| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is spoIIIE
Identifier: 18310658
GI number: 18310658
Start: 1951314
End: 1953704
Strand: Reverse
Name: spoIIIE
Synonym: CPE1676
Alternate gene names: 18310658
Gene position: 1953704-1951314 (Counterclockwise)
Preceding gene: 18310659
Following gene: 18310657
Centisome position: 64.45
GC content: 31.03
Gene sequence:
>2391_bases ATGGCTGGGGGAAAAAAGAAAACCGCAACTAAAACTCAAAAAAAGAAAAATCAAAGCCAAATTAAAGTTACAGAAGAAAT ATATGCCTTAATAGCGATATGTGTTTCTTTAATTGTTATGTTTAGTTTATATACTGATAAAGCAGGATATTTAAGTGTTA TATCAAGAACTCTCTTAATAGGACTTTTTGGAATAGGAGCTTTTTTTATTCCAATTTACATAATATATTTATGTACAAAG CTTTTCTTATTTAAAAGAGAGGTGTTATTTTCAAGAATAGGATTAGGAATAACCATAGCACTTATAACTAGTGTTTTACT TATTCAGACTGTGAATATAAACGATTATTATGTTCAGGGAAGTATATGGGGATCTATAAAAACTATATGGCATTCTCAAA GTGAATGGCATGGAGGAGTAGTAGGATTTTTAATTGTATTACCATTATATAAATTAGTAGGTAAAATAGGACTTTTTGTT ATTTTTGTAACTTTATATCTTATATCTTCAATGCTTATATTCGATTATAATCTAGTTTCAATAAGAAATTTCTTTGGAGG TTTTAAGGAAAAAGCTTCTAAGGTTAAATTTGTGGATAAAAAGTATGAAAAAGATGATTATATTAATTTAAAGAAAAAAG ATGGAGCTTCTGAAGGAAATAAAGAGAGTAAAAAAGATGATATTTCAGAGGATAACAATAAGATAAAAATATTAGACTTT ATGAAAAATTCTTCTTTAAATGATATAGAAGATAATAAGAAGGAAAAAGATAATCAATTAAAGGATAATATTAAGATAAA TGATTTTAAACAAGAGTCTAAAATGCCTAGAGACTTAAGTTTAGATAACACCATAATAGAGCAAAGAGGATTCAACTCAG AAAAAGCTAAGGAAGAAGAATCTATAGATAAAGAAATATCAAATAATATAGCTAGTAAAGGCTCAAGTGTAGGGGCTAGT TATGTTGCGCCAAATGCAGATTTATTAAATTTAAACAATAATAATGAATTAGATAAAGATGATAAAAAGGCATTATTAGC TAATGCTGCTAAACTTGAAGAAACTCTTATGAGCTTTGGTGTAGAGGCAAAAATACTTCAAGTTACAAAAGGGCCATCTG TTACTAGATTTGAACTTCAACCTAAGGCTGGTATAAAGGTTAGTAAAATAGTTAATTTAGCTGATGATATAGCTTTAGGA TTAGCAGCTAAAGGGGTTAGAATAGAGGCACCTATTCCAGGAAAATCTGCCATAGGAATAGAAGTTCCAAATAAAGAGCA AACACCAGTTTTCTTTAGAGAGATTGTAGAATCTAAAGAATTTTTAGATAACAAGTTTAAGGTAGCTTGTGCTTTAGGAA AAGACATAACAGGTAAGGCTGTTGTTACAGATTTAAGTAAGATGCCTCACGTGCTTATTGCAGGGGCAACTGGTTCTGGT AAGAGTGTATGCATAAACACATTAATAGTAAGTATATTATATAAGTATTCTCCAGATGAAGTTAAGCTTTTAATGATAGA CCCAAAAGTTGTTGAATTAAATGTTTATAATGGAATTCCACACTTGCTAATTCCAGTAGTTACAGATCCTAAGAAGGCTG CTGCGGCATTAAACTGGGCTGTAAATGAAATGACTAGAAGATATAAACTTTTTGCAGATAATGGAGTAAGAAATATAGAA TCATATAATGCTTTATATAATAAAGGAGAAGTTCCAGAGAAGCTTCCTTATATAGTTATTATAGTAGATGAGCTTGCAGA CCTTATGATGGCTTGTCCTCATGATGTAGAAGATTATATTTGTAGACTTGCCCAAATGGCTAGAGCCGCAGGTATGCATT TAGTAATAGCTACTCAAAGGCCATCTGTAGATGTAATTACAGGGGTAATTAAGGCTAATATACCTTCTAGAATATCCTTT GCAGTTTCAAGCCAAATTGACTCTAGAACAATACTAGATTCAGCAGGAGCTGAAAAACTTTTAGGTAGGGGAGATATGTT ATTCTACCCAGTTGGAGAGTCTAAGCCTCAAAGAGTTCAAGGAGCCTTTATTTCAGAGGAAGAAGTTGAACATGTTGTAT CCTTTATAAAAGAGTCACAAAGGGATGCTCAGTATGAAGAAGATATATTAGAACATATAAACTCAGCAACTATTGCTTCA GAGGGAAATGGTGATGGTGATAGGGATGAACTTTTAGATGAAGCTATAGAAATCGTAGTTGAAAGTGGTCAAGCTTCAGC ATCATATTTACAAAGAAGATTAAGAATAGGATTTAATAGAGCGGCAAGAATAATAGAAGAGCTAGAAGAATGTGGTGTTA TTTCTAGAAGAGATGGAAGTAAACCAAGACAAGTACTTCTTAGTAAAGATGAATTAGAAAATATGAAATAA
Upstream 100 bases:
>100_bases AATATTTTGACAATTTATAGTCATTTATGTATATAATATTTTTTGGTACAAGTATTTTACCATTTTGAAATTAAAATAGG GTGAGGTGATTTAGTTTAGT
Downstream 100 bases:
>100_bases AAACTTGTTTAATTTAAAAAAGAGTTTTAAAATAAGAAATATATATTTAAACGTAGGAGGAAGTAGATTTGGCGAAATAT AAGGTAGGAATGGTGAGTTT
Product: DNA translocase FtsK
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 796; Mature: 795
Protein sequence:
>796_residues MAGGKKKTATKTQKKKNQSQIKVTEEIYALIAICVSLIVMFSLYTDKAGYLSVISRTLLIGLFGIGAFFIPIYIIYLCTK LFLFKREVLFSRIGLGITIALITSVLLIQTVNINDYYVQGSIWGSIKTIWHSQSEWHGGVVGFLIVLPLYKLVGKIGLFV IFVTLYLISSMLIFDYNLVSIRNFFGGFKEKASKVKFVDKKYEKDDYINLKKKDGASEGNKESKKDDISEDNNKIKILDF MKNSSLNDIEDNKKEKDNQLKDNIKINDFKQESKMPRDLSLDNTIIEQRGFNSEKAKEEESIDKEISNNIASKGSSVGAS YVAPNADLLNLNNNNELDKDDKKALLANAAKLEETLMSFGVEAKILQVTKGPSVTRFELQPKAGIKVSKIVNLADDIALG LAAKGVRIEAPIPGKSAIGIEVPNKEQTPVFFREIVESKEFLDNKFKVACALGKDITGKAVVTDLSKMPHVLIAGATGSG KSVCINTLIVSILYKYSPDEVKLLMIDPKVVELNVYNGIPHLLIPVVTDPKKAAAALNWAVNEMTRRYKLFADNGVRNIE SYNALYNKGEVPEKLPYIVIIVDELADLMMACPHDVEDYICRLAQMARAAGMHLVIATQRPSVDVITGVIKANIPSRISF AVSSQIDSRTILDSAGAEKLLGRGDMLFYPVGESKPQRVQGAFISEEEVEHVVSFIKESQRDAQYEEDILEHINSATIAS EGNGDGDRDELLDEAIEIVVESGQASASYLQRRLRIGFNRAARIIEELEECGVISRRDGSKPRQVLLSKDELENMK
Sequences:
>Translated_796_residues MAGGKKKTATKTQKKKNQSQIKVTEEIYALIAICVSLIVMFSLYTDKAGYLSVISRTLLIGLFGIGAFFIPIYIIYLCTK LFLFKREVLFSRIGLGITIALITSVLLIQTVNINDYYVQGSIWGSIKTIWHSQSEWHGGVVGFLIVLPLYKLVGKIGLFV IFVTLYLISSMLIFDYNLVSIRNFFGGFKEKASKVKFVDKKYEKDDYINLKKKDGASEGNKESKKDDISEDNNKIKILDF MKNSSLNDIEDNKKEKDNQLKDNIKINDFKQESKMPRDLSLDNTIIEQRGFNSEKAKEEESIDKEISNNIASKGSSVGAS YVAPNADLLNLNNNNELDKDDKKALLANAAKLEETLMSFGVEAKILQVTKGPSVTRFELQPKAGIKVSKIVNLADDIALG LAAKGVRIEAPIPGKSAIGIEVPNKEQTPVFFREIVESKEFLDNKFKVACALGKDITGKAVVTDLSKMPHVLIAGATGSG KSVCINTLIVSILYKYSPDEVKLLMIDPKVVELNVYNGIPHLLIPVVTDPKKAAAALNWAVNEMTRRYKLFADNGVRNIE SYNALYNKGEVPEKLPYIVIIVDELADLMMACPHDVEDYICRLAQMARAAGMHLVIATQRPSVDVITGVIKANIPSRISF AVSSQIDSRTILDSAGAEKLLGRGDMLFYPVGESKPQRVQGAFISEEEVEHVVSFIKESQRDAQYEEDILEHINSATIAS EGNGDGDRDELLDEAIEIVVESGQASASYLQRRLRIGFNRAARIIEELEECGVISRRDGSKPRQVLLSKDELENMK >Mature_795_residues AGGKKKTATKTQKKKNQSQIKVTEEIYALIAICVSLIVMFSLYTDKAGYLSVISRTLLIGLFGIGAFFIPIYIIYLCTKL FLFKREVLFSRIGLGITIALITSVLLIQTVNINDYYVQGSIWGSIKTIWHSQSEWHGGVVGFLIVLPLYKLVGKIGLFVI FVTLYLISSMLIFDYNLVSIRNFFGGFKEKASKVKFVDKKYEKDDYINLKKKDGASEGNKESKKDDISEDNNKIKILDFM KNSSLNDIEDNKKEKDNQLKDNIKINDFKQESKMPRDLSLDNTIIEQRGFNSEKAKEEESIDKEISNNIASKGSSVGASY VAPNADLLNLNNNNELDKDDKKALLANAAKLEETLMSFGVEAKILQVTKGPSVTRFELQPKAGIKVSKIVNLADDIALGL AAKGVRIEAPIPGKSAIGIEVPNKEQTPVFFREIVESKEFLDNKFKVACALGKDITGKAVVTDLSKMPHVLIAGATGSGK SVCINTLIVSILYKYSPDEVKLLMIDPKVVELNVYNGIPHLLIPVVTDPKKAAAALNWAVNEMTRRYKLFADNGVRNIES YNALYNKGEVPEKLPYIVIIVDELADLMMACPHDVEDYICRLAQMARAAGMHLVIATQRPSVDVITGVIKANIPSRISFA VSSQIDSRTILDSAGAEKLLGRGDMLFYPVGESKPQRVQGAFISEEEVEHVVSFIKESQRDAQYEEDILEHINSATIASE GNGDGDRDELLDEAIEIVVESGQASASYLQRRLRIGFNRAARIIEELEECGVISRRDGSKPRQVLLSKDELENMK
Specific function: DNA motor protein, which is both required to move DNA out of the region of the septum during cell division and for the septum formation. Tracks DNA in an ATP-dependent manner by generating positive supercoils in front of it and negative supercoils behind
COG id: COG1674
COG function: function code D; DNA segregation ATPase FtsK/SpoIIIE and related proteins
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein. Note=Located at the septum. The large C-terminal part of the protein is cytoplasmic (Potential)
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 FtsK domain
Homologues:
Organism=Escherichia coli, GI1787117, Length=485, Percent_Identity=48.659793814433, Blast_Score=434, Evalue=1e-122,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): FTSK_CLOPE (Q8XJS8)
Other databases:
- EMBL: BA000016 - RefSeq: NP_562592.1 - ProteinModelPortal: Q8XJS8 - SMR: Q8XJS8 - GeneID: 989986 - GenomeReviews: BA000016_GR - KEGG: cpe:CPE1676 - NMPDR: fig|195102.1.peg.1739 - HOGENOM: HBG662140 - OMA: AAALNWA - ProtClustDB: CLSK882943 - BioCyc: CPER195102:CPE1676-MONOMER - InterPro: IPR003593 - InterPro: IPR018541 - InterPro: IPR002543 - InterPro: IPR011991 - Gene3D: G3DSA:1.10.10.10 - SMART: SM00382 - SMART: SM00843
Pfam domain/function: PF09397 Ftsk_gamma; PF01580 FtsK_SpoIIIE
EC number: NA
Molecular weight: Translated: 88368; Mature: 88237
Theoretical pI: Translated: 6.94; Mature: 6.94
Prosite motif: PS50901 FTSK
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0xec5f564)-; HASH(0xf57957c)-; HASH(0xea03424)-; HASH(0xe704644)-; HASH(0xf39647c)-;
Cys/Met content:
0.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGGKKKTATKTQKKKNQSQIKVTEEIYALIAICVSLIVMFSLYTDKAGYLSVISRTLLI CCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH GLFGIGAFFIPIYIIYLCTKLFLFKREVLFSRIGLGITIALITSVLLIQTVNINDYYVQG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHEEECCCEEEEEE SIWGSIKTIWHSQSEWHGGVVGFLIVLPLYKLVGKIGLFVIFVTLYLISSMLIFDYNLVS EECHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH IRNFFGGFKEKASKVKFVDKKYEKDDYINLKKKDGASEGNKESKKDDISEDNNKIKILDF HHHHHCHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEE MKNSSLNDIEDNKKEKDNQLKDNIKINDFKQESKMPRDLSLDNTIIEQRGFNSEKAKEEE ECCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCHHHHHHCCCCCHHHHHHH SIDKEISNNIASKGSSVGASYVAPNADLLNLNNNNELDKDDKKALLANAAKLEETLMSFG HHHHHHHHHHHHCCCCCCCHHCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCC VEAKILQVTKGPSVTRFELQPKAGIKVSKIVNLADDIALGLAAKGVRIEAPIPGKSAIGI CCEEEEEEECCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCEEEE EVPNKEQTPVFFREIVESKEFLDNKFKVACALGKDITGKAVVTDLSKMPHVLIAGATGSG ECCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHCCCEEEEECCCCC KSVCINTLIVSILYKYSPDEVKLLMIDPKVVELNVYNGIPHLLIPVVTDPKKAAAALNWA CHHHHHHHHHHHHHHCCCCCEEEEEECCEEEEEEECCCCCCEEEEEECCCHHHHHHHHHH VNEMTRRYKLFADNGVRNIESYNALYNKGEVPEKLPYIVIIVDELADLMMACPHDVEDYI HHHHHHHHHHEECCCCHHHHHHHHHHCCCCCCCCCCEEEEEHHHHHHHHHHCCCCHHHHH CRLAQMARAAGMHLVIATQRPSVDVITGVIKANIPSRISFAVSSQIDSRTILDSAGAEKL HHHHHHHHHCCCEEEEEECCCCHHHHHHHHHCCCCCCEEHHHHCCCCCHHHHHHCCHHHH LGRGDMLFYPVGESKPQRVQGAFISEEEVEHVVSFIKESQRDAQYEEDILEHINSATIAS HCCCCEEEEECCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCEEEC EGNGDGDRDELLDEAIEIVVESGQASASYLQRRLRIGFNRAARIIEELEECGVISRRDGS CCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCHHHHHHHHHHHHHCCCEECCCCC KPRQVLLSKDELENMK CHHHHHCCHHHHCCCH >Mature Secondary Structure AGGKKKTATKTQKKKNQSQIKVTEEIYALIAICVSLIVMFSLYTDKAGYLSVISRTLLI CCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH GLFGIGAFFIPIYIIYLCTKLFLFKREVLFSRIGLGITIALITSVLLIQTVNINDYYVQG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHEEECCCEEEEEE SIWGSIKTIWHSQSEWHGGVVGFLIVLPLYKLVGKIGLFVIFVTLYLISSMLIFDYNLVS EECHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH IRNFFGGFKEKASKVKFVDKKYEKDDYINLKKKDGASEGNKESKKDDISEDNNKIKILDF HHHHHCHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEE MKNSSLNDIEDNKKEKDNQLKDNIKINDFKQESKMPRDLSLDNTIIEQRGFNSEKAKEEE ECCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCHHHHHHCCCCCHHHHHHH SIDKEISNNIASKGSSVGASYVAPNADLLNLNNNNELDKDDKKALLANAAKLEETLMSFG HHHHHHHHHHHHCCCCCCCHHCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCC VEAKILQVTKGPSVTRFELQPKAGIKVSKIVNLADDIALGLAAKGVRIEAPIPGKSAIGI CCEEEEEEECCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCEEEE EVPNKEQTPVFFREIVESKEFLDNKFKVACALGKDITGKAVVTDLSKMPHVLIAGATGSG ECCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHCCCEEEEECCCCC KSVCINTLIVSILYKYSPDEVKLLMIDPKVVELNVYNGIPHLLIPVVTDPKKAAAALNWA CHHHHHHHHHHHHHHCCCCCEEEEEECCEEEEEEECCCCCCEEEEEECCCHHHHHHHHHH VNEMTRRYKLFADNGVRNIESYNALYNKGEVPEKLPYIVIIVDELADLMMACPHDVEDYI HHHHHHHHHHEECCCCHHHHHHHHHHCCCCCCCCCCEEEEEHHHHHHHHHHCCCCHHHHH CRLAQMARAAGMHLVIATQRPSVDVITGVIKANIPSRISFAVSSQIDSRTILDSAGAEKL HHHHHHHHHCCCEEEEEECCCCHHHHHHHHHCCCCCCEEHHHHCCCCCHHHHHHCCHHHH LGRGDMLFYPVGESKPQRVQGAFISEEEVEHVVSFIKESQRDAQYEEDILEHINSATIAS HCCCCEEEEECCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCEEEC EGNGDGDRDELLDEAIEIVVESGQASASYLQRRLRIGFNRAARIIEELEECGVISRRDGS CCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCHHHHHHHHHHHHHCCCEECCCCC KPRQVLLSKDELENMK CHHHHHCCHHHHCCCH
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11792842