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The map label for this gene is yebC [C]

Identifier: 18310936

GI number: 18310936

Start: 2242745

End: 2243482

Strand: Reverse

Name: yebC [C]

Synonym: CPE1954

Alternate gene names: 18310936

Gene position: 2243482-2242745 (Counterclockwise)

Preceding gene: 18310937

Following gene: 18310935

Centisome position: 74.01

GC content: 35.91

Gene sequence:

>738_bases
ATGTCAGGACATTCAAAGTGGCATAATATACAAGCTAAAAAAGGTAAAATGGATGCTAAAAGAGGAAAAATATTCACTAA
GATAGGAAAAGAGATAGCTGTTGCAGTTAAAGAAGGTGGAGCAAACTTAGATGGTAACTCAAGATTAAAGGATGCTGTAG
CAAAAGCTAAGGCTGCAAACATGCCAAATGATAACATTCAAAGAGCTATAAAGAAAGCTGCTGGAGAAGGAGATTCAGTA
AACTACGAATCAATAGTTTATGAAGGATACGGACCATCAGGAGTAGCTGTAATGGTTGAAGTATTAACAGATAATAAAAA
TAGATCAGCTGGTAATGTAAGAAGTGCTTTCACTAAAGGTGGCGGAAACATGGGTACATCAGGATGCGTTGGTTTCATGT
TCCAAAAGAAAGGTGAAATAGTAATAGAAAAAGCTGAGTTAGATGAAGATGAAATAATGATGATGGCTTTAGATGCTGGA
GCAGAAGATTTTGCATCAGAAGAAGAAGTATTCATAGTTACAACTTCACCAGAAGATTTTGGTACAGTAAGAGAAGCTTT
AGAAGCTGAAGGATTAGAATTCTTAGAAGCAGCAGTTAAAATGATACCAGATACTGAAACTGCTATAAATGAAGATGATG
CTAAGAAGTTCCAAAAAATGCTTGACTTACTTGAAGATGACGACGATGTTCAAGAGGTGTATCACAATGCTGAATTTCCT
GAAGGATGGGATGAATAA

Upstream 100 bases:

>100_bases
TTGAAGAGAAAAAATCTCTATGATATAATATTTAGGTGTTATTTCAAGATATTTAAAGAAATTTAAACTATAGTTCACAT
ATATGTTAGGAGGAATAAGG

Downstream 100 bases:

>100_bases
TATGTTTTAAGCATTTTAGAAAATCAAAAAAATAATAGATAATGATATATAAAAGTAAGAGAACACCCTTTTAATGTTAA
TATAAAATAATAATTTTATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 245; Mature: 244

Protein sequence:

>245_residues
MSGHSKWHNIQAKKGKMDAKRGKIFTKIGKEIAVAVKEGGANLDGNSRLKDAVAKAKAANMPNDNIQRAIKKAAGEGDSV
NYESIVYEGYGPSGVAVMVEVLTDNKNRSAGNVRSAFTKGGGNMGTSGCVGFMFQKKGEIVIEKAELDEDEIMMMALDAG
AEDFASEEEVFIVTTSPEDFGTVREALEAEGLEFLEAAVKMIPDTETAINEDDAKKFQKMLDLLEDDDDVQEVYHNAEFP
EGWDE

Sequences:

>Translated_245_residues
MSGHSKWHNIQAKKGKMDAKRGKIFTKIGKEIAVAVKEGGANLDGNSRLKDAVAKAKAANMPNDNIQRAIKKAAGEGDSV
NYESIVYEGYGPSGVAVMVEVLTDNKNRSAGNVRSAFTKGGGNMGTSGCVGFMFQKKGEIVIEKAELDEDEIMMMALDAG
AEDFASEEEVFIVTTSPEDFGTVREALEAEGLEFLEAAVKMIPDTETAINEDDAKKFQKMLDLLEDDDDVQEVYHNAEFP
EGWDE
>Mature_244_residues
SGHSKWHNIQAKKGKMDAKRGKIFTKIGKEIAVAVKEGGANLDGNSRLKDAVAKAKAANMPNDNIQRAIKKAAGEGDSVN
YESIVYEGYGPSGVAVMVEVLTDNKNRSAGNVRSAFTKGGGNMGTSGCVGFMFQKKGEIVIEKAELDEDEIMMMALDAGA
EDFASEEEVFIVTTSPEDFGTVREALEAEGLEFLEAAVKMIPDTETAINEDDAKKFQKMLDLLEDDDDVQEVYHNAEFPE
GWDE

Specific function: Unknown

COG id: COG0217

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TACO1 family

Homologues:

Organism=Homo sapiens, GI27545315, Length=247, Percent_Identity=31.1740890688259, Blast_Score=129, Evalue=2e-30,
Organism=Escherichia coli, GI1788171, Length=242, Percent_Identity=51.2396694214876, Blast_Score=241, Evalue=3e-65,
Organism=Escherichia coli, GI1788294, Length=232, Percent_Identity=39.2241379310345, Blast_Score=160, Evalue=7e-41,
Organism=Caenorhabditis elegans, GI17556100, Length=243, Percent_Identity=27.1604938271605, Blast_Score=89, Evalue=2e-18,
Organism=Saccharomyces cerevisiae, GI6321458, Length=264, Percent_Identity=35.2272727272727, Blast_Score=125, Evalue=5e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1922_CLOPS (Q0SRM5)

Other databases:

- EMBL:   CP000312
- RefSeq:   YP_699232.1
- ProteinModelPortal:   Q0SRM5
- SMR:   Q0SRM5
- STRING:   Q0SRM5
- GeneID:   4206317
- GenomeReviews:   CP000312_GR
- KEGG:   cpr:CPR_1922
- TIGR:   CPR_1922
- eggNOG:   COG0217
- HOGENOM:   HBG715231
- OMA:   VYANFDI
- ProtClustDB:   PRK00110
- BioCyc:   CPER289380:CPR_1922-MONOMER
- HAMAP:   MF_00693
- InterPro:   IPR002876
- InterPro:   IPR017856
- Gene3D:   G3DSA:1.10.10.200
- PANTHER:   PTHR12532
- TIGRFAMs:   TIGR01033

Pfam domain/function: PF01709 DUF28; SSF75625 DUF28

EC number: NA

Molecular weight: Translated: 26612; Mature: 26481

Theoretical pI: Translated: 4.33; Mature: 4.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGHSKWHNIQAKKGKMDAKRGKIFTKIGKEIAVAVKEGGANLDGNSRLKDAVAKAKAAN
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHEEEECCCCCCCCCCHHHHHHHHHHHHCC
MPNDNIQRAIKKAAGEGDSVNYESIVYEGYGPSGVAVMVEVLTDNKNRSAGNVRSAFTKG
CCCHHHHHHHHHHCCCCCCCCHHEEEEECCCCCCHHEEEEEHHCCCCCCCCHHHHHHHCC
GGNMGTSGCVGFMFQKKGEIVIEKAELDEDEIMMMALDAGAEDFASEEEVFIVTTSPEDF
CCCCCCCHHHHHEEECCCCEEEEECCCCCCCEEEEEECCCCHHHCCCCCEEEEECCCHHH
GTVREALEAEGLEFLEAAVKMIPDTETAINEDDAKKFQKMLDLLEDDDDVQEVYHNAEFP
HHHHHHHHHCCHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCC
EGWDE
CCCCC
>Mature Secondary Structure 
SGHSKWHNIQAKKGKMDAKRGKIFTKIGKEIAVAVKEGGANLDGNSRLKDAVAKAKAAN
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHEEEECCCCCCCCCCHHHHHHHHHHHHCC
MPNDNIQRAIKKAAGEGDSVNYESIVYEGYGPSGVAVMVEVLTDNKNRSAGNVRSAFTKG
CCCHHHHHHHHHHCCCCCCCCHHEEEEECCCCCCHHEEEEEHHCCCCCCCCHHHHHHHCC
GGNMGTSGCVGFMFQKKGEIVIEKAELDEDEIMMMALDAGAEDFASEEEVFIVTTSPEDF
CCCCCCCHHHHHEEECCCCEEEEECCCCCCCEEEEEECCCCHHHCCCCCEEEEECCCHHH
GTVREALEAEGLEFLEAAVKMIPDTETAINEDDAKKFQKMLDLLEDDDDVQEVYHNAEFP
HHHHHHHHHCCHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCC
EGWDE
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA