNEDALDLIDEVLDDYSS HHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH IQDMWENL HHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA