| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is 18310738
Identifier: 18310738
GI number: 18310738
Start: 2034413
End: 2035750
Strand: Reverse
Name: 18310738
Synonym: CPE1756
Alternate gene names: NA
Gene position: 2035750-2034413 (Counterclockwise)
Preceding gene: 18310739
Following gene: 18310737
Centisome position: 67.15
GC content: 30.57
Gene sequence:
>1338_bases ATGAAAAGTAGAATTGCTGAAGTCTTACCAGGAGGAATTGGTGAGGAATTAGGCTTTGAAAAGGGAGATATACTATTAAG CATAAACGGTACTAAAGTTGAAGATATACTTGATTATAGATTTTTATTAGCAGACGAATACGTTGAGGTAGAAATATTAA AACCAAACAAAGAGGTTTGGGAATTTGAAATAGAAAAGGAATATGGCGAAGATTTAGGAGTGGAATTTGAAGAGGCCATC CTAGACAAAGCTAAAAGTTGTACAAATAAATGTATATTTTGCTTCATAGATCAATTACCAAAGGGAATGAGAAAAACTTT ATATTTTAAGGACGATGATTCAAGACTTTCATTTTTACAAGGTAACTTTGTTACTTTAACAAATATGAAGGATGAAGATA TTGATAGAATTATAAAATATAGAATAAGTCCTATAAATGTATCAGTTCATACAACAAATCCAGATTTAAGAAAAAAAATT CTTAATAATAGATTTGCAGGGAATGTATATGAAAGATTACAAAAATTAGCGGCAGCTGGTATAACTGTAAATGCTCAAAT AGTTGTTATGCCAGGAATAAATAATGGAGACGAATTAGTTAGAACTGTAGAAGATCTTTATAAATTACGTCCTTCAATAG AAAATGTTGCTGCTGTACCAATTGGAATAACAAAGTTTAGAGAAGGATTAGCTGACCTTGAAATATATAATAAAGAAACA GCTAAAGAAGAATTAGATAGAATAAAAGTTCTTCAAGAAAAATATATGAAAGAAATAGGAAGCCCATTTGTAAGATTATC AGATGAGTTTTATGTTATGGCAGATGAGGAAGTTCCAAATGAAGAATTCTATAATGGATATGAGCAAATAGAAGACGGAG TTGGAATGATAAGACTTCTAAGAGAAACCATGGCAGTAGATATAAAGAATAAGTTAACTAAAAGTGGAAAAGGTAAATTT ACTCTTATTACAGGAACATCTGCCTTTAAAGAATTAGATCAGGTTTGTACCGATATAAGAGAAGAGAATAATAATATAGA TATTAAGTGTAAGGTTATATTAAATGATTTCTTTGGGCACACAATAACAGTTGCAGGACTTTTAACTGGGCAAGATGTTA TTGCTCAACTTAAGGATAACATTGATAGTGAGTACTTAATTATGGCAGATAACATGTTTAGAAAAGGTTACGAGCCAGGA GATATAACTCAAAGAATAATGTTAGATGATTTGACAGCAAAGGATATTGAGGAAAGATTGGGAGTTAAAGTTATAGTTTG TAGCTATACAGGGGAAGACCTAATAGACTTAATAAATGAACACTGTGAGGAGGAATAA
Upstream 100 bases:
>100_bases GAAACAAAACACAATATATAGGTATAAAGTTATTTCAGTTGACTACATTATTTAATTAAGGTAATATAACATAGATAGTA CTAAAATAGGAGTGAAGCAT
Downstream 100 bases:
>100_bases GAATGAGTAAACCAATAGTTGCTATGGTTGGAAGACCGAACGTAGGTAAGTCGACTCTTTTCAATAAATTAGCAGGAAAA AGAATTTCAATAGTACAAGA
Product: hypothetical protein
Products: NA
Alternate protein names: FeS-Containing Oxidoreductase; FeS-Containing Cyanobacterial-Specific Oxidoreductase; PDZ Domain Protein; FeS-Containing Organism-Specific Oxidoreductase; FeS-Containing-Specific Oxidoreductase; Response Regulator Receiver Protein; PDZ Domain-Containing Protein
Number of amino acids: Translated: 445; Mature: 445
Protein sequence:
>445_residues MKSRIAEVLPGGIGEELGFEKGDILLSINGTKVEDILDYRFLLADEYVEVEILKPNKEVWEFEIEKEYGEDLGVEFEEAI LDKAKSCTNKCIFCFIDQLPKGMRKTLYFKDDDSRLSFLQGNFVTLTNMKDEDIDRIIKYRISPINVSVHTTNPDLRKKI LNNRFAGNVYERLQKLAAAGITVNAQIVVMPGINNGDELVRTVEDLYKLRPSIENVAAVPIGITKFREGLADLEIYNKET AKEELDRIKVLQEKYMKEIGSPFVRLSDEFYVMADEEVPNEEFYNGYEQIEDGVGMIRLLRETMAVDIKNKLTKSGKGKF TLITGTSAFKELDQVCTDIREENNNIDIKCKVILNDFFGHTITVAGLLTGQDVIAQLKDNIDSEYLIMADNMFRKGYEPG DITQRIMLDDLTAKDIEERLGVKVIVCSYTGEDLIDLINEHCEEE
Sequences:
>Translated_445_residues MKSRIAEVLPGGIGEELGFEKGDILLSINGTKVEDILDYRFLLADEYVEVEILKPNKEVWEFEIEKEYGEDLGVEFEEAI LDKAKSCTNKCIFCFIDQLPKGMRKTLYFKDDDSRLSFLQGNFVTLTNMKDEDIDRIIKYRISPINVSVHTTNPDLRKKI LNNRFAGNVYERLQKLAAAGITVNAQIVVMPGINNGDELVRTVEDLYKLRPSIENVAAVPIGITKFREGLADLEIYNKET AKEELDRIKVLQEKYMKEIGSPFVRLSDEFYVMADEEVPNEEFYNGYEQIEDGVGMIRLLRETMAVDIKNKLTKSGKGKF TLITGTSAFKELDQVCTDIREENNNIDIKCKVILNDFFGHTITVAGLLTGQDVIAQLKDNIDSEYLIMADNMFRKGYEPG DITQRIMLDDLTAKDIEERLGVKVIVCSYTGEDLIDLINEHCEEE >Mature_445_residues MKSRIAEVLPGGIGEELGFEKGDILLSINGTKVEDILDYRFLLADEYVEVEILKPNKEVWEFEIEKEYGEDLGVEFEEAI LDKAKSCTNKCIFCFIDQLPKGMRKTLYFKDDDSRLSFLQGNFVTLTNMKDEDIDRIIKYRISPINVSVHTTNPDLRKKI LNNRFAGNVYERLQKLAAAGITVNAQIVVMPGINNGDELVRTVEDLYKLRPSIENVAAVPIGITKFREGLADLEIYNKET AKEELDRIKVLQEKYMKEIGSPFVRLSDEFYVMADEEVPNEEFYNGYEQIEDGVGMIRLLRETMAVDIKNKLTKSGKGKF TLITGTSAFKELDQVCTDIREENNNIDIKCKVILNDFFGHTITVAGLLTGQDVIAQLKDNIDSEYLIMADNMFRKGYEPG DITQRIMLDDLTAKDIEERLGVKVIVCSYTGEDLIDLINEHCEEE
Specific function: Unknown
COG id: COG1625
COG function: function code C; Fe-S oxidoreductase, related to NifB/MoaA family
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50706; Mature: 50706
Theoretical pI: Translated: 4.38; Mature: 4.38
Prosite motif: PS50106 PDZ
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSRIAEVLPGGIGEELGFEKGDILLSINGTKVEDILDYRFLLADEYVEVEILKPNKEVW CCCCHHHHCCCCCCHHCCCCCCCEEEEECCCCHHHHHHHHHHHCCCEEEEEEECCCCCCE EFEIEKEYGEDLGVEFEEAILDKAKSCTNKCIFCFIDQLPKGMRKTLYFKDDDSRLSFLQ EEEEEHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCEEEECCCCCEEEEC GNFVTLTNMKDEDIDRIIKYRISPINVSVHTTNPDLRKKILNNRFAGNVYERLQKLAAAG CCEEEEECCCHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHCCCCCHHHHHHHHHHHCC ITVNAQIVVMPGINNGDELVRTVEDLYKLRPSIENVAAVPIGITKFREGLADLEIYNKET CEEEEEEEEECCCCCHHHHHHHHHHHHHHCCCHHHHEECCCCHHHHHCCHHHHHHHCHHH AKEELDRIKVLQEKYMKEIGSPFVRLSDEFYVMADEEVPNEEFYNGYEQIEDGVGMIRLL HHHHHHHHHHHHHHHHHHHCCCEEEECCCEEEEECCCCCCHHHHCHHHHHHHHHHHHHHH RETMAVDIKNKLTKSGKGKFTLITGTSAFKELDQVCTDIREENNNIDIKCKVILNDFFGH HHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHHCCCCEEEEEEEEEEHHCCC TITVAGLLTGQDVIAQLKDNIDSEYLIMADNMFRKGYEPGDITQRIMLDDLTAKDIEERL CEEEEEHHCCHHHHHHHHHCCCCCEEEEECHHHHCCCCCCHHHHHHHHHCCCHHHHHHHC GVKVIVCSYTGEDLIDLINEHCEEE CEEEEEEECCCHHHHHHHHHHCCCC >Mature Secondary Structure MKSRIAEVLPGGIGEELGFEKGDILLSINGTKVEDILDYRFLLADEYVEVEILKPNKEVW CCCCHHHHCCCCCCHHCCCCCCCEEEEECCCCHHHHHHHHHHHCCCEEEEEEECCCCCCE EFEIEKEYGEDLGVEFEEAILDKAKSCTNKCIFCFIDQLPKGMRKTLYFKDDDSRLSFLQ EEEEEHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCEEEECCCCCEEEEC GNFVTLTNMKDEDIDRIIKYRISPINVSVHTTNPDLRKKILNNRFAGNVYERLQKLAAAG CCEEEEECCCHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHCCCCCHHHHHHHHHHHCC ITVNAQIVVMPGINNGDELVRTVEDLYKLRPSIENVAAVPIGITKFREGLADLEIYNKET CEEEEEEEEECCCCCHHHHHHHHHHHHHHCCCHHHHEECCCCHHHHHCCHHHHHHHCHHH AKEELDRIKVLQEKYMKEIGSPFVRLSDEFYVMADEEVPNEEFYNGYEQIEDGVGMIRLL HHHHHHHHHHHHHHHHHHHCCCEEEECCCEEEEECCCCCCHHHHCHHHHHHHHHHHHHHH RETMAVDIKNKLTKSGKGKFTLITGTSAFKELDQVCTDIREENNNIDIKCKVILNDFFGH HHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHHCCCCEEEEEEEEEEHHCCC TITVAGLLTGQDVIAQLKDNIDSEYLIMADNMFRKGYEPGDITQRIMLDDLTAKDIEERL CEEEEEHHCCHHHHHHHHHCCCCCEEEEECHHHHCCCCCCHHHHHHHHHCCCHHHHHHHC GVKVIVCSYTGEDLIDLINEHCEEE CEEEEEEECCCHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA