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The map label for this gene is efp

Identifier: 18310817

GI number: 18310817

Start: 2109158

End: 2109715

Strand: Reverse

Name: efp

Synonym: CPE1835

Alternate gene names: 18310817

Gene position: 2109715-2109158 (Counterclockwise)

Preceding gene: 18310818

Following gene: 18310816

Centisome position: 69.59

GC content: 34.77

Gene sequence:

>558_bases
ATGATATCAGGAAGTGATTTAAGAAAAGGAACTACTTTTGAACTGGATGGACAAGTATACACAGTTATAGACTTCTTACA
CGTTAAACCAGGAAAAGGTGCTGCTTTCGTTAGAACTAAATTAAGAAACGTTATAATGGGTGGTGTTACAGACAGAACTT
TCAACCCAACTGATAAATTACAAGAAGCTATAATCGAAAGAAAAGAAATGCAATACCTTTACTCAGATGGAGAATTATAC
TACTTCATGGATCAAGAGACTTTCGAGCAAATTCCTTTAAACCATGAAAAAGTTGAAGATGCTATAAAATTCTTAAAAGA
AAACATGAACGCTGTAATCAAATTCTACAAAGGAGAAGCTTTCTCAGTAGAAGCTCCAAACTTTGTTGAGTTATTAATCA
CTGAGTGTGAGCCAAGTGTTAAAGGAAACACTGCTACTACAGCTATGAAAACTGCAGTTGTTGAAACTGGTGCAACAGTT
ATGGTTCCTATGTTCGTTGAAGAAGGAAACACTATAAGAATAGATACTAGAACTGGCGAGTACATGGAAAGAGTTTAA

Upstream 100 bases:

>100_bases
TTTAAATAGTAAATAAGTAACAAGGTAACTCTAGAGGGTATTAATTTATCTTAAAGGGTTATAATATAAAATGAATTAAT
AGATTTTGGAGGGATACTTA

Downstream 100 bases:

>100_bases
TAAAAACTTGATTTAAATGTATTTAAGTCAAATTTATCTAGTGAATATAGATAAAAATAAATTTATGCTAAGCTTAAAAA
GCTTAGCATATTTAATATAA

Product: elongation factor P

Products: NA

Alternate protein names: EF-P

Number of amino acids: Translated: 185; Mature: 185

Protein sequence:

>185_residues
MISGSDLRKGTTFELDGQVYTVIDFLHVKPGKGAAFVRTKLRNVIMGGVTDRTFNPTDKLQEAIIERKEMQYLYSDGELY
YFMDQETFEQIPLNHEKVEDAIKFLKENMNAVIKFYKGEAFSVEAPNFVELLITECEPSVKGNTATTAMKTAVVETGATV
MVPMFVEEGNTIRIDTRTGEYMERV

Sequences:

>Translated_185_residues
MISGSDLRKGTTFELDGQVYTVIDFLHVKPGKGAAFVRTKLRNVIMGGVTDRTFNPTDKLQEAIIERKEMQYLYSDGELY
YFMDQETFEQIPLNHEKVEDAIKFLKENMNAVIKFYKGEAFSVEAPNFVELLITECEPSVKGNTATTAMKTAVVETGATV
MVPMFVEEGNTIRIDTRTGEYMERV
>Mature_185_residues
MISGSDLRKGTTFELDGQVYTVIDFLHVKPGKGAAFVRTKLRNVIMGGVTDRTFNPTDKLQEAIIERKEMQYLYSDGELY
YFMDQETFEQIPLNHEKVEDAIKFLKENMNAVIKFYKGEAFSVEAPNFVELLITECEPSVKGNTATTAMKTAVVETGATV
MVPMFVEEGNTIRIDTRTGEYMERV

Specific function: Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing t

COG id: COG0231

COG function: function code J; Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A)

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the elongation factor P family

Homologues:

Organism=Escherichia coli, GI1790590, Length=181, Percent_Identity=43.0939226519337, Blast_Score=163, Evalue=8e-42,
Organism=Escherichia coli, GI87082061, Length=188, Percent_Identity=26.5957446808511, Blast_Score=80, Evalue=7e-17,

Paralogues:

None

Copy number: 1600 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): EFP_CLOP1 (Q0TPC2)

Other databases:

- EMBL:   CP000246
- RefSeq:   YP_696518.1
- ProteinModelPortal:   Q0TPC2
- SMR:   Q0TPC2
- STRING:   Q0TPC2
- GeneID:   4201848
- GenomeReviews:   CP000246_GR
- KEGG:   cpf:CPF_2089
- TIGR:   CPF_2089
- eggNOG:   COG0231
- HOGENOM:   HBG303311
- OMA:   MISSNDF
- ProtClustDB:   PRK00529
- BioCyc:   CPER195103:CPF_2089-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_00141
- InterPro:   IPR015365
- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR020599
- InterPro:   IPR013185
- InterPro:   IPR001059
- InterPro:   IPR013852
- InterPro:   IPR011768
- InterPro:   IPR014722
- InterPro:   IPR008991
- Gene3D:   G3DSA:2.40.50.140
- Gene3D:   G3DSA:2.30.30.30
- PIRSF:   PIRSF005901
- SMART:   SM00841
- TIGRFAMs:   TIGR00038

Pfam domain/function: PF01132 EFP; PF08207 EFP_N; PF09285 Elong-fact-P_C; SSF50249 Nucleic_acid_OB; SSF50104 Transl_SH3_like

EC number: NA

Molecular weight: Translated: 20961; Mature: 20961

Theoretical pI: Translated: 4.63; Mature: 4.63

Prosite motif: PS01275 EFP; PS00189 LIPOYL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISGSDLRKGTTFELDGQVYTVIDFLHVKPGKGAAFVRTKLRNVIMGGVTDRTFNPTDKL
CCCCCCCCCCCEEEECCEEEEEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHH
QEAIIERKEMQYLYSDGELYYFMDQETFEQIPLNHEKVEDAIKFLKENMNAVIKFYKGEA
HHHHHHHHHHHHEECCCCEEEEECCHHHHHCCCCHHHHHHHHHHHHHHHHHEEEEECCCE
FSVEAPNFVELLITECEPSVKGNTATTAMKTAVVETGATVMVPMFVEEGNTIRIDTRTGE
EEECCCCCEEHEEECCCCCCCCCCHHHHHHHHHHHCCCEEEEEEEECCCCEEEEECCCCH
YMERV
HHHCC
>Mature Secondary Structure
MISGSDLRKGTTFELDGQVYTVIDFLHVKPGKGAAFVRTKLRNVIMGGVTDRTFNPTDKL
CCCCCCCCCCCEEEECCEEEEEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHH
QEAIIERKEMQYLYSDGELYYFMDQETFEQIPLNHEKVEDAIKFLKENMNAVIKFYKGEA
HHHHHHHHHHHHEECCCCEEEEECCHHHHHCCCCHHHHHHHHHHHHHHHHHEEEEECCCE
FSVEAPNFVELLITECEPSVKGNTATTAMKTAVVETGATVMVPMFVEEGNTIRIDTRTGE
EEECCCCCEEHEEECCCCCCCCCCHHHHHHHHHHHCCCEEEEEEEECCCCEEEEECCCCH
YMERV
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA