| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is yjjP [C]
Identifier: 18310912
GI number: 18310912
Start: 2211985
End: 2212755
Strand: Direct
Name: yjjP [C]
Synonym: CPE1930
Alternate gene names: 18310912
Gene position: 2211985-2212755 (Clockwise)
Preceding gene: 18310908
Following gene: 18310913
Centisome position: 72.97
GC content: 32.94
Gene sequence:
>771_bases ATGGATTTTGACAAAGTATTACATATTGCAACTTTTGCAGGTAGAATAATACTAGAAAGCGGTGGAGAAACTTACAGAGT TGAGGAAACTATTTGTAGAATCTGTGCAGCTTACGGTGTTAGATATGCTGAAAGTTTTGTTACCCCAACTGGAATTATGG TTTCTGTTTACGATGAGAATAATTATACAACTACTTTAGTAAAAAGAGTTACTAATAGAACTGTTGATTTACAGAAAATC CACTTGGTTAATGAACTTTCAAGAAAACTTTATACGGAAAAATATTCTCTTGATGAAGTTTTAGAAAAATTAATAGATAT AAATGAAAACTGTCCTAAATACAATTTCAGAACAAATCTAGTATTTTCAGCCATAACAGCTGCTGGATTCACCACTATAT TAGGAGGTAATATAGAAGACTGTGTAGTATCATTTTTTGTTGGAATGTTTGTAAAACTAGCTACTTTTAAGGCTGGCGAA TTAGGAATAAACGCCTTTTTTATAAATACTCTAGGTGGAGCAATAGCTGCTCTCTTATCCTTAATAGCCTATAGCTTAGG AGTTGGAAGCAATCTAGACACAATGATAATAGGTAGTATAATGCTATTAGTTCCTGGCTTATCTATTACAAATGCTATTA GAGACACAATAGCTGGCGATTTAATATCAGGACTTATAAGGGCAGCTGAGGCCTTCTTGGTAGCTATTTCTATAGCTATT GGAACTGGTATGATTATGAGTATTTGGATTTACTTTGGAGGTGGTATATAA
Upstream 100 bases:
>100_bases TATATTTTGATTAAACTAATATGAATTTGTATAGATTATTTTAACTTTTCATATGTTATAATTACTATATTGGTTATAAA TTTACACAGGGGAGAATAAT
Downstream 100 bases:
>100_bases TTGGTTTTAATTAAAGAAGTTCTAGCTACCTTCATAGCTACTATAGCTTTTGGAGTATTATTTAATATTCACGGAAAGAA TTTATTCTTTGCCGGAATAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 256; Mature: 256
Protein sequence:
>256_residues MDFDKVLHIATFAGRIILESGGETYRVEETICRICAAYGVRYAESFVTPTGIMVSVYDENNYTTTLVKRVTNRTVDLQKI HLVNELSRKLYTEKYSLDEVLEKLIDINENCPKYNFRTNLVFSAITAAGFTTILGGNIEDCVVSFFVGMFVKLATFKAGE LGINAFFINTLGGAIAALLSLIAYSLGVGSNLDTMIIGSIMLLVPGLSITNAIRDTIAGDLISGLIRAAEAFLVAISIAI GTGMIMSIWIYFGGGI
Sequences:
>Translated_256_residues MDFDKVLHIATFAGRIILESGGETYRVEETICRICAAYGVRYAESFVTPTGIMVSVYDENNYTTTLVKRVTNRTVDLQKI HLVNELSRKLYTEKYSLDEVLEKLIDINENCPKYNFRTNLVFSAITAAGFTTILGGNIEDCVVSFFVGMFVKLATFKAGE LGINAFFINTLGGAIAALLSLIAYSLGVGSNLDTMIIGSIMLLVPGLSITNAIRDTIAGDLISGLIRAAEAFLVAISIAI GTGMIMSIWIYFGGGI >Mature_256_residues MDFDKVLHIATFAGRIILESGGETYRVEETICRICAAYGVRYAESFVTPTGIMVSVYDENNYTTTLVKRVTNRTVDLQKI HLVNELSRKLYTEKYSLDEVLEKLIDINENCPKYNFRTNLVFSAITAAGFTTILGGNIEDCVVSFFVGMFVKLATFKAGE LGINAFFINTLGGAIAALLSLIAYSLGVGSNLDTMIIGSIMLLVPGLSITNAIRDTIAGDLISGLIRAAEAFLVAISIAI GTGMIMSIWIYFGGGI
Specific function: Unknown
COG id: COG2966
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27775; Mature: 27775
Theoretical pI: Translated: 4.87; Mature: 4.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDFDKVLHIATFAGRIILESGGETYRVEETICRICAAYGVRYAESFVTPTGIMVSVYDEN CCHHHHHHHHHHHCEEEEECCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECC NYTTTLVKRVTNRTVDLQKIHLVNELSRKLYTEKYSLDEVLEKLIDINENCPKYNFRTNL CHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCHHHH VFSAITAAGFTTILGGNIEDCVVSFFVGMFVKLATFKAGELGINAFFINTLGGAIAALLS HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH LIAYSLGVGSNLDTMIIGSIMLLVPGLSITNAIRDTIAGDLISGLIRAAEAFLVAISIAI HHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GTGMIMSIWIYFGGGI HHHHHHHHHHHHCCCC >Mature Secondary Structure MDFDKVLHIATFAGRIILESGGETYRVEETICRICAAYGVRYAESFVTPTGIMVSVYDEN CCHHHHHHHHHHHCEEEEECCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECC NYTTTLVKRVTNRTVDLQKIHLVNELSRKLYTEKYSLDEVLEKLIDINENCPKYNFRTNL CHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCHHHH VFSAITAAGFTTILGGNIEDCVVSFFVGMFVKLATFKAGELGINAFFINTLGGAIAALLS HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH LIAYSLGVGSNLDTMIIGSIMLLVPGLSITNAIRDTIAGDLISGLIRAAEAFLVAISIAI HHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GTGMIMSIWIYFGGGI HHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA