Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is spoIIIAH

Identifier: 18310808

GI number: 18310808

Start: 2103298

End: 2103795

Strand: Reverse

Name: spoIIIAH

Synonym: CPE1826

Alternate gene names: NA

Gene position: 2103795-2103298 (Counterclockwise)

Preceding gene: 18310809

Following gene: 18310807

Centisome position: 69.4

GC content: 29.12

Gene sequence:

>498_bases
ATGAACAGAAAACAAGCAGGGATAATTTTAACACTTTTAGCATTAATAGTTTGTACTGGCGTTCTAGCAACTAGAGTTAA
CAATCAAATTAAAGAGAGCATGGGAGAAGTTCCTACAGCTTTTGGAGAAAATGATGACAATGCAACTGAAACATCTTCAA
ATTATTTTTATGAATCAAGAAATTTAAGAGAACAAAAAGATTCTAAAACTATCGATAACTTAAAAGCTATAGTAGAAGAT
AAGAACACTTCAGCAGAACAAAAAGAAGAAGCTGAAAAAGAATTAACTGAAAAAACTATGGCAAGAGATTATGAAACAAG
AATAGAACTTAGTATAAAGAGCAAAGGTTATGAAGATGTAATATGTTTTATAGATGGTGATAATGCTAAGGTTGTAGTTA
AGACTAATGAGGAGTTAACTCAAGAGAAAATGGTTGAAATCCAAGATATAGTTATGAATGTATCAAAAGTATATGACGTT
GATATAGAAAAAAAATAA

Upstream 100 bases:

>100_bases
GAAATAACAAAAGCGATATCAAGCTTATATAACATAAGTGTTGATAAGGTAAATGTATTAGCAATGAAAAAATAAAATTA
AAATTTATGGGGGGTTCATT

Downstream 100 bases:

>100_bases
TTAATTGTATTGTAATTAGTTATTTGCTATAATGAACCTATAACTAATTAAGTTTCGTGAAGATTAGTAGGAGGGTTCAG
CTTTATGAATGAAATGAATA

Product: stage III sporulation protein AH

Products: NA

Alternate protein names: Stage III Sporulation Protein IIIAH

Number of amino acids: Translated: 165; Mature: 165

Protein sequence:

>165_residues
MNRKQAGIILTLLALIVCTGVLATRVNNQIKESMGEVPTAFGENDDNATETSSNYFYESRNLREQKDSKTIDNLKAIVED
KNTSAEQKEEAEKELTEKTMARDYETRIELSIKSKGYEDVICFIDGDNAKVVVKTNEELTQEKMVEIQDIVMNVSKVYDV
DIEKK

Sequences:

>Translated_165_residues
MNRKQAGIILTLLALIVCTGVLATRVNNQIKESMGEVPTAFGENDDNATETSSNYFYESRNLREQKDSKTIDNLKAIVED
KNTSAEQKEEAEKELTEKTMARDYETRIELSIKSKGYEDVICFIDGDNAKVVVKTNEELTQEKMVEIQDIVMNVSKVYDV
DIEKK
>Mature_165_residues
MNRKQAGIILTLLALIVCTGVLATRVNNQIKESMGEVPTAFGENDDNATETSSNYFYESRNLREQKDSKTIDNLKAIVED
KNTSAEQKEEAEKELTEKTMARDYETRIELSIKSKGYEDVICFIDGDNAKVVVKTNEELTQEKMVEIQDIVMNVSKVYDV
DIEKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18723; Mature: 18723

Theoretical pI: Translated: 4.40; Mature: 4.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRKQAGIILTLLALIVCTGVLATRVNNQIKESMGEVPTAFGENDDNATETSSNYFYESR
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEECCC
NLREQKDSKTIDNLKAIVEDKNTSAEQKEEAEKELTEKTMARDYETRIELSIKSKGYEDV
CHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCHHHEEEEEECCCCCCEE
ICFIDGDNAKVVVKTNEELTQEKMVEIQDIVMNVSKVYDVDIEKK
EEEEECCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MNRKQAGIILTLLALIVCTGVLATRVNNQIKESMGEVPTAFGENDDNATETSSNYFYESR
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEECCC
NLREQKDSKTIDNLKAIVEDKNTSAEQKEEAEKELTEKTMARDYETRIELSIKSKGYEDV
CHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCHHHEEEEEECCCCCCEE
ICFIDGDNAKVVVKTNEELTQEKMVEIQDIVMNVSKVYDVDIEKK
EEEEECCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA