Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is yjjP [C]

Identifier: 18310912

GI number: 18310912

Start: 2211985

End: 2212755

Strand: Direct

Name: yjjP [C]

Synonym: CPE1930

Alternate gene names: 18310912

Gene position: 2211985-2212755 (Clockwise)

Preceding gene: 18310908

Following gene: 18310913

Centisome position: 72.97

GC content: 32.94

Gene sequence:

>771_bases
ATGGATTTTGACAAAGTATTACATATTGCAACTTTTGCAGGTAGAATAATACTAGAAAGCGGTGGAGAAACTTACAGAGT
TGAGGAAACTATTTGTAGAATCTGTGCAGCTTACGGTGTTAGATATGCTGAAAGTTTTGTTACCCCAACTGGAATTATGG
TTTCTGTTTACGATGAGAATAATTATACAACTACTTTAGTAAAAAGAGTTACTAATAGAACTGTTGATTTACAGAAAATC
CACTTGGTTAATGAACTTTCAAGAAAACTTTATACGGAAAAATATTCTCTTGATGAAGTTTTAGAAAAATTAATAGATAT
AAATGAAAACTGTCCTAAATACAATTTCAGAACAAATCTAGTATTTTCAGCCATAACAGCTGCTGGATTCACCACTATAT
TAGGAGGTAATATAGAAGACTGTGTAGTATCATTTTTTGTTGGAATGTTTGTAAAACTAGCTACTTTTAAGGCTGGCGAA
TTAGGAATAAACGCCTTTTTTATAAATACTCTAGGTGGAGCAATAGCTGCTCTCTTATCCTTAATAGCCTATAGCTTAGG
AGTTGGAAGCAATCTAGACACAATGATAATAGGTAGTATAATGCTATTAGTTCCTGGCTTATCTATTACAAATGCTATTA
GAGACACAATAGCTGGCGATTTAATATCAGGACTTATAAGGGCAGCTGAGGCCTTCTTGGTAGCTATTTCTATAGCTATT
GGAACTGGTATGATTATGAGTATTTGGATTTACTTTGGAGGTGGTATATAA

Upstream 100 bases:

>100_bases
TATATTTTGATTAAACTAATATGAATTTGTATAGATTATTTTAACTTTTCATATGTTATAATTACTATATTGGTTATAAA
TTTACACAGGGGAGAATAAT

Downstream 100 bases:

>100_bases
TTGGTTTTAATTAAAGAAGTTCTAGCTACCTTCATAGCTACTATAGCTTTTGGAGTATTATTTAATATTCACGGAAAGAA
TTTATTCTTTGCCGGAATAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 256; Mature: 256

Protein sequence:

>256_residues
MDFDKVLHIATFAGRIILESGGETYRVEETICRICAAYGVRYAESFVTPTGIMVSVYDENNYTTTLVKRVTNRTVDLQKI
HLVNELSRKLYTEKYSLDEVLEKLIDINENCPKYNFRTNLVFSAITAAGFTTILGGNIEDCVVSFFVGMFVKLATFKAGE
LGINAFFINTLGGAIAALLSLIAYSLGVGSNLDTMIIGSIMLLVPGLSITNAIRDTIAGDLISGLIRAAEAFLVAISIAI
GTGMIMSIWIYFGGGI

Sequences:

>Translated_256_residues
MDFDKVLHIATFAGRIILESGGETYRVEETICRICAAYGVRYAESFVTPTGIMVSVYDENNYTTTLVKRVTNRTVDLQKI
HLVNELSRKLYTEKYSLDEVLEKLIDINENCPKYNFRTNLVFSAITAAGFTTILGGNIEDCVVSFFVGMFVKLATFKAGE
LGINAFFINTLGGAIAALLSLIAYSLGVGSNLDTMIIGSIMLLVPGLSITNAIRDTIAGDLISGLIRAAEAFLVAISIAI
GTGMIMSIWIYFGGGI
>Mature_256_residues
MDFDKVLHIATFAGRIILESGGETYRVEETICRICAAYGVRYAESFVTPTGIMVSVYDENNYTTTLVKRVTNRTVDLQKI
HLVNELSRKLYTEKYSLDEVLEKLIDINENCPKYNFRTNLVFSAITAAGFTTILGGNIEDCVVSFFVGMFVKLATFKAGE
LGINAFFINTLGGAIAALLSLIAYSLGVGSNLDTMIIGSIMLLVPGLSITNAIRDTIAGDLISGLIRAAEAFLVAISIAI
GTGMIMSIWIYFGGGI

Specific function: Unknown

COG id: COG2966

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27775; Mature: 27775

Theoretical pI: Translated: 4.87; Mature: 4.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFDKVLHIATFAGRIILESGGETYRVEETICRICAAYGVRYAESFVTPTGIMVSVYDEN
CCHHHHHHHHHHHCEEEEECCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECC
NYTTTLVKRVTNRTVDLQKIHLVNELSRKLYTEKYSLDEVLEKLIDINENCPKYNFRTNL
CHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCHHHH
VFSAITAAGFTTILGGNIEDCVVSFFVGMFVKLATFKAGELGINAFFINTLGGAIAALLS
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH
LIAYSLGVGSNLDTMIIGSIMLLVPGLSITNAIRDTIAGDLISGLIRAAEAFLVAISIAI
HHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GTGMIMSIWIYFGGGI
HHHHHHHHHHHHCCCC
>Mature Secondary Structure
MDFDKVLHIATFAGRIILESGGETYRVEETICRICAAYGVRYAESFVTPTGIMVSVYDEN
CCHHHHHHHHHHHCEEEEECCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECC
NYTTTLVKRVTNRTVDLQKIHLVNELSRKLYTEKYSLDEVLEKLIDINENCPKYNFRTNL
CHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCHHHH
VFSAITAAGFTTILGGNIEDCVVSFFVGMFVKLATFKAGELGINAFFINTLGGAIAALLS
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH
LIAYSLGVGSNLDTMIIGSIMLLVPGLSITNAIRDTIAGDLISGLIRAAEAFLVAISIAI
HHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GTGMIMSIWIYFGGGI
HHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA