Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is 18310819

Identifier: 18310819

GI number: 18310819

Start: 2110230

End: 2110670

Strand: Reverse

Name: 18310819

Synonym: CPE1837

Alternate gene names: NA

Gene position: 2110670-2110230 (Counterclockwise)

Preceding gene: 18310820

Following gene: 18310818

Centisome position: 69.63

GC content: 18.37

Gene sequence:

>441_bases
ATGAGATTAGAGGTGAGGAGAATTTATATCAAAAAATATAAAAATTTTTTACCAATTGAATATGTAGAGGAGTATAACAG
AAAAATAAAGAAAAAGCTAAATATATACATATTGTTTTTATTATTATTTAATCTATTTTTTTATGGAAAAATTAAGACTG
AAAATAATAAAATAAAAAATTATTTAAGTGAAATAAAGGGAGTTAATATGGAAAGATCTTTAGACAAGGAATTTTTAGAA
GATATAAATAAGTTAAAGGAAATAATTAAAGATGAAAAGATATTAAATTTAAATCTAGAGAGAAAAAGTTTTGAATTAGA
AGTTAATAGTATTTATAAAAATTCTCTTATTAATTATATTAATAAAATTAATGGAAGAGTTTATGATATAAGCTTAAATG
AATCTAATAATACTTATAGATTAAAAGGAGAATTAAGGTGA

Upstream 100 bases:

>100_bases
GAAAAGGATTTTGGAGTATCTTTAAAAGACTTTACTTTTAAAATTCAGAAAGAGTATTTAAAGGAAGAAATAAAAGAATG
GTTTAAAGGTTTAAAATTAA

Downstream 100 bases:

>100_bases
AAAAATTAAAATTAGATGTAACTTTAGCTACTATTTTTATAGTTATACTATTAGTACAAGGTATAGAGCTTTTTCAATTA
AGAAATTATGAAATTCCAGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 146; Mature: 146

Protein sequence:

>146_residues
MRLEVRRIYIKKYKNFLPIEYVEEYNRKIKKKLNIYILFLLLFNLFFYGKIKTENNKIKNYLSEIKGVNMERSLDKEFLE
DINKLKEIIKDEKILNLNLERKSFELEVNSIYKNSLINYINKINGRVYDISLNESNNTYRLKGELR

Sequences:

>Translated_146_residues
MRLEVRRIYIKKYKNFLPIEYVEEYNRKIKKKLNIYILFLLLFNLFFYGKIKTENNKIKNYLSEIKGVNMERSLDKEFLE
DINKLKEIIKDEKILNLNLERKSFELEVNSIYKNSLINYINKINGRVYDISLNESNNTYRLKGELR
>Mature_146_residues
MRLEVRRIYIKKYKNFLPIEYVEEYNRKIKKKLNIYILFLLLFNLFFYGKIKTENNKIKNYLSEIKGVNMERSLDKEFLE
DINKLKEIIKDEKILNLNLERKSFELEVNSIYKNSLINYINKINGRVYDISLNESNNTYRLKGELR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17830; Mature: 17830

Theoretical pI: Translated: 10.10; Mature: 10.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLEVRRIYIKKYKNFLPIEYVEEYNRKIKKKLNIYILFLLLFNLFFYGKIKTENNKIKN
CCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCHHHHH
YLSEIKGVNMERSLDKEFLEDINKLKEIIKDEKILNLNLERKSFELEVNSIYKNSLINYI
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCEEEEHHHHHHHHHHHHHH
NKINGRVYDISLNESNNTYRLKGELR
HHHCCEEEEEEECCCCCEEEEEECCC
>Mature Secondary Structure
MRLEVRRIYIKKYKNFLPIEYVEEYNRKIKKKLNIYILFLLLFNLFFYGKIKTENNKIKN
CCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCHHHHH
YLSEIKGVNMERSLDKEFLEDINKLKEIIKDEKILNLNLERKSFELEVNSIYKNSLINYI
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCEEEEHHHHHHHHHHHHHH
NKINGRVYDISLNESNNTYRLKGELR
HHHCCEEEEEEECCCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA