| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is manB [H]
Identifier: 18310855
GI number: 18310855
Start: 2143173
End: 2144900
Strand: Reverse
Name: manB [H]
Synonym: CPE1873
Alternate gene names: 18310855
Gene position: 2144900-2143173 (Counterclockwise)
Preceding gene: 18310856
Following gene: 18310854
Centisome position: 70.76
GC content: 29.51
Gene sequence:
>1728_bases GTGTATAGAGAAAAATATGAAGAATGGCTAAATTCTGATATTATTTCTGAGGAAATAAAGGCGGAATTAAGAGACGTAAA AGAAGATAAGGAAATAGAAGATAGATTTTATAAGGAATTAGATTTTGGTACTGGTGGATTAAGAGGTGTTATTGGTGCTG GGACTAATAGAATGAATATCTATACTGTAGGAAAAGCTACTCAAGGATTTGCAGATTATTTAAATGATAATTATGCGGGG GAAAAATCTGTTGCAATAGCTTATGACTCAAGAAATATGTCTAAGGAGTTTGCAAAAGCGGCTGCTTTAACTCTTTGTGC AAATGGAATAAAGGTTAATCTTTTTGAATCTTTAAGACCAACTCCAATGTTATCCTTTGCAGTAAGAGAATTAAATTGTA AGGGTGGTATTGTTATAACAGCATCACATAATCCAAAACAATATAATGGATATAAAGTTTATGGAGATGATGGATGTCAA TTAACAGATGCTCCTGCAAAAGCTGTTATTGGATATGTTAACAAAGTTACAGATTACGCAAACATAAAGACAATGAGTGA AGAAAAGGCTTTAGAAGAAGGTCTTTTAGTTTATATTGGTGAAGAAATAGATAAAAAATATATAGATGATTTAAAAACTT TAACTATAAGAGAAGATTTAGTTAAGAAGCATGCTAAAGATTTAAAAATAATTTATACTCCAATTCATGGTTCAGGAAAT GTTCCTGTAAGAAGAATATTAAAAGAGTTAGGATATGAGAATGTATTTGTTGTTAAAGAACAAGAAATGCCAGATGGAAA TTTCCCAACAGCTCCATATCCAAATCCAGAAGATCCAAAGGTATTTAAATTAGCTTTAGACATGGCTAAAGAAATTCAAC CTGATATAATATTTGGAACAGATCCAGACTGTGATAGAATAGGTGTTGTTGTTAAAGACAATAATGGAGAGTACCAAGTA TTAAGTGGTAACCAAACAGGAATGTTACTAACTAACTATATATTAAGTTCATTAAAGGAAATGAATAAATTACCTGAAAA TGGTGCAGTTATAAAAACTATAGTTACTACAGAGTCAGTAAGAAAAATGACTGAGGAATATGGGGTAACTTTAATAGATA CATTAACAGGATTTAAATATATAGGTGAAAAGATAAGAGAATTTGAAGAATCAGGTTCAAATGAATATTTATTTGGTTTT GAAGAAAGCTATGGTTACTTAGCTGGAACTTTTGCTAGAGATAAGGATGCTGTTGTAGCTTCAATGTTAATAGCTGAAAT GACTTTATATTATAAAGAACAAGGAAAAACTCTTTATGATGGTTTAATAGAACTTTATAATAAATATGGTTACTTCAAAG AAAGCTTAGTATCAATAGAGCTTGCAGGAAAAGAAGGACAAGAACAAATAGCTAAGTGTATAGATGGCTTAAGAAATGAT GCTTTAAAAGAAATGAACGGAGTTAAAGTTATTACATCTTTCGATTATAAGTTAAGCAAAGAATTAAATAACTTAACTGG AGAAGAAAAAGAAATCAAACTTCCAAAATCAAATGTTTTAAAATATGTTTTAGAAGATGATTCTTGGTTTGTTGTAAGAC CATCAGGTACAGAGCCTAAGATGAAAATCTACTTATCAGTAAAAGGTTCAAGTTTAGAAGATTCAAAAGAAAAAACTGAA AACTTTAAAAATGCAATAATGGAAGTAATTAATGCTAAATTAAAATAG
Upstream 100 bases:
>100_bases TTTTACTTTTTTTTGTTTTCAAATTTCAAAATATTGTAGTATAATATCTGTGAAAATAAAATATAAAATCCTTATAGAGA TTTAAAGGGGAGATAGTGCA
Downstream 100 bases:
>100_bases TTTAAGTTAAACAAAGAGCTATGTTAATATAACTTATATAAAACTTATAAGTTATAAATATAGCTCTTTTTATATTTTTA GAGCTTAATGCACAAAAGAG
Product: phosphomannomutase
Products: NA
Alternate protein names: PGM; Alpha-phosphoglucomutase; Glucose phosphomutase [H]
Number of amino acids: Translated: 575; Mature: 575
Protein sequence:
>575_residues MYREKYEEWLNSDIISEEIKAELRDVKEDKEIEDRFYKELDFGTGGLRGVIGAGTNRMNIYTVGKATQGFADYLNDNYAG EKSVAIAYDSRNMSKEFAKAAALTLCANGIKVNLFESLRPTPMLSFAVRELNCKGGIVITASHNPKQYNGYKVYGDDGCQ LTDAPAKAVIGYVNKVTDYANIKTMSEEKALEEGLLVYIGEEIDKKYIDDLKTLTIREDLVKKHAKDLKIIYTPIHGSGN VPVRRILKELGYENVFVVKEQEMPDGNFPTAPYPNPEDPKVFKLALDMAKEIQPDIIFGTDPDCDRIGVVVKDNNGEYQV LSGNQTGMLLTNYILSSLKEMNKLPENGAVIKTIVTTESVRKMTEEYGVTLIDTLTGFKYIGEKIREFEESGSNEYLFGF EESYGYLAGTFARDKDAVVASMLIAEMTLYYKEQGKTLYDGLIELYNKYGYFKESLVSIELAGKEGQEQIAKCIDGLRND ALKEMNGVKVITSFDYKLSKELNNLTGEEKEIKLPKSNVLKYVLEDDSWFVVRPSGTEPKMKIYLSVKGSSLEDSKEKTE NFKNAIMEVINAKLK
Sequences:
>Translated_575_residues MYREKYEEWLNSDIISEEIKAELRDVKEDKEIEDRFYKELDFGTGGLRGVIGAGTNRMNIYTVGKATQGFADYLNDNYAG EKSVAIAYDSRNMSKEFAKAAALTLCANGIKVNLFESLRPTPMLSFAVRELNCKGGIVITASHNPKQYNGYKVYGDDGCQ LTDAPAKAVIGYVNKVTDYANIKTMSEEKALEEGLLVYIGEEIDKKYIDDLKTLTIREDLVKKHAKDLKIIYTPIHGSGN VPVRRILKELGYENVFVVKEQEMPDGNFPTAPYPNPEDPKVFKLALDMAKEIQPDIIFGTDPDCDRIGVVVKDNNGEYQV LSGNQTGMLLTNYILSSLKEMNKLPENGAVIKTIVTTESVRKMTEEYGVTLIDTLTGFKYIGEKIREFEESGSNEYLFGF EESYGYLAGTFARDKDAVVASMLIAEMTLYYKEQGKTLYDGLIELYNKYGYFKESLVSIELAGKEGQEQIAKCIDGLRND ALKEMNGVKVITSFDYKLSKELNNLTGEEKEIKLPKSNVLKYVLEDDSWFVVRPSGTEPKMKIYLSVKGSSLEDSKEKTE NFKNAIMEVINAKLK >Mature_575_residues MYREKYEEWLNSDIISEEIKAELRDVKEDKEIEDRFYKELDFGTGGLRGVIGAGTNRMNIYTVGKATQGFADYLNDNYAG EKSVAIAYDSRNMSKEFAKAAALTLCANGIKVNLFESLRPTPMLSFAVRELNCKGGIVITASHNPKQYNGYKVYGDDGCQ LTDAPAKAVIGYVNKVTDYANIKTMSEEKALEEGLLVYIGEEIDKKYIDDLKTLTIREDLVKKHAKDLKIIYTPIHGSGN VPVRRILKELGYENVFVVKEQEMPDGNFPTAPYPNPEDPKVFKLALDMAKEIQPDIIFGTDPDCDRIGVVVKDNNGEYQV LSGNQTGMLLTNYILSSLKEMNKLPENGAVIKTIVTTESVRKMTEEYGVTLIDTLTGFKYIGEKIREFEESGSNEYLFGF EESYGYLAGTFARDKDAVVASMLIAEMTLYYKEQGKTLYDGLIELYNKYGYFKESLVSIELAGKEGQEQIAKCIDGLRND ALKEMNGVKVITSFDYKLSKELNNLTGEEKEIKLPKSNVLKYVLEDDSWFVVRPSGTEPKMKIYLSVKGSSLEDSKEKTE NFKNAIMEVINAKLK
Specific function: Catalyzes the interconversion between glucose-6- phosphate and alpha-glucose-1-phosphate. This is the first step in the biosynthesis of diglucosyl-diacylglycerol (Glc2-DAG), i.e. the predominant glycolipid found in B.subtilis membrane, which is also used
COG id: COG1109
COG function: function code G; Phosphomannomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphohexose mutase family [H]
Homologues:
Organism=Homo sapiens, GI63055049, Length=558, Percent_Identity=32.078853046595, Blast_Score=272, Evalue=5e-73, Organism=Homo sapiens, GI31377548, Length=568, Percent_Identity=31.6901408450704, Blast_Score=249, Evalue=4e-66, Organism=Caenorhabditis elegans, GI71993870, Length=553, Percent_Identity=32.5497287522604, Blast_Score=246, Evalue=3e-65, Organism=Caenorhabditis elegans, GI71993878, Length=310, Percent_Identity=33.8709677419355, Blast_Score=158, Evalue=8e-39, Organism=Saccharomyces cerevisiae, GI6323934, Length=441, Percent_Identity=34.2403628117914, Blast_Score=243, Evalue=6e-65, Organism=Drosophila melanogaster, GI20129809, Length=593, Percent_Identity=30.35413153457, Blast_Score=249, Evalue=3e-66, Organism=Drosophila melanogaster, GI24651977, Length=464, Percent_Identity=31.6810344827586, Blast_Score=234, Evalue=2e-61, Organism=Drosophila melanogaster, GI24653722, Length=486, Percent_Identity=32.3045267489712, Blast_Score=227, Evalue=2e-59,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005844 - InterPro: IPR016055 - InterPro: IPR005845 - InterPro: IPR005846 - InterPro: IPR005843 - InterPro: IPR016066 - InterPro: IPR005841 [H]
Pfam domain/function: PF02878 PGM_PMM_I; PF02879 PGM_PMM_II; PF02880 PGM_PMM_III; PF00408 PGM_PMM_IV [H]
EC number: =5.4.2.2 [H]
Molecular weight: Translated: 64704; Mature: 64704
Theoretical pI: Translated: 4.78; Mature: 4.78
Prosite motif: PS00710 PGM_PMM
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYREKYEEWLNSDIISEEIKAELRDVKEDKEIEDRFYKELDFGTGGLRGVIGAGTNRMNI CCHHHHHHHHCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCEEEECCCCEEEE YTVGKATQGFADYLNDNYAGEKSVAIAYDSRNMSKEFAKAAALTLCANGIKVNLFESLRP EEECCCCHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCEEEEEHHCCC TPMLSFAVRELNCKGGIVITASHNPKQYNGYKVYGDDGCQLTDAPAKAVIGYVNKVTDYA CHHHHHHHHHCCCCCCEEEEECCCCCCCCCEEEECCCCCEECCCHHHHHHHHHHHHHHHH NIKTMSEEKALEEGLLVYIGEEIDKKYIDDLKTLTIREDLVKKHAKDLKIIYTPIHGSGN HHECCHHHHHHHCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCC VPVRRILKELGYENVFVVKEQEMPDGNFPTAPYPNPEDPKVFKLALDMAKEIQPDIIFGT CHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEECC DPDCDRIGVVVKDNNGEYQVLSGNQTGMLLTNYILSSLKEMNKLPENGAVIKTIVTTESV CCCCCCEEEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECHHHH RKMTEEYGVTLIDTLTGFKYIGEKIREFEESGSNEYLFGFEESYGYLAGTFARDKDAVVA HHHHHHHCCEEEHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCEEEECCCCHHHHHH SMLIAEMTLYYKEQGKTLYDGLIELYNKYGYFKESLVSIELAGKEGQEQIAKCIDGLRND HHHHHHHHHHHHHCCCCHHHHHHHHHHHHCHHHHHEEEEEECCCCCHHHHHHHHHHHHHH ALKEMNGVKVITSFDYKLSKELNNLTGEEKEIKLPKSNVLKYVLEDDSWFVVRPSGTEPK HHHHCCCEEEEEECCHHHHHHHHHCCCCCCEEECCHHHHEEEEEECCCEEEEECCCCCCC MKIYLSVKGSSLEDSKEKTENFKNAIMEVINAKLK EEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MYREKYEEWLNSDIISEEIKAELRDVKEDKEIEDRFYKELDFGTGGLRGVIGAGTNRMNI CCHHHHHHHHCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCEEEECCCCEEEE YTVGKATQGFADYLNDNYAGEKSVAIAYDSRNMSKEFAKAAALTLCANGIKVNLFESLRP EEECCCCHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCEEEEEHHCCC TPMLSFAVRELNCKGGIVITASHNPKQYNGYKVYGDDGCQLTDAPAKAVIGYVNKVTDYA CHHHHHHHHHCCCCCCEEEEECCCCCCCCCEEEECCCCCEECCCHHHHHHHHHHHHHHHH NIKTMSEEKALEEGLLVYIGEEIDKKYIDDLKTLTIREDLVKKHAKDLKIIYTPIHGSGN HHECCHHHHHHHCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCC VPVRRILKELGYENVFVVKEQEMPDGNFPTAPYPNPEDPKVFKLALDMAKEIQPDIIFGT CHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEECC DPDCDRIGVVVKDNNGEYQVLSGNQTGMLLTNYILSSLKEMNKLPENGAVIKTIVTTESV CCCCCCEEEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECHHHH RKMTEEYGVTLIDTLTGFKYIGEKIREFEESGSNEYLFGFEESYGYLAGTFARDKDAVVA HHHHHHHCCEEEHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCEEEECCCCHHHHHH SMLIAEMTLYYKEQGKTLYDGLIELYNKYGYFKESLVSIELAGKEGQEQIAKCIDGLRND HHHHHHHHHHHHHCCCCHHHHHHHHHHHHCHHHHHEEEEEECCCCCHHHHHHHHHHHHHH ALKEMNGVKVITSFDYKLSKELNNLTGEEKEIKLPKSNVLKYVLEDDSWFVVRPSGTEPK HHHHCCCEEEEEECCHHHHHHHHHCCCCCCEEECCHHHHEEEEEECCCEEEEECCCCCCC MKIYLSVKGSSLEDSKEKTENFKNAIMEVINAKLK EEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9579061; 9384377; 2127799 [H]