| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is spoIIIAG [H]
Identifier: 18310809
GI number: 18310809
Start: 2103821
End: 2104405
Strand: Reverse
Name: spoIIIAG [H]
Synonym: CPE1827
Alternate gene names: 18310809
Gene position: 2104405-2103821 (Counterclockwise)
Preceding gene: 18310810
Following gene: 18310808
Centisome position: 69.42
GC content: 28.21
Gene sequence:
>585_bases ATGTCTAAAATTTTGAAACAGAAGAATATTACTAATTTAATAATATTACTTTTATTAGTTATAATGTTTTATTTAGTTGT GTCATATTTTACAGGTGTAAACAATATAACTAAGAGTGAGAAAACTAATTTAGAAAAAGTATCAAAAGAGGATATGAATA GTAATAGTCAAAAAGATTCAGAAGTTTTAAGTTATCAAGAAAAACAAGAAAAAGATTTAGAGAGGATATTAGGAAAAATA AATGGAGTAGGATCAGTAGATGTAGTAATAAACTTTCAAAGCAGTGAAGTAAAAGTGCCAGCTGTAGATAATTCTTCTCA AAAAAGCACTACAGAAGAAACTGATAGTGAAGGAGGAACAAGGGTTAATTCACAAGAAACAGATGGAGATAAAATAGTTA TGTCAAATAGCTCAAATGGAAGTGAACCAGTTATATTAAAAACAGAAAAGCCAGAGGTTTTAGGAGTCATGGTTGTGGCT GAAGGTGCAGAAGATAGCAAGATAAAGTATGAAATAACAAAAGCGATATCAAGCTTATATAACATAAGTGTTGATAAGGT AAATGTATTAGCAATGAAAAAATAA
Upstream 100 bases:
>100_bases TTGAAAAGTTTGTTGAAAAGGAACTTGAAATTTCTCATGAAAATATAATTGTTTCATATGCCTAGGAGGTGGTATAAAGG TGCAGGGGTTCAAAGATAAA
Downstream 100 bases:
>100_bases AATTAAAATTTATGGGGGGTTCATTATGAACAGAAAACAAGCAGGGATAATTTTAACACTTTTAGCATTAATAGTTTGTA CTGGCGTTCTAGCAACTAGA
Product: stage III sporulation protein AG
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 194; Mature: 193
Protein sequence:
>194_residues MSKILKQKNITNLIILLLLVIMFYLVVSYFTGVNNITKSEKTNLEKVSKEDMNSNSQKDSEVLSYQEKQEKDLERILGKI NGVGSVDVVINFQSSEVKVPAVDNSSQKSTTEETDSEGGTRVNSQETDGDKIVMSNSSNGSEPVILKTEKPEVLGVMVVA EGAEDSKIKYEITKAISSLYNISVDKVNVLAMKK
Sequences:
>Translated_194_residues MSKILKQKNITNLIILLLLVIMFYLVVSYFTGVNNITKSEKTNLEKVSKEDMNSNSQKDSEVLSYQEKQEKDLERILGKI NGVGSVDVVINFQSSEVKVPAVDNSSQKSTTEETDSEGGTRVNSQETDGDKIVMSNSSNGSEPVILKTEKPEVLGVMVVA EGAEDSKIKYEITKAISSLYNISVDKVNVLAMKK >Mature_193_residues SKILKQKNITNLIILLLLVIMFYLVVSYFTGVNNITKSEKTNLEKVSKEDMNSNSQKDSEVLSYQEKQEKDLERILGKIN GVGSVDVVINFQSSEVKVPAVDNSSQKSTTEETDSEGGTRVNSQETDGDKIVMSNSSNGSEPVILKTEKPEVLGVMVVAE GAEDSKIKYEITKAISSLYNISVDKVNVLAMKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014195 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21373; Mature: 21241
Theoretical pI: Translated: 4.82; Mature: 4.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKILKQKNITNLIILLLLVIMFYLVVSYFTGVNNITKSEKTNLEKVSKEDMNSNSQKDS CCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCHHH EVLSYQEKQEKDLERILGKINGVGSVDVVINFQSSEVKVPAVDNSSQKSTTEETDSEGGT HHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCEEECCCCCCCCCCCCCCCCCCCCC RVNSQETDGDKIVMSNSSNGSEPVILKTEKPEVLGVMVVAEGAEDSKIKYEITKAISSLY CCCCCCCCCCEEEEECCCCCCCCEEEECCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHH NISVDKVNVLAMKK CCCCCCEEEEEECC >Mature Secondary Structure SKILKQKNITNLIILLLLVIMFYLVVSYFTGVNNITKSEKTNLEKVSKEDMNSNSQKDS CCHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCHHH EVLSYQEKQEKDLERILGKINGVGSVDVVINFQSSEVKVPAVDNSSQKSTTEETDSEGGT HHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCEEECCCCCCCCCCCCCCCCCCCCC RVNSQETDGDKIVMSNSSNGSEPVILKTEKPEVLGVMVVAEGAEDSKIKYEITKAISSLY CCCCCCCCCCEEEEECCCCCCCCEEEECCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHH NISVDKVNVLAMKK CCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377 [H]