Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is divIVA [H]

Identifier: 18310833

GI number: 18310833

Start: 2122025

End: 2122651

Strand: Reverse

Name: divIVA [H]

Synonym: CPE1851

Alternate gene names: 18310833

Gene position: 2122651-2122025 (Counterclockwise)

Preceding gene: 18310834

Following gene: 18310832

Centisome position: 70.02

GC content: 30.78

Gene sequence:

>627_bases
ATGAAATTAACCCCAATGGATATTAACAACAAGGAGTTCAAAAGGGTTTTAAGAGGTTATTGTCCAGAGGAAGTAGATGA
ATTCTTAGACCAAATAGTCGAAGAATATGAGATTCTTTTTAAAGAAAACACTGCTTTAAAAGAGAAACTTGAAAATTCTA
ACGATAAGATAGAGCATTATAGTAAAATTGAGAATACAATTCAAAACACTTTATTATTAGCTCAAAATACAGCTGAGCAA
GCAAAAGCTAATGCTCAAAAGGAAGCCGATGTAATAATCAAGAGTGCTAATGACACAGCTCAAAGAATATTAGATAAGGC
TCACAATGATGTTATACAAATCAATGATGAGTATGACAGAGTTAAACAAGAGTTTACAAAGTTTAGAGCTAAGTTTAGAA
GCTTTATGAACTTCCAAATAGATACTTTTGATGATTTAGAGAAAGATTTTATTAAGAATTTTAACATAACTAAGCCAGAG
GATCAAACTGAAACAGAAGAACCACAGGGCATACAGATTGATTTTGAAGAAGAGAAAGAAGAAAAAACTGAGCTTAAAGA
CATCTATGAAGTGGAAACACATTTTGATGATGTAAATGAAATTAAAAGCTTCTTTGCTGAAGAGTAA

Upstream 100 bases:

>100_bases
AAGAGGTATTGGAAAGTTTAAAATAAGTAATATTTTTGGGACAACGAAGAGTGGTAGATTAAAATTGACAGTATTTAAGT
ATACATAGGAGTGTGATTAT

Downstream 100 bases:

>100_bases
AGAGCTATTAAAAAATCTCACTTTGATTAAGGTGAGATTTTTCTTTTTGTTTAATTAATTGTTGAAATTTAATATTTTAT
TATATAATATTTAAGATATA

Product: cell-division initiation protein

Products: NA

Alternate protein names: Cell division initiation protein divIVA; Minicell-associated protein divIVA [H]

Number of amino acids: Translated: 208; Mature: 208

Protein sequence:

>208_residues
MKLTPMDINNKEFKRVLRGYCPEEVDEFLDQIVEEYEILFKENTALKEKLENSNDKIEHYSKIENTIQNTLLLAQNTAEQ
AKANAQKEADVIIKSANDTAQRILDKAHNDVIQINDEYDRVKQEFTKFRAKFRSFMNFQIDTFDDLEKDFIKNFNITKPE
DQTETEEPQGIQIDFEEEKEEKTELKDIYEVETHFDDVNEIKSFFAEE

Sequences:

>Translated_208_residues
MKLTPMDINNKEFKRVLRGYCPEEVDEFLDQIVEEYEILFKENTALKEKLENSNDKIEHYSKIENTIQNTLLLAQNTAEQ
AKANAQKEADVIIKSANDTAQRILDKAHNDVIQINDEYDRVKQEFTKFRAKFRSFMNFQIDTFDDLEKDFIKNFNITKPE
DQTETEEPQGIQIDFEEEKEEKTELKDIYEVETHFDDVNEIKSFFAEE
>Mature_208_residues
MKLTPMDINNKEFKRVLRGYCPEEVDEFLDQIVEEYEILFKENTALKEKLENSNDKIEHYSKIENTIQNTLLLAQNTAEQ
AKANAQKEADVIIKSANDTAQRILDKAHNDVIQINDEYDRVKQEFTKFRAKFRSFMNFQIDTFDDLEKDFIKNFNITKPE
DQTETEEPQGIQIDFEEEKEEKTELKDIYEVETHFDDVNEIKSFFAEE

Specific function: May act as a pilot protein, directing minCD to the polar septation sites or by inhibiting minCD at the midcell site of division. Required for polar localization of the chromosome during sporulation [H]

COG id: COG3599

COG function: function code D; Cell division initiation protein

Gene ontology:

Cell location: Cytoplasm. Note=Localized at the cell division site and found exclusively at the cell pole during sporulation [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gpsB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007793
- InterPro:   IPR019933 [H]

Pfam domain/function: PF05103 DivIVA [H]

EC number: NA

Molecular weight: Translated: 24682; Mature: 24682

Theoretical pI: Translated: 4.22; Mature: 4.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLTPMDINNKEFKRVLRGYCPEEVDEFLDQIVEEYEILFKENTALKEKLENSNDKIEHY
CCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHH
SKIENTIQNTLLLAQNTAEQAKANAQKEADVIIKSANDTAQRILDKAHNDVIQINDEYDR
HHHHHHHHHHHHHHHCHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHCCCEEEECCHHHH
VKQEFTKFRAKFRSFMNFQIDTFDDLEKDFIKNFNITKPEDQTETEEPQGIQIDFEEEKE
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEECCHHHHH
EKTELKDIYEVETHFDDVNEIKSFFAEE
HHHHHHHHHHHHHHHCCHHHHHHHHCCC
>Mature Secondary Structure
MKLTPMDINNKEFKRVLRGYCPEEVDEFLDQIVEEYEILFKENTALKEKLENSNDKIEHY
CCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHH
SKIENTIQNTLLLAQNTAEQAKANAQKEADVIIKSANDTAQRILDKAHNDVIQINDEYDR
HHHHHHHHHHHHHHHCHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHCCCEEEECCHHHH
VKQEFTKFRAKFRSFMNFQIDTFDDLEKDFIKNFNITKPEDQTETEEPQGIQIDFEEEKE
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEECCHHHHH
EKTELKDIYEVETHFDDVNEIKSFFAEE
HHHHHHHHHHHHHHHCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9045828; 9219999; 9384377 [H]